DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spag and Phox1

DIOPT Version :10

Sequence 1:NP_524664.1 Gene:spag / 43958 FlyBaseID:FBgn0015544 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_180101.4 Gene:Phox1 / 817067 AraportID:AT2G25290 Length:745 Species:Arabidopsis thaliana


Alignment Length:472 Identity:97/472 - (20%)
Similarity:176/472 - (37%) Gaps:99/472 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 KANDIKDRGNTYVKQGEYEKAIVAYSTAIAVYPHD----PIYHINRALCYLKQ--ESFDQCVEDC 153
            :|.::|:.||...::.:||.|:..|..|:.:.|.|    .....:.|.||::.  ..:...:.:|
plant    51 RALELKEEGNKLFQKRDYEGAMFRYDKAVKLLPRDHGDVAYLRTSMASCYMQMGLGEYPNAINEC 115

  Fly   154 EAAIALDKLCVKAYYRRMQANESLGNNMEALKDCTTVLAIEPKNIEAKRSLARINDRLRKIATKS 218
            ..|:.......||..:|.:..|:|.....|.:|...||.:||:|:.|.    .|.:|::|:....
plant   116 NLALEASPRFSKALLKRARCYEALNKLDFAFRDSRVVLNMEPENVSAN----EIFERVKKVLVGK 176

  Fly   219 GPNFTPDRPGMIEILP---------IEKPAYKRSKKAMRSV--------PVVDVVSPRATIDDSN 266
            |.:.......::.:.|         :::...|:.||:|...        ..|:.|...|.:|:. 
plant   177 GIDVDEMEKNLVNVQPVGAARLRKIVKERLRKKKKKSMTMTNGGNDGERKSVEAVVEDAKVDNG- 240

  Fly   267 QLRISDEDIDKIFNSNCGIIEEVKKTNPKPTPMPD---TSGPPKAETIAKTSKEVK--------- 319
                  |::|   :...|...|.||...|...|..   .|...:..|:.:|.|.|.         
plant   241 ------EEVD---SGRKGKAIEEKKLEDKVAVMDKEVIASEIKEDATVTRTVKLVHGDDIRWAQL 296

  Fly   320 PTKQTAVKVAPAVETP---------KETETRKDTKIVPESDNEAKPSAPKKTAVEVPKVQTQVSP 375
            |...:.|.|...::..         |..::..|...:..:|.....::.::..........:|||
plant   297 PLDSSVVLVRDVIKDRFPALKGFLIKYRDSEGDLVTITTTDELRLAASTREKLGSFRLYIAEVSP 361

  Fly   376 PKTTIERSPEV--NTVQTEKIEQASSNNAMSPSPIERFLPPAPTSTAQFHVTWKELSGPQKYQYL 438
            .:   |.:.:|  |...|:|..:.||:.|.:.| :..|:.....||:..|..:      |..|..
plant   362 NQ---EPTYDVIDNDESTDKFAKGSSSVADNGS-VGDFVESEKASTSLEHWIF------QFAQLF 416

  Fly   439 KSIEVPNLCKILGAGFDSDTFADLLRTIHDFFVPNKEP----NTAAVLLEISKNDEFTILAMLMS 499
            |:          ..|||||::.:|.......:....|.    ..|..|.:|:. |:|..:|.|  
plant   417 KN----------HVGFDSDSYLELHNLGMKLYTEAMEDIVTGEDAQELFDIAA-DKFQEMAAL-- 468

  Fly   500 AEEKKMVSSILNAIKNW 516
                        |:.||
plant   469 ------------AMFNW 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spagNP_524664.1 TPR repeat 96..124 CDD:276809 9/27 (33%)
TPR 102..>211 CDD:440225 28/114 (25%)
TPR repeat 129..159 CDD:276809 6/35 (17%)
TPR repeat 164..192 CDD:276809 8/27 (30%)
PLN03209 <296..416 CDD:178748 25/142 (18%)
RPAP3_C 416..503 CDD:464012 20/90 (22%)
Phox1NP_180101.4 TPR repeat 52..80 CDD:276809 9/27 (33%)
TPR 59..>162 CDD:440225 26/102 (25%)
TPR repeat 85..121 CDD:276809 6/35 (17%)
PB1 280..356 CDD:214770 9/75 (12%)

Return to query results.
Submit another query.