DRSC/TRiP Functional Genomics Resources

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Protein Alignment spag and stip1

DIOPT Version :10

Sequence 1:NP_524664.1 Gene:spag / 43958 FlyBaseID:FBgn0015544 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001007767.1 Gene:stip1 / 493606 ZFINID:ZDB-GENE-041121-17 Length:542 Species:Danio rerio


Alignment Length:313 Identity:74/313 - (23%)
Similarity:125/313 - (39%) Gaps:66/313 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EKAFELQRQVRQNAREYENS---VKDLYSWEQDIKNKEKELQKSPLSAANKDLPVRSHVQTDKSR 66
            |||.::.|:.|::.|:...:   :.:.|..::..|...:...||.......|: ::...:.:|..
Zfish   282 EKAIDVGRENREDYRQIAKAYARIGNSYFKQEKYKEAVQFFNKSLTEHRTPDV-LKKCQEAEKIL 345

  Fly    67 KESPSSSAASSPTEKQDLPVDPVAQQYKKANDIKDRGNTYVKQGEYEKAIVAYSTAIAVYPHDPI 131
            ||. ...|..:|    ||.::.           |::||...::|:|..|:..||.||...|:|..
Zfish   346 KEQ-EKVAYINP----DLALEE-----------KNKGNDAFQKGDYPLAMKHYSEAIKRNPYDAK 394

  Fly   132 YHINRALCYLKQESFDQCVEDCEAAIALDKLCVKAYYRRMQANESLGNNMEALKDCTTVLAIEPK 196
            ...|||.||.|...|...::|||..|.||...:|.|.|:       |..:||:||.:..:.:..|
Zfish   395 LFSNRAACYTKLLEFQLALKDCEECINLDSTFIKGYTRK-------GAALEAMKDFSKAMDVYQK 452

  Fly   197 NIEAKRSLARINDRLRKIATKSGPNFTPDRPGMIEILPIEKPAYKRSKKAMRSVPVVDVVSPRAT 261
            .:|...:.....:.|::...                           .:|||:....| |..||.
Zfish   453 ALELDSNSKEATEGLQRCMV---------------------------SQAMRNDSPED-VKRRAM 489

  Fly   262 IDDSNQLRISDEDIDKIFNSNCGIIEEVKKTNPKPTPMPD-TSGPPKAETIAK 313
            .|...|..:||..:..       |:|:::|   .|..:.| ...|..|:.|.|
Zfish   490 ADPEVQQIMSDPAMRM-------ILEQMQK---DPQALSDHLKNPVIAQKIQK 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spagNP_524664.1 TPR repeat 96..124 CDD:276809 9/27 (33%)
TPR 102..>211 CDD:440225 34/108 (31%)
TPR repeat 129..159 CDD:276809 12/29 (41%)
TPR repeat 164..192 CDD:276809 8/27 (30%)
PLN03209 <296..416 CDD:178748 6/19 (32%)
RPAP3_C 416..503 CDD:464012
stip1NP_001007767.1 Spy 1..>105 CDD:443119
TPR repeat 7..32 CDD:276809
TPR repeat 37..67 CDD:276809
TPR repeat 72..100 CDD:276809
STI1 131..184 CDD:436075
TPR repeat 228..252 CDD:276809
TPR 230..469 CDD:440225 54/210 (26%)
TPR repeat 257..287 CDD:276809 3/4 (75%)
TPR repeat 299..326 CDD:276809 3/26 (12%)
TPR repeat 363..387 CDD:276809 9/23 (39%)
TPR repeat 392..422 CDD:276809 12/29 (41%)
TPR repeat 427..455 CDD:276809 9/34 (26%)
STI1 481..535 CDD:436075 17/63 (27%)
Blue background indicates that the domain is not in the aligned region.

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