DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lip1 and Lip3

DIOPT Version :10

Sequence 1:NP_523540.1 Gene:Lip1 / 43973 FlyBaseID:FBgn0023496 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_477331.1 Gene:Lip3 / 41643 FlyBaseID:FBgn0023495 Length:394 Species:Drosophila melanogaster


Alignment Length:420 Identity:151/420 - (35%)
Similarity:211/420 - (50%) Gaps:58/420 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLLLGLCVFISRIQGQLIGGEEDEEDEEEEEEEEESVEDETPEDRLQRKNIKQDSTLSVDKLIAK 74
            :||:||        |.::.|.....|..|.      :||:                         
  Fly    10 ILLVGL--------GLVLAGSRPISDCGER------IEDD------------------------- 35

  Fly    75 YGYESEVHHVTTEDGYILTMHRI-------RKQGAPPFLLQHGLVDSSAGFVVMGPNVSLAYLLA 132
             ||..|.|.|.|.|.||||||||       .....|...|.||::.||:.:|:|||..||||:||
  Fly    36 -GYPMERHEVVTSDNYILTMHRIPYSPKTGESSNRPVAFLMHGMLSSSSDWVLMGPERSLAYMLA 99

  Fly   133 DHNYDVWLGNARGNRYSRNHTTLDPDESKFWDFSWHEIGMYDLPAMIDHVLKVTGFPKLHYAGHS 197
            |..||||:||||||.||:.|.........||:|||:||||||:|||||:||..||..::.|.|||
  Fly   100 DAGYDVWMGNARGNTYSKAHKYWPTYWQIFWNFSWNEIGMYDVPAMIDYVLAKTGQQQVQYVGHS 164

  Fly   198 QGCTSFFVMCSMRPAYNDKVVSMQALAPAVYAKETEDHPYIRAISLYF---NSLVG--SSIREMF 257
            ||.|.:.||.|.||.||||:.|...|.||.|....:. |..||.:...   |::|.  .|:..|.
  Fly   165 QGTTVYLVMVSERPEYNDKIKSAHLLGPAAYMGNMKS-PLTRAFAPILGQPNAIVEVCGSMEFMP 228

  Fly   258 NGEFR-----FLCRMTEETERLCIEAVFGIVGRNWNEFNRKMFPVILGHYPAGVAAKQVKHFIQI 317
            :.:|:     .:|:.|.....:|...:|.|.|.:..:.:.::...|....|||.:..|..||.|.
  Fly   229 SNKFKQDLGIEMCQATSPYADMCANEIFLIGGYDTEQLDYELLEHIKATSPAGASVNQNLHFCQE 293

  Fly   318 IKSGRFAPYSYSSNKNMQLYRDHLPPRYNLSLVTVPTFVYYSTNDLLCHPKDVESMCDDLGNVTG 382
            ..||:|..:.|::.:|...|..:.||.|.|.....|..:||..||.:|...||..:.|:|.|:..
  Fly   294 YNSGKFRKFDYTALRNPYEYGSYFPPDYKLKNAKAPVLLYYGANDWMCDVSDVRKLRDELPNMAL 358

  Fly   383 KYLVPQKEFNHMDFLWAIDVRKMLYRRMLQ 412
            .||||.:::.|:||:|..:.||.:|..:|:
  Fly   359 DYLVPFEKWAHLDFIWGTEARKYVYDEVLK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip1NP_523540.1 PLN02872 70..412 CDD:215470 140/358 (39%)
Lip3NP_477331.1 PLN02872 26..392 CDD:215470 145/396 (37%)

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