DRSC/TRiP Functional Genomics Resources

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Protein Alignment spag and STIP1

DIOPT Version :10

Sequence 1:NP_524664.1 Gene:spag / 43958 FlyBaseID:FBgn0015544 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001269581.1 Gene:STIP1 / 10963 HGNCID:11387 Length:590 Species:Homo sapiens


Alignment Length:362 Identity:83/362 - (22%)
Similarity:130/362 - (35%) Gaps:80/362 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ELQRQVRQNAREYENSVKDLYSWEQDIKNKEKELQKSPLSAANKDLPVRSHVQTDKSRKESPSSS 73
            |:.|.:|.|.|....     |.|:          .|.|:..|.    |||.:.            
Human    11 EISRTIRTNGRGQRG-----YDWQ----------CKRPIRVAE----VRSSLH------------ 44

  Fly    74 AASSPTEKQDLPVDPVAQQYKKANDIKDRGNTYVKQGEYEKAIVAYSTAIAVYPHDPIYHINRAL 138
                            :...:..|::|::||..:..|..:.|:..||.||.:.||:.:.:.||:.
Human    45 ----------------SWSLRWVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSA 93

  Fly   139 CYLKQESFDQCVEDCEAAIALDKLCVKAYYRRMQANESLGNNMEALKDCTTVLAIEPKNIEAKRS 203
            .|.|:..:.:..||....:.|.....|.|.|:..|.|.|....||.:.....|..|..|.:.|..
Human    94 AYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEG 158

  Fly   204 LARINDRL--RKIATKSGPNFTPDRPGMIEILP-----IEKPAYKRSKKAMRSVPV---VDVVSP 258
            |..:..||  ||.   ..|...|:....:|..|     :..|.|:...:.:|:.|.   ..:..|
Human   159 LQNMEARLAERKF---MNPFNMPNLYQKLESDPRTRTLLSDPTYRELIEQLRNKPSDLGTKLQDP 220

  Fly   259 RATIDDSNQLRISDEDIDKIFNSNCGIIEEVKKTNPKPTPMPDTSGPPKAETIAKTSKEVKP-TK 322
            |.....|..|.:....:|          ||.:...|.|.|      |||.||..:..:|..| .|
Human   221 RIMTTLSVLLGVDLGSMD----------EEEEIATPPPPP------PPKKETKPEPMEEDLPENK 269

  Fly   323 QTAVKVAPAVETPKETETRKDTKIVPESDNEAKPSAP 359
            :.|:|   ..|...:...:||.....:..::||...|
Human   270 KQALK---EKELGNDAYKKKDFDTALKHYDKAKELDP 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spagNP_524664.1 TPR repeat 96..124 CDD:276809 9/27 (33%)
TPR 102..>211 CDD:440225 30/108 (28%)
TPR repeat 129..159 CDD:276809 6/29 (21%)
TPR repeat 164..192 CDD:276809 8/27 (30%)
PLN03209 <296..416 CDD:178748 18/65 (28%)
RPAP3_C 416..503 CDD:464012
STIP1NP_001269581.1 3a0801s09 <54..579 CDD:273380 69/272 (25%)
TPR repeat 54..79 CDD:276809 8/24 (33%)
TPR repeat 84..114 CDD:276809 6/29 (21%)
TPR repeat 119..147 CDD:276809 8/27 (30%)
TPR repeat 276..300 CDD:276809 4/23 (17%)
TPR repeat 305..335 CDD:276809
TPR repeat 347..375 CDD:276809
TPR repeat 411..435 CDD:276809
TPR repeat 440..470 CDD:276809
TPR repeat 475..503 CDD:276809
TPR repeat 509..538 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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