DRSC/TRiP Functional Genomics Resources

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Protein Alignment spag and Tom70

DIOPT Version :10

Sequence 1:NP_524664.1 Gene:spag / 43958 FlyBaseID:FBgn0015544 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_609536.1 Gene:Tom70 / 34618 FlyBaseID:FBgn0032397 Length:589 Species:Drosophila melanogaster


Alignment Length:317 Identity:72/317 - (22%)
Similarity:119/317 - (37%) Gaps:101/317 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SAANKDLPVRSHVQTDKSRKESPSSSAASSPTEKQDLPVDPVA------------------QQYK 94
            :||:|:|         ...|:.|.:.     .|||.:.:|..|                  ...|
  Fly    38 TAASKEL---------DGEKKRPKAK-----IEKQAISLDGTAPDQELERNQKSAELGEKLSPLK 88

  Fly    95 KANDIKDRGNTYVKQGEYEKAIVAYSTAIAVYPHD-----PIYHINRALCYLKQESFDQCVEDCE 154
            :||:.|..||...:.|:|::||..|..||...|.:     .|::.|||..|...:.:....|||.
  Fly    89 EANNYKTEGNNCYRNGKYDEAIKFYDKAIDKCPKEHRTDMAIFYQNRAASYEMLKKWSNVKEDCT 153

  Fly   155 AAIALDKLCVKAYYRRMQANESLGNNMEALKDCTTVLAIEPKNIEAKRSLARINDRLRKIATKSG 219
            |::..:....||||||.:|:|:..:..|.|.|.|....:|   :..........||:.|      
  Fly   154 ASLEFNPRYAKAYYRRARAHEATKDMNECLDDVTATCILE---MFQNNQTIMFADRVLK------ 209

  Fly   220 PNFTPDRPGMIEILPIEKPAYKRSKKAMRS-VPVVDVVSPRAT-IDDSNQLRISDEDIDKIFNSN 282
                  ..|.::           ::|.||: ||||    |.|. ::...:..|:|.         
  Fly   210 ------ETGRLD-----------AEKGMRNRVPVV----PSACFVNTYTRSFIADP--------- 244

  Fly   283 CGIIEEVKKTNPKPTPMPDTSGPPKA--------------ETIAKTSKEVKPTKQTA 325
               ::.:|      .|.|.:..|||.              |.|...::|::.::..|
  Fly   245 ---LQTMK------VPAPKSDAPPKGFLRAHLAFLEEKYEEIIPACTEEIESSEAEA 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spagNP_524664.1 TPR repeat 96..124 CDD:276809 11/27 (41%)
TPR 102..>211 CDD:440225 33/113 (29%)
TPR repeat 129..159 CDD:276809 9/34 (26%)
TPR repeat 164..192 CDD:276809 12/27 (44%)
PLN03209 <296..416 CDD:178748 9/44 (20%)
RPAP3_C 416..503 CDD:464012
Tom70NP_609536.1 3a0801s09 42..567 CDD:273380 70/313 (22%)
TPR repeat 90..118 CDD:276809 11/27 (41%)
TPR repeat 123..158 CDD:276809 9/34 (26%)
TPR repeat 296..324 CDD:276809
TPR repeat 334..362 CDD:276809
TPR repeat 367..397 CDD:276809
TPR repeat 402..437 CDD:276809
TPR repeat 443..471 CDD:276809
TPR repeat 476..507 CDD:276809
TPR repeat 512..539 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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