DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spag and Spag1

DIOPT Version :10

Sequence 1:NP_524664.1 Gene:spag / 43958 FlyBaseID:FBgn0015544 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster


Alignment Length:474 Identity:100/474 - (21%)
Similarity:175/474 - (36%) Gaps:152/474 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAQEKAFELQRQVRQNAREYENSVKDLYSWEQDIKNKE---KELQK------------------ 44
            :....|.|..:.|::|:....:..:|.:..|...||.|:   .||:|                  
  Fly    63 LKPDSKLFRYEEQIKQSTDLDKTELKPILDWTDAIKTKDNALNELKKVKQNLNLPSVRKLSKIDL 127

  Fly    45 ----------------SPLSAANKDLPVRS--------------------HVQTDKSRKESPSSS 73
                            ||.:..||:..::|                    :.:.|:.::|...|:
  Fly   128 EKESKTEKPKPAPKATSPSNTKNKEARIKSTDYRKWDKYDPDEEILRMDLNEERDQEQREKIISN 192

  Fly    74 AASSPT-----EKQDLPVDPVAQQYKKANDIKD---------RGNTYVKQGEYEKAIVAYSTAIA 124
            .:.|.|     .::|...:.:..|.|..:.::.         |||...|..|||.||..|:.:|.
  Fly   193 HSKSVTTDKLQSERDSLYERLQAQLKNLSQLEKEQFAERHRLRGNESFKAKEYENAIEEYNCSII 257

  Fly   125 VYPHDPIY-HINRALCYLKQESFDQCVEDCEAAIALDKLCVKAYYRRMQANESLGNNMEALKDCT 188
            ..|.:.:: :.|||:.:||.:.:...:.||:|.:.:|.:.:||:.|..:|:.:.|.::|:|....
  Fly   258 YDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYK 322

  Fly   189 TVLAIEPKNIEAKRSLARINDRLRKIATKSGPNFTPDRPGMIEILPIEKPAYKRS---KKAMRSV 250
            .:|..||.|..||:::.::...|.::|..|....      :||  .|:.|..|.|   |:|.:|.
  Fly   323 KLLDFEPDNAIAKKAVEKLTSMLGEVAPSSATRL------IIE--EIDPPQLKTSEPKKEAEKSE 379

  Fly   251 PVVDVVSPRATIDDSNQLRISDEDIDKIFNSNCGIIEEVKKTNP-----KPTPMPDTSGPPKAET 310
            |.|                                   |||..|     ||.|:.|..       
  Fly   380 PTV-----------------------------------VKKPEPVVSAKKPPPIKDYD------- 402

  Fly   311 IAKTSKEVKPTKQTAVKVAPAVETPKETETRKDTKIVPESDNEAKPSAPKKTAVEVPKVQTQVSP 375
            :|:..|..:..|...|..|.|:....:.               :|..||||.       |:....
  Fly   403 LAELVKPNRMVKSNLVSAAEALGNKMQA---------------SKGGAPKKP-------QSPPMT 445

  Fly   376 PKTTIERSPEVNTVQTEKI 394
            ||.|:.|.|:.|...:.|:
  Fly   446 PKETLLRLPQDNLNNSNKL 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spagNP_524664.1 TPR repeat 96..124 CDD:276809 10/36 (28%)
TPR 102..>211 CDD:440225 34/109 (31%)
TPR repeat 129..159 CDD:276809 8/30 (27%)
TPR repeat 164..192 CDD:276809 7/27 (26%)
PLN03209 <296..416 CDD:178748 22/99 (22%)
RPAP3_C 416..503 CDD:464012
Spag1NP_651514.1 NlpI <229..373 CDD:443815 43/151 (28%)
TPR repeat 229..257 CDD:276809 10/27 (37%)
TPR repeat 262..293 CDD:276809 8/30 (27%)
TPR repeat 298..326 CDD:276809 7/27 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.