DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip1 and lipl-1

DIOPT Version :9

Sequence 1:NP_001285811.1 Gene:Lip1 / 43973 FlyBaseID:FBgn0023496 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_506229.1 Gene:lipl-1 / 179771 WormBaseID:WBGene00010062 Length:405 Species:Caenorhabditis elegans


Alignment Length:377 Identity:126/377 - (33%)
Similarity:196/377 - (51%) Gaps:36/377 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LSVDKLIAKYGYESEVHHVTTEDGYILTMHRI------------RKQGAPPFLLQHGLVDSSAGF 118
            ::..::|.::||.:.::.|||||||||.:|||            :|   |...:||||..||:.:
 Worm    29 MTTPQIIMRWGYPAMIYDVTTEDGYILELHRIPYGKTNVTWPNGKK---PVVFMQHGLECSSSNW 90

  Fly   119 VVMGPNVSLAYLLADHNYDVWLGNARGNRYSRNHTTLDPDESKFWDFSWHEIGMYDLPAMIDHVL 183
            ||..|..|.|:|.||..|||||||.|||.||..|..|.|..|.|||:||.|:..|||||||:..|
 Worm    91 VVNLPTESAAFLFADAGYDVWLGNFRGNTYSMKHKNLKPSHSAFWDWSWDEMQQYDLPAMIEKAL 155

  Fly   184 KVTGFPKLHYAGHSQGCTSFFVMCSM-RPAYNDKVVSMQALAPAVYAKETEDHPYIRAISLYFNS 247
            :|||...|:|.|||||..:.|...|. :..:.:|:....||||....|..:.  .::..:.|| |
 Worm   156 EVTGQDSLYYIGHSQGTLTMFSRLSEDKVGWGNKIKKFFALAPVGSVKHIKG--ALKFFADYF-S 217

  Fly   248 LVGSSIREMF-NGEF---RFLCRMTEET--------ERLCIEAVFGIVGRNWNEFNRKMFPVILG 300
            |......::| :|||   .::.::..|:        ..:|.:.:|.|.|...|:.|....|:.:.
 Worm   218 LEFDGWFDVFGSGEFLPNNWIMKLVSESVCAGLKVEAGVCDDVMFLIAGPESNQLNATRVPIYVA 282

  Fly   301 HYPAGVAAKQVKHFIQIIKSGRFAPYSYSSNKNMQLYRDHLPPRYNLSLVTVPTFVYYSTNDLLC 365
            |.|||.:.:.:.|:||:::.|....|.|....|.:.|.....|.|:.:.|..|.::|:..:|.|.
 Worm   283 HTPAGTSTQNIVHWIQMVRHGGTPKYDYGEKGNKKHYGQANVPAYDFTTVNRPVYLYWGDSDWLA 347

  Fly   366 HPKDVESMCDDLGNVTGKYLVPQK---EFNHMDFLWAIDVRKMLYRRMLQVL 414
            .|.||....  |.::....:|...   ::||:||:|.:...|.:|..::.::
 Worm   348 DPTDVTDFL--LTHLNPSTVVQNNKLIDYNHLDFIWGLRAPKDIYEPIIDIV 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip1NP_001285811.1 Abhydro_lipase 71..122 CDD:282003 25/62 (40%)
Abhydrolase_1 103..399 CDD:278959 107/311 (34%)
lipl-1NP_506229.1 PLN02872 33..398 CDD:215470 126/373 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156623
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2624
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55134
OrthoDB 1 1.010 - - D408561at33208
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11005
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X80
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.860

Return to query results.
Submit another query.