DRSC/TRiP Functional Genomics Resources

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Protein Alignment spag and sgt-1

DIOPT Version :10

Sequence 1:NP_524664.1 Gene:spag / 43958 FlyBaseID:FBgn0015544 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_494893.1 Gene:sgt-1 / 173846 WormBaseID:WBGene00019893 Length:337 Species:Caenorhabditis elegans


Alignment Length:326 Identity:83/326 - (25%)
Similarity:131/326 - (40%) Gaps:52/326 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 REYENSVKDLYSWEQDIKNKEKELQKSPLSAANKDLPVR----SHVQTDKSRKESPS-------S 72
            |:.:|.|   .|:.|.|:.|..:.|.:...|...::.::    |....|.|....||       .
 Worm    21 RDEQNLV---VSFLQFIRQKVSQNQATAEQAEALEVAIQCLEHSFGLDDASYAFQPSRPILELFK 82

  Fly    73 SAASSPTEKQDLPVDPVAQQYKKANDIKDRGNTYVKQGEYEKAIVAYSTAIAVYPHDPIYHINRA 137
            ||...|..:..||. |......:||.:|:.||..:|..::|.|:..|:.||.: ..||:|..|||
 Worm    83 SAEGLPEGESALPT-PSDSDISQANKLKEEGNDLMKASQFEAAVQKYNAAIKL-NRDPVYFCNRA 145

  Fly   138 LCYLKQESFDQCVEDCEAAIALDKLCVKAYYRRMQANESLGNNME-ALKDCTTVLAIEPKNIEAK 201
            ..|.:.|.:|..::||..|:|||....|| :.||....|..|..| |.:.....|.:||.....|
 Worm   146 AAYCRLEQYDLAIQDCRTALALDPSYSKA-WGRMGLAYSCQNRYEHAAEAYKKALELEPNQESYK 209

  Fly   202 RSLARINDRLRKI-----------------ATKSGPNFTPDRPGMIEILPI-EKPAYKRSKKAMR 248
            .:|....|:|:::                 |...||...|..|||..:..: .:|...::...|.
 Worm   210 NNLKIAEDKLKELESSRPAPGANPLAGLLGAMGGGPGGMPAMPGMPNMQNLMNEPGLMQAASQMM 274

  Fly   249 SVPVVDVVSPRATIDDSNQLRISDEDIDKIFNSNCGIIEEVKKTNPKPT--------PMPDTSGP 305
            |.|        |..|..|.:...:..|..:..:...:...:::|||:..        |..|...|
 Worm   275 SDP--------ALSDMFNNMMSGNGSIADLMAAGQQMAARMQETNPELIENLRRQFGPGADGGAP 331

  Fly   306 P 306
            |
 Worm   332 P 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spagNP_524664.1 TPR repeat 96..124 CDD:276809 10/27 (37%)
TPR 102..>211 CDD:440225 37/109 (34%)
TPR repeat 129..159 CDD:276809 12/29 (41%)
TPR repeat 164..192 CDD:276809 8/28 (29%)
PLN03209 <296..416 CDD:178748 4/19 (21%)
RPAP3_C 416..503 CDD:464012
sgt-1NP_494893.1 Spy 31..>212 CDD:443119 54/183 (30%)
TPR repeat 105..133 CDD:276809 10/27 (37%)
TPR repeat 137..167 CDD:276809 12/29 (41%)
TPR repeat 172..200 CDD:276809 8/28 (29%)
Blue background indicates that the domain is not in the aligned region.

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