DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lip1 and Lipn

DIOPT Version :9

Sequence 1:NP_001285811.1 Gene:Lip1 / 43973 FlyBaseID:FBgn0023496 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001178884.1 Gene:Lipn / 499345 RGDID:1560354 Length:398 Species:Rattus norvegicus


Alignment Length:369 Identity:126/369 - (34%)
Similarity:189/369 - (51%) Gaps:28/369 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LSVDKLIAKYGYESEVHHVTTEDGYILTMHRI---RKQGA-----PPFLLQHGLVDSSAGFVVMG 122
            ::..::|...||.||.:.|||.|||||.::||   |.|..     |...:||.|...:|.::...
  Rat    34 MNASEIITYNGYPSEEYDVTTADGYILAINRIPHGRGQTGHAGPRPVVYMQHALFADNAYWLENF 98

  Fly   123 PNVSLAYLLADHNYDVWLGNARGNRYSRNHTTLDPDESKFWDFSWHEIGMYDLPAMIDHVLKVTG 187
            ||.||.:||||..||||:||:|||.:||.|.||..:|.|||.||:.|:..||||.:||.::..||
  Rat    99 PNGSLGFLLADAGYDVWMGNSRGNTWSRRHKTLSVNEEKFWAFSFDEMAKYDLPGIIDFIVNKTG 163

  Fly   188 FPKLHYAGHSQGCTSFFVMCSMRPAYNDKVVSMQALAPAVYAKETEDHPYIRAISLYFNSLVGSS 252
            ..||::.|||.|.|..|:..|..|....::....||.|.:..|      |..:|...|..|..|.
  Rat   164 QEKLYFIGHSLGTTIGFIAFSTMPELAQRIKMNFALGPVISFK------YPTSIFTSFFLLPRSM 222

  Fly   253 IREMFNGEFRFL----CRMTEET-------ERLCIEAVFGIVGRNWNEFNRKMFPVILGHYPAGV 306
            |:.||..:..||    .:|:..|       ..:|.|.:....|.|....|.....|.:.|.|.|.
  Rat   223 IKLMFGTKGFFLEDKNAKMSYVTVCNKKLLRPMCSEFMSLWAGFNKKNMNMSRLDVYMSHAPTGS 287

  Fly   307 AAKQVKHFIQIIKSGRFAPYSYSSN-KNMQLYRDHLPPRYNLSLVTVPTFVYYSTNDLLCHPKDV 370
            :.:.:.|..|:.:|..|..|.:.|. :||..|....||.|:|:.:.|||.::...:|:|..|:||
  Rat   288 SIQNILHIKQLYQSDEFRAYDWGSEAENMNHYNQSRPPLYDLTAMKVPTAIWAGGHDVLVTPQDV 352

  Fly   371 ESMCDDLGNVTGKYLVPQKEFNHMDFLWAIDVRKMLYRRMLQVL 414
            ..:...:.|:  :|.....|:||.||:|.:|..:.||.:::.::
  Rat   353 ARILPQITNL--RYFKQFPEWNHFDFVWGLDAPQRLYSKIIGLM 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip1NP_001285811.1 Abhydro_lipase 71..122 CDD:282003 22/58 (38%)
Abhydrolase_1 103..399 CDD:278959 105/307 (34%)
LipnNP_001178884.1 Abhydro_lipase 37..97 CDD:282003 22/59 (37%)
Abhydrolase_1 79..379 CDD:278959 105/307 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335521
Domainoid 1 1.000 229 1.000 Domainoid score I2382
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 272 1.000 Inparanoid score I2916
OMA 1 1.010 - - QHG55134
OrthoDB 1 1.010 - - D408561at33208
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11005
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X80
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.010

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