Protein Alignment spag and rpap-3

DIOPT Version :9

• Sequence 1: NP_524664.1
• Gene: spag / 43958
• FlyBaseID: FBgn0015544
• Length: 534
• Species: Drosophila melanogaster
• Sequence 2: NP_501282.1
• Gene: rpap-3 / 183187
• WormBaseID: WBGene00016375
• Length: 297
• Species: Caenorhabditis elegans
• Alignment Length: 426
• Identity: 101/426 - (23%)
• Similarity: 152/426 - (35%)
• Gaps: 152/426 - (35%)

  Fly    91 QQYKKANDIKDRGNTYVKQGEYEKAIVAYSTAIAVYPHDPIYHINRALCYLKQESFDQCVEDCEA 155
            ::.|.|..:|::||...|:.:|.||:..||.::..:| |||...|||...|..:.......||.|
 Worm     3 EEKKIAQRLKEQGNEAFKKKKYHKAMTIYSKSLEHWP-DPIVFSNRAQAGLNADLPLLAQIDCTA 66

  Fly   156 AIALDKLCVKAYYRRMQANESLGNNMEALKDCTTVLAIEPKNIEAKRSLARINDRLRKIATK--S 218
            |:.||....||||||.||.::|                         .|..:.:|..|...|  :
 Worm    67 ALNLDSTAAKAYYRRAQAFKAL-------------------------ELYELAERDMKTCFKYSN 106

  Fly   219 GPNFTPDRPGMIEILPIEKPAYKRSKKAMRSVPVVDVVSPRATIDDSNQLRISDEDIDKI-FNSN 282
            .||             :|:.|  ...|..::|.|:|:.|    |:....|: |||...|| |..|
 Worm   107 DPN-------------MERQA--NDLKGKKNVQVIDLPS----IERDEYLQ-SDEKFTKIDFTYN 151

  Fly   283 CGIIEEVKKTNPKPTPMPDTSGPPKAETIAKTSKEVKPTKQTAVKVAPAVETPKETETRKDTKIV 347
            ...|||:                    .:|:.
 Worm   152 IEKIEEI--------------------IVAEE--------------------------------- 163

  Fly   348 PESDNEAKPSAPKKTAVEVPKVQTQVSP-PKTTIERSPEVNTVQTEKIEQASSNNAMSPSPI-ER 410
            ||:||            .|||..|::.| ||...:....||.::          .|.|..|: |.
 Worm   164 PENDN------------IVPKYITKLPPHPKDYQDFVGAVNMLK----------RAQSLLPLAEY 206

  Fly   411 FLPPAPTSTAQFHVTWKELSGPQKYQYLKSIEVPNLCKILGAGFDSDTFADLLRTIHDFFVPNKE 475
            ||   ..|..::...:.||        |..:....:.|.|.....:.      |||
 Worm   207 FL---NISMDKYSELFDEL--------LDDVYAVQIFKALNFHLKTG------RTI--------- 245

  Fly   476 PNTAAVLLEISKNDEFTILAMLMSAEEKKMVSSILN 511
            |:.||.::.||:...|.:|...||.|:|..::.||:
 Worm   246 PHLAARMMIISELSRFDLLIAFMSEEQKSTITEILD 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spag	NP_524664.1	TPR_11	95..161	CDD:290150	23/65 (35%)
		TPR repeat	96..124	CDD:276809	10/27 (37%)
		TPR_1	102..129	CDD:278916	9/26 (35%)
		TPR repeat	129..159	CDD:276809	11/29 (38%)
		TPR	130..160	CDD:197478	10/29 (34%)
		TPR_16	136..197	CDD:290168	18/60 (30%)
		TPR repeat	164..192	CDD:276809	9/27 (33%)
		RPAP3_C	415..503	CDD:290588	19/87 (22%)
rpap-3	NP_501282.1	3a0801s09	2..>98	CDD:273380	36/120 (30%)
		TPR repeat	8..36	CDD:276809	10/27 (37%)
		TPR repeat	40..70	CDD:276809	11/29 (38%)
		TPR repeat	75..103	CDD:276809	12/52 (23%)
		RPAP3_C	180..271	CDD:372776	28/126 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG4648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1617844at2759
OrthoFinder	1	1.000	-	-		FOG0006568
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.820