DRSC/TRiP Functional Genomics Resources

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Protein Alignment spag and TPR14

DIOPT Version :10

Sequence 1:NP_524664.1 Gene:spag / 43958 FlyBaseID:FBgn0015544 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_201320.1 Gene:TPR14 / 836639 AraportID:AT5G65160 Length:593 Species:Arabidopsis thaliana


Alignment Length:167 Identity:41/167 - (24%)
Similarity:75/167 - (44%) Gaps:4/167 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LPVRSHVQTDKSR-KESPSSSAASSPTEKQDLPVDPVAQQYKKANDIKDRGNTYVKQGEYEKAIV 117
            |.||:.|.....| .|:..:...:...:..:..|..::::.:...:.:.:||...|.|.:::|..
plant   427 LVVRAQVHLASGRFDEAVEAIQRAGKLDGNNREVIMISRRAQAVTEARFKGNELFKSGRFQEACA 491

  Fly   118 AYSTAIAVYPHDPIYHINRALCYLKQESFDQCVEDCEAAIALDKLCVKAYYRRMQANESLGNNME 182
            ||...:...|.:.:...|||.|..|...||:.:|||.||:::.....||..||...|..:.....
plant   492 AYGEGLDHDPRNSVLLCNRAACRSKLGQFDKSIEDCTAALSVRPGYGKARLRRADCNAKIEKWEL 556

  Fly   183 ALKDCTTVLAIEPKNIEAKRSLARINDRLRKIATKSG 219
            |:.|...:....|::.:..|.|:....:|.|   :||
plant   557 AVGDYEILKKESPEDEQVIRGLSEAQQQLMK---RSG 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spagNP_524664.1 TPR repeat 96..124 CDD:276809 7/27 (26%)
TPR 102..>211 CDD:440225 30/108 (28%)
TPR repeat 129..159 CDD:276809 12/29 (41%)
TPR repeat 164..192 CDD:276809 7/27 (26%)
PLN03209 <296..416 CDD:178748
RPAP3_C 416..503 CDD:464012
TPR14NP_201320.1 TPR 235..>328 CDD:440225
TPR repeat 236..264 CDD:276809
TPR repeat 269..299 CDD:276809
NrfG 288..466 CDD:443378 7/38 (18%)
TPR repeat 304..329 CDD:276809
TPR 423..>585 CDD:440225 37/157 (24%)
TPR repeat 503..533 CDD:276809 12/29 (41%)
TPR repeat 538..562 CDD:276809 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.

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