DRSC/TRiP Functional Genomics Resources

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Protein Alignment spag and TPR13

DIOPT Version :10

Sequence 1:NP_524664.1 Gene:spag / 43958 FlyBaseID:FBgn0015544 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_196571.1 Gene:TPR13 / 830873 AraportID:AT5G10090 Length:594 Species:Arabidopsis thaliana


Alignment Length:128 Identity:38/128 - (29%)
Similarity:59/128 - (46%) Gaps:0/128 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 VDPVAQQYKKANDIKDRGNTYVKQGEYEKAIVAYSTAIAVYPHDPIYHINRALCYLKQESFDQCV 150
            |..|.::.:.....:.|||.:.|.|.:::|..||...:.....:.:...|||.|..|...||:.|
plant   461 VSMVLRRAQAVTAARSRGNDFFKAGRFQEACTAYGEGLDHDSRNSVLLCNRAACLSKMGQFDRAV 525

  Fly   151 EDCEAAIALDKLCVKAYYRRMQANESLGNNMEALKDCTTVLAIEPKNIEAKRSLARINDRLRK 213
            ||..||:|:.....||..||...|..|||...|:.|...:....|::.|..:.|:....:|.|
plant   526 EDTSAALAVRPGYTKARLRRADCNAKLGNWESAVGDYEILRKETPEDEEVIKGLSEAQKQLVK 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spagNP_524664.1 TPR repeat 96..124 CDD:276809 8/27 (30%)
TPR 102..>211 CDD:440225 34/108 (31%)
TPR repeat 129..159 CDD:276809 12/29 (41%)
TPR repeat 164..192 CDD:276809 10/27 (37%)
PLN03209 <296..416 CDD:178748
RPAP3_C 416..503 CDD:464012
TPR13NP_196571.1 TPR repeat 237..265 CDD:276809
TPR repeat 270..300 CDD:276809
LapB 280..568 CDD:442196 33/106 (31%)
TPR repeat 305..331 CDD:276809
TPR 432..>586 CDD:440225 36/124 (29%)
TPR repeat 473..499 CDD:276809 8/25 (32%)
TPR repeat 504..534 CDD:276809 12/29 (41%)
TPR repeat 539..563 CDD:276809 10/23 (43%)
Blue background indicates that the domain is not in the aligned region.

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