Protein Alignment MED20 and Med20

DIOPT Version :10

• Sequence 1: NP_001260223.1
• Gene: MED20 / 43952
• FlyBaseID: FBgn0013531
• Length: 268
• Species: Drosophila melanogaster
• Sequence 2: NP_001013196.1
• Gene: Med20 / 316209
• RGDID: 1306415
• Length: 212
• Species: Rattus norvegicus
• Alignment Length: 221
• Identity: 89/221 - (40%)
• Similarity: 131/221 - (59%)
• Gaps: 21/221 - (9%)

  Fly     1 MGVTILQPYPLPEGKSGAHIIDQLSKRLLALGATHAGQFLVDCETF--ISTPQPHNGAPGRAVHV 63
            ||||.:...|:.||||....::.|:|:|..|||...|.|.|||||:  .::.....|..|:.::|
  Rat     1 MGVTCVSQMPVAEGKSVQQTVELLTKKLEMLGAEKQGTFCVDCETYHTAASTLGSQGQAGKLMYV 65

  Fly    64 LHNSEYPASTFSIIDNGTGKQVAIVADNIFDLLMLKMTNTFTSKKQTKIESRGARFEYGDFVIKL 128
            :||||||.|.|::.:||.    .::||..||:||:|:...|.|.|.:|||:||.|::|.||::|:
  Rat    66 MHNSEYPLSCFALFENGP----CLIADTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKV 126

  Fly   129 GSVTMMEHFKGILIEIEYKSCVILAYCWEMIREMLQGFLGIAVNKDFPSYFAPQTIMTAMGQQQL 193
            |:|||....:||.:|:||..||:.:.||.::.|.||.|||    ...|.  ||    |..|.
  Rat   127 GTVTMGPSARGISVEVEYGPCVVASDCWSLLLEFLQSFLG----SHTPG--AP----TVFGN--- 178

  Fly   194 HAKHNDIFEPMDTVKQYLEQFTNYRK 219
              :|:.::.|.||:.||:|.|...||
  Rat   179 --RHDAVYGPADTMVQYMELFNKVRK 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MED20	NP_001260223.1	Med20	1..215	CDD:400779	86/215 (40%)
Med20	NP_001013196.1	Med20	1..198	CDD:400779	86/215 (40%)