DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Cds and CDS1

DIOPT Version :9

Sequence 1:	NP_001286976.1	Gene:	Cds / 43950	FlyBaseID:	FBgn0010350	Length:	447	Species:	Drosophila melanogaster
Sequence 2:	NP_176433.2	Gene:	CDS1 / 842541	AraportID:	AT1G62430	Length:	421	Species:	Arabidopsis thaliana

Alignment Length:	380	Identity:	161/380 - (42%)
Similarity:	235/380 - (61%)	Gaps:	18/380 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly    78 DRWKNWVIRGIFTWIMICGFALIIYGGPLALMITTLLVQVKCFQEIISIGYQVYRIHGLPWFRSL 142
            :::|::::|...|..||.||.|::|.|.|.:....:::|:...:|:.::..:......||:.:.|
plant    44 NKYKSFMVRTYSTLWMIGGFVLVVYMGHLYITAMVVVIQIFMAKELFNLLRKAPEDKCLPYIKQL 108

  Fly   143 SWYFLLTSNYFFYGENLVDYFGVVINRVEY----LKFLVTYHRFLSFALYIIGFVWFVLSLVKKY 203
            :|:|..|:..|.||..|.......:...::    :..|:.||..:.:.||||||:||:|:|.||.
plant   109 NWHFFFTAMLFVYGRILSQRLANTMTADQFFYRLVSGLIKYHMAICYLLYIIGFMWFILTLKKKM 173

  Fly   204 YIKQFSLFAWTHVSLLIVVTQSYLIIQNIFEGLIWFIVPVSMIVCNDVMAYVFGFFFGRTPLIKL 268
            |..||..:||||:.|::|.|||...:.|||||:.||::|.|:|:.||:.||:|||||||||||||
plant   174 YKYQFGQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIIINDIFAYIFGFFFGRTPLIKL 238

  Fly   269 SPKKTWEGFIGGGFATVLFGILFSYVLCNYQYFICPIQYSEEQGRMTMSCVPSYLFTPQEYSLKL 333
            |||||||||||....|::...:.:.:|..:.:..||.|   :.....:.|....||.|:.::|..
plant   239 SPKKTWEGFIGASVTTIISAFVLANILGRFPWLTCPRQ---DLSTGWLQCDADPLFKPEPFALPA 300

  Fly   334 ----FGIGKTLNLYPFIWHSISLSLFSSIIGPFGGFFASGFKRAFKIKDFGDMIPGHGGIMDRFD 394
                :...|.:.:.|..||::.|.||:|||.|||||||||||||||||||||.|||||||.||.|
plant   301 WIPEWFPWKEMTILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMD 365

  Fly   395 CQFLMATFVNVYISSFI--RTPSPAKLLTQIY-NLKPDQQYQIY----QSLKDNL 442
            ||.:||.|..:|:.|||  ::.|..|:|.||. ||..::|..::    |.|||.|
plant   366 CQMVMAVFAYIYLQSFIVSQSVSVDKILDQILTNLTFEEQQALFVKLGQMLKDKL 420

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Cds	NP_001286976.1	CTP_transf_1	120..438	CDD:304393	145/332 (44%)
CDS1	NP_176433.2	PLN02594	83..419	CDD:215322	147/338 (43%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	303	1.000	Domainoid score	I332
eggNOG	1	0.900	-	-		E1_COG0575
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	313	1.000	Inparanoid score	I731
OMA	1	1.010	-	-		QHG54574
OrthoDB	1	1.010	-	-		D1072976at2759
OrthoFinder	1	1.000	-	-		FOG0001281
OrthoInspector	1	1.000	-	-		otm2787
orthoMCL	1	0.900	-	-		OOG6_101561
Panther	1	1.100	-	-	O	PTHR13773
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X636
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	13	12.840