DRSC/TRiP Functional Genomics Resources

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Protein Alignment spag and Stip1

DIOPT Version :10

Sequence 1:NP_524664.1 Gene:spag / 43958 FlyBaseID:FBgn0015544 Length:534 Species:Drosophila melanogaster
Sequence 2:XP_319365.4 Gene:Stip1 / 1279608 VectorBaseID:AGAMI1_001647 Length:325 Species:Anopheles gambiae


Alignment Length:294 Identity:78/294 - (26%)
Similarity:129/294 - (43%) Gaps:49/294 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EKAFELQRQVRQNAREYENSVK------DLYSWEQDIKNKEKELQKSPLSAANKDLPVRSHVQTD 63
            |||.|:.   |:|..:|:...|      :.|...:|.|:.:...:||                  
Mosquito    68 EKAVEVG---RENRADYKLIAKAFTRTGNAYRKLEDYKSAKTYFEKS------------------ 111

  Fly    64 KSRKESPSSSAASSPTEKQDLPVDPVAQ-QYKKANDIKDRGNTYVKQGEYEKAIVAYSTAIAVYP 127
            .|...:|...:..|.|||:...::.:|. ...||.:.|::||.|.|||:|..|:..||.||...|
Mosquito   112 LSEHRTPEVKSLLSDTEKKIKEMERLAYIDPSKAEEEKEKGNEYFKQGDYSTAVKHYSEAIKRNP 176

  Fly   128 HDPIYHINRALCYLKQESFDQCVEDCEAAIALDKLCVKAYYRRMQANESLGNNMEALKDCTTVLA 192
            .|...:.|||.||.|..:||..::|||....||:..:|.:.|:.:..:.:..:.|||......|.
Mosquito   177 DDAKLYSNRAACYTKLAAFDLGLKDCETCCRLDETFIKGWIRKGKILQVMQKSSEALTAYQKALE 241

  Fly   193 IEPKNIEAKRSLARINDRLRKIATKSGP----NFTPDRPGMIEILPIEKPAYKRSKKAMRSVPVV 253
            |:|.|.||....     |...:|..:.|    ....:.|.:.:||  :.||.:...:.|::    
Mosquito   242 IDPNNAEALEGY-----RACTMAVHADPKEVWKKAMNDPEVQQIL--KDPAMRVILEQMQN---- 295

  Fly   254 DVVSPRATIDDSNQLRISDEDIDKIFNSNCGIIE 287
               .|:|..:.....:::.: |.|:..|  |||:
Mosquito   296 ---DPKAVQEHLKNPQVASK-IQKLLES--GIIQ 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spagNP_524664.1 TPR repeat 96..124 CDD:276809 13/27 (48%)
TPR 102..>211 CDD:440225 38/108 (35%)
TPR repeat 129..159 CDD:276809 12/29 (41%)
TPR repeat 164..192 CDD:276809 5/27 (19%)
PLN03209 <296..416 CDD:178748
RPAP3_C 416..503 CDD:464012
Stip1XP_319365.4 TPR repeat 14..38 CDD:276809
LapB 16..250 CDD:442196 60/202 (30%)
TPR repeat 43..73 CDD:276809 3/4 (75%)
TPR repeat 85..113 CDD:276809 6/45 (13%)
TPR repeat 145..173 CDD:276809 13/27 (48%)
TPR repeat 178..208 CDD:276809 12/29 (41%)
TPR repeat 213..241 CDD:276809 5/27 (19%)
STI1 264..317 CDD:436075 11/62 (18%)
Blue background indicates that the domain is not in the aligned region.

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