DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip1 and CG18302

DIOPT Version :9

Sequence 1:NP_001285811.1 Gene:Lip1 / 43973 FlyBaseID:FBgn0023496 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_609420.1 Gene:CG18302 / 34452 FlyBaseID:FBgn0032266 Length:406 Species:Drosophila melanogaster


Alignment Length:433 Identity:165/433 - (38%)
Similarity:228/433 - (52%) Gaps:48/433 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CSLRMQLLLLLGLCVFISRIQGQLIGGEEDEEDEEEEEEEEESVEDETPEDRLQRKNIKQDSTLS 67
            |.|.....:|:.|.:|.....|.||..:                           |.|.:|:.|.
  Fly     5 CHLNYCYGILISLFIFCDTASGDLIKVD---------------------------KTILEDANLI 42

  Fly    68 VDKLIAKYGYESEVHHVTTEDGYILTMHRIRKQGAPPFLLQHGLVDSSAGFVVMGPNVSLAYLLA 132
            ...||.||||.:|.|.:..:||::||.|||.|.|..|.||.|||:|||..:|::||..||.:||:
  Fly    43 TPDLIKKYGYPAETHKIQAKDGFVLTAHRIPKPGGQPVLLVHGLLDSSVAYVILGPERSLGFLLS 107

  Fly   133 DHNYDVWLGNARGNRYSRNHTTLDPDESKFWDFSWHEIGMYDLPAMIDHVL-KVTGFPKLHYAGH 196
            |..|||||.|.|||||||.|......:.:|||||:||:|:|||||.||:|| :...|.::||.||
  Fly   108 DMGYDVWLLNTRGNRYSRKHKRYHRYQPQFWDFSFHELGVYDLPAAIDYVLARSKDFEQIHYVGH 172

  Fly   197 SQGCTSFFVMCSMRPAYNDKVVSMQALAPAVYAKETEDHPYIRAISLYFNSLVGSSIREMFNGEF 261
            |||.||||||.|.|.||..|:..||||||.|: .:..|.|.|.....|...||  .|...| |.:
  Fly   173 SQGTTSFFVMGSERSAYMKKIKLMQALAPVVF-WDYIDSPIILTFVKYLRPLV--FIARSF-GIY 233

  Fly   262 RF-------------LCRMTEETERLCIEAVFGIVGRNWNEFNRKMFPVILGHYPAGVAAKQVKH 313
            .|             :|...  .:..|...:...:|.::.:||..:.|:..||..:|.:.|.::|
  Fly   234 EFPPENEVWRSLIHKICSFV--FQNTCTYFLMEAMGVDYAQFNSSLLPLFTGHASSGSSVKSLEH 296

  Fly   314 FIQIIKSGRFAPYSYSSN-KNMQLYRDHLPPRYNLSLVTVPTFVYYSTNDLLCHPKDVESMCDDL 377
            :.|.|.||.|..|:|.|. :|.:.:....||:|.|:.|.....:|||.||.|...|||..:.|.|
  Fly   297 YGQQIHSGGFFKYNYYSTWENRRNHGVDTPPQYKLTNVDCKVALYYSRNDRLTSDKDVVRLRDIL 361

  Fly   378 GNVTGKYLVPQKEFNHMDFLWAIDVRKMLYRRMLQVLGKVPEG 420
            .||...|:.|...:||::|:|..||:.:|..||::::.||..|
  Fly   362 PNVVLDYMFPDPLYNHINFIWGNDVKTVLNDRMIELMRKVDNG 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip1NP_001285811.1 Abhydro_lipase 71..122 CDD:282003 27/50 (54%)
Abhydrolase_1 103..399 CDD:278959 127/310 (41%)
CG18302NP_609420.1 PLN02872 13..399 CDD:215470 160/418 (38%)
Abhydro_lipase 43..97 CDD:282003 27/53 (51%)
Abhydrolase_5 79..>208 CDD:289465 74/129 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438251
Domainoid 1 1.000 150 1.000 Domainoid score I1414
eggNOG 1 0.900 - - E2759_KOG2624
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 194 1.000 Inparanoid score I1354
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D39202at50557
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 1 1.000 - - mtm1092
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11005
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X80
109.900

Return to query results.
Submit another query.