DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lip1 and SPOM_SPCC1672.09

DIOPT Version :10

Sequence 1:NP_523540.1 Gene:Lip1 / 43973 FlyBaseID:FBgn0023496 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_587880.1 Gene:SPOM_SPCC1672.09 / 2539344 PomBaseID:SPCC1672.09 Length:467 Species:Schizosaccharomyces pombe


Alignment Length:410 Identity:124/410 - (30%)
Similarity:186/410 - (45%) Gaps:45/410 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LQRKNIKQDSTLSVDKLIAKYGYESEVHHVTTEDGYILTMHRIRKQG-----------APPFLLQ 108
            |||.....|:. .:.::....||..|.|.|.|||.|||.:|||.|..           .|.....
pombe    69 LQRAKAIHDAA-DIREMCKISGYYVEDHLVRTEDDYILCIHRISKDSPGRIGSPHPKKLPVVYCH 132

  Fly   109 HGLVDSSAGFVV-MGPNVSLAYLLADHNYDVWLGNARGNRYSRNHTTLDPDESKFWDFSWHEIGM 172
            |||:.:|..:|. :.|...|.:.|.:..|||||||.|||:|||.|...|..:.:|||||..:...
pombe   133 HGLLMNSEVWVCNVDPRNCLVFDLVNKGYDVWLGNNRGNKYSRQHLRFDSTDKEFWDFSIDDFAQ 197

  Fly   173 YDLPAMIDHVLKVTGFPKLHYAGHSQGCTSFFVMCSMRPAYNDKVVSMQALAPAVYAKETEDH-- 235
            ||:|..||::||.:|..||.|.|.|||....|...|:.|..|||:.|:.|||||:..|...:.  
pombe   198 YDIPDTIDYILKTSGQTKLTYIGFSQGTAQAFASLSIHPLLNDKINSLIALAPAISPKGLHNRVV 262

  Fly   236 -PYIRA-ISLYFNSLVGSSIREMFNGEFRFLC-RMTEETERLCIEAVFGIVGRNWNEFNRKMFP- 296
             .:::| .|:.|......||.........||. :..:.....|:..:|     ||:..|...:. 
pombe   263 DAFVKARPSILFFLFGRKSILPSAGFWQSFLAPKFFDAVLAYCLSQLF-----NWSCQNISSYQR 322

  Fly   297 -VILGHYPAGVAAKQVKHFIQIIKSGRFAPYSYSSNKNMQLYRDHLPPRYNLSL-----VTVPTF 355
             |...|..:..:.|.:.|:.||::|..|..|.     |.||..|:....|..:.     :..|.:
pombe   323 LVSFAHLYSYTSVKCLVHWFQIMRSAEFRMYD-----NDQLGHDYFLKYYKAAKFPTNNIRTPIY 382

  Fly   356 VYYSTNDLLCHPKDVESMCDDLGNVTGKYLVPQKEFNHMDFLWAIDVRKMLYRRMLQVLGKV--- 417
            :.:..:|.|.   |:::|.:.|......  |....:.|:|.:||..|:..:...:|:.|..:   
pombe   383 LIWGGSDSLV---DIQAMLNALPAEVEH--VKVDSYEHLDMIWADTVKDYVIPPVLRRLRDIHHP 442

  Fly   418 PEGSPEEANRSRREIRGKFI 437
            ||  .||.::..|||:...|
pombe   443 PE--HEENDKENREIQKNHI 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip1NP_523540.1 PLN02872 70..412 CDD:215470 110/365 (30%)
SPOM_SPCC1672.09NP_587880.1 PLN02872 83..437 CDD:215470 111/368 (30%)

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