DRSC/TRiP Functional Genomics Resources

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Protein Alignment spag and Phox4

DIOPT Version :10

Sequence 1:NP_524664.1 Gene:spag / 43958 FlyBaseID:FBgn0015544 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001320111.1 Gene:Phox4 / 829338 AraportID:AT4G32070 Length:782 Species:Arabidopsis thaliana


Alignment Length:527 Identity:109/527 - (20%)
Similarity:186/527 - (35%) Gaps:145/527 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 KANDIKDRGNTYVKQGEYEKAIVAYSTAIAVYPHDPI----YHINRALCYLKQ--ESFDQCVEDC 153
            :|.::|:.||...::.::|.|::::..|:.:.|.|.|    ...:.|.||::.  ..:...:.:|
plant    50 RALELKEEGNKLFQKRDHEGAMLSFDKALKLLPKDHIDVAYLRTSMASCYMQMGLGEYPNAISEC 114

  Fly   154 EAAIALDKLCVKAYYRRMQANESLGNNMEALKDCTTVLAIEPKNIEAKRSLARINDRLRKIATKS 218
            ..|:.......||..||.:..|:|.....|.:|...||.:||.|:.|.    .|.||::|:....
plant   115 NLALEASPRYSKALVRRSRCYEALNKLDYAFRDARIVLNMEPGNVSAN----EIFDRVKKVLVDK 175

  Fly   219 GPNFTPDRPGMIEILP--------IEKPAYKRSKKAMRS--------VPVVDVVSPRATIDDSNQ 267
            |.:........:::.|        |.|...::|||..:|        .|.|.||......:..|:
plant   176 GIDVDEMEKDFVDVQPVCAARLKKIVKERLRKSKKKKKSGGKDEELKSPKVVVVDKGDEAEGRNK 240

  Fly   268 LRISDEDIDKI-FNSNCGIIEEVKKTNPK--------------------------------PTPM 299
            .:  :|..||. .:...|...|.|||:.|                                .:.:
plant   241 PK--EEKSDKSDIDGKIGGKREEKKTSFKSDKGQKKKSGGNKAGEERKVEDKVVVMDKEVIASEI 303

  Fly   300 PDTSGPPK-AETIAKTSKEVK---------PTKQTAVKVAPAVETP---------KETETRKDTK 345
            .|..|..| ..|:.:|.|.|.         |...|...|...:...         |..:|..|..
plant   304 VDGGGSKKEGATVTRTIKLVHGDDIRWAQLPLDSTVRLVRDVIRDRFPALRGFLIKYRDTEGDLV 368

  Fly   346 IVPESDNEAKPSAPKKTAVEVPKVQTQVSPPKTTIERSPEV----NTVQTEKIEQASSNNAMSPS 406
            .:..:|.....::.......:.....:|:|     ::.|..    ||..|:|:.:..|:.|.:.|
plant   369 TITTTDELRLAASTHDKLGSLRLYIAEVNP-----DQEPTYDGMSNTESTDKVSKRLSSLADNGS 428

  Fly   407 PIERFLPPAPTSTAQFHVTWKELSGP------QKYQYLKSIEVPNLCKILGAGFDSDTFADLLRT 465
            ..|             :|...:.||.      |..|..|:          ..|||||::.||   
plant   429 VGE-------------YVGSDKASGCFENWIFQFAQLFKN----------HVGFDSDSYVDL--- 467

  Fly   466 IHD----FFVPNKEP----NTAAVLLEIS--KNDEFTILAML------MSAEEKKMV-------S 507
             ||    .:....|.    ..|..|.:|:  |..|...||:|      ||...|::.       .
plant   468 -HDLGMKLYTEAMEDAVTGEDAQELFQIAADKFQEMGALALLNWGNVHMSKARKQVCIPEDASRE 531

  Fly   508 SILNAIK 514
            :|:.|::
plant   532 AIIEAVE 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spagNP_524664.1 TPR repeat 96..124 CDD:276809 7/27 (26%)
TPR 102..>211 CDD:440225 29/114 (25%)
TPR repeat 129..159 CDD:276809 7/35 (20%)
TPR repeat 164..192 CDD:276809 9/27 (33%)
PLN03209 <296..416 CDD:178748 25/142 (18%)
RPAP3_C 416..503 CDD:464012 26/108 (24%)
Phox4NP_001320111.1 TPR 40..>161 CDD:440225 28/110 (25%)
TPR repeat 51..79 CDD:276809 7/27 (26%)
TPR repeat 84..120 CDD:276809 7/35 (20%)
TPR repeat 125..152 CDD:276809 8/26 (31%)
PB1 317..393 CDD:214770 10/75 (13%)
P5CR_dimer 474..553 CDD:464294 14/65 (22%)
TPR repeat 504..534 CDD:276809 6/29 (21%)
FAT 535..>625 CDD:396714 1/4 (25%)
TPR_11 545..578 CDD:315977
TPR repeat 566..589 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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