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Protein Alignment MED20 and Gm20517
DIOPT Version :9
Sequence 1: | NP_001260223.1 |
Gene: | MED20 / 43952 |
FlyBaseID: | FBgn0013531 |
Length: | 268 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001351862.1 |
Gene: | Gm20517 / 112694759 |
MGIID: | 5141982 |
Length: | 150 |
Species: | Mus musculus |
Alignment Length: | 149 |
Identity: | 63/149 - (42%) |
Similarity: | 95/149 - (63%) |
Gaps: | 6/149 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGVTILQPYPLPEGKSGAHIIDQLSKRLLALGATHAGQFLVDCETF--ISTPQPHNGAPGRAVHV 63
||||.:...|:.||||....::.|:|:|..|||...|.|.|||||: .::.....|..|:.::|
Mouse 1 MGVTCVSQMPVAEGKSLQQTVELLTKKLEMLGAEKQGTFCVDCETYHTAASTLGSQGQAGKLMYV 65
Fly 64 LHNSEYPASTFSIIDNGTGKQVAIVADNIFDLLMLKMTNTFTSKKQTKIESRGARFEYGDFVIKL 128
:||||||.|.|::.:||. .::||..||:||:|:...|.|.|.:|||:||.|::|.||::|:
Mouse 66 MHNSEYPLSCFALFENGP----CLIADTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKV 126
Fly 129 GSVTMMEHFKGILIEIEYK 147
|:|||....:||.:|:..|
Mouse 127 GTVTMGPSARGISVEVTEK 145
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
MED20 | NP_001260223.1 |
Med20 |
1..215 |
CDD:285776 |
63/149 (42%) |
Gm20517 | NP_001351862.1 |
Med20 |
1..>149 |
CDD:312207 |
63/149 (42%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C167836921 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_104763 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
3 | 2.790 |
|
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