DRSC/TRiP Functional Genomics Resources

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Protein Alignment spag and tomm34

DIOPT Version :9

Sequence 1:NP_524664.1 Gene:spag / 43958 FlyBaseID:FBgn0015544 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_955932.2 Gene:tomm34 / 323361 ZFINID:ZDB-GENE-030131-2081 Length:305 Species:Danio rerio


Alignment Length:211 Identity:63/211 - (29%)
Similarity:101/211 - (47%) Gaps:14/211 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AFELQRQVRQNAREYENSVKDLYSW-----EQDIKNKEKELQKSPLSAANKDLPVRSHVQTDKSR 66
            |||...:.||...:|:..::  ..|     ...:....|.|.:....:..:.||....|......
Zfish    95 AFEALERYRQAYVDYKTVLQ--IDWNIPAAHDGVNRMTKALTEMDGPSWREKLPPIPTVPMSVKE 157

  Fly    67 KESPSSSAASSPTEKQDLPVD-----PVAQQYKKANDIKDRGNTYVKQGEYEKAIVAYSTAIAVY 126
            |...::|.|||  .:|:..:|     |.....||...:|:.||..||:||::||:..|:.::|..
Zfish   158 KLGQAASPASS--SQQNNVIDDKKKAPGPDAVKKGRTLKEEGNALVKKGEHKKAMEKYTQSLAQD 220

  Fly   127 PHDPIYHINRALCYLKQESFDQCVEDCEAAIALDKLCVKAYYRRMQANESLGNNMEALKDCTTVL 191
            |.:...:.|||||||..:.:...:.|||.|:.||...:||.|||.||.:.|.|....::|..:||
Zfish   221 PTEVTTYTNRALCYLALKMYKDAIRDCEEALRLDSANIKALYRRAQAYKELKNKKSCIEDLNSVL 285

  Fly   192 AIEPKNIEAKRSLARI 207
            .|:|.|...::.|..:
Zfish   286 KIDPNNTAVQKLLQEV 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spagNP_524664.1 TPR_11 95..161 CDD:290150 25/65 (38%)
TPR repeat 96..124 CDD:276809 10/27 (37%)
TPR_1 102..129 CDD:278916 11/26 (42%)
TPR repeat 129..159 CDD:276809 11/29 (38%)
TPR 130..160 CDD:197478 11/29 (38%)
TPR_16 136..197 CDD:290168 26/60 (43%)
TPR repeat 164..192 CDD:276809 11/27 (41%)
RPAP3_C 415..503 CDD:290588
tomm34NP_955932.2 TPR_11 13..83 CDD:290150
TPR repeat 13..38 CDD:276809
TPR repeat 43..81 CDD:276809
TPR_11 54..116 CDD:290150 6/22 (27%)
TPR repeat 86..114 CDD:276809 6/18 (33%)
TPR_11 191..254 CDD:290150 23/62 (37%)
TPR repeat 191..218 CDD:276809 10/26 (38%)
TPR repeat 223..253 CDD:276809 11/29 (38%)
TPR_11 226..289 CDD:290150 26/62 (42%)
TPR 226..257 CDD:197478 13/30 (43%)
TPR_1 258..291 CDD:278916 14/32 (44%)
TPR repeat 258..286 CDD:276809 11/27 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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