DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cds and CDS2

DIOPT Version :10

Sequence 1:NP_524661.1 Gene:Cds / 43950 FlyBaseID:FBgn0010350 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_001031697.1 Gene:CDS2 / 828329 AraportID:AT4G22340 Length:447 Species:Arabidopsis thaliana


Alignment Length:385 Identity:173/385 - (44%)
Similarity:240/385 - (62%) Gaps:30/385 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 RWKNWVIRGIFTWIMICGFALIIYGGPLALMITTLLVQVKCFQEIISIGYQVYRIHGLPWFRSLS 143
            ::|:::||...|:.||.|||||:|.|.|.:....:::|:...:|:.::..:.:....||.||.|:
plant    69 KYKSFLIRAYSTFWMIGGFALIVYLGHLYITAMVVVIQIFMARELFNLLRKTHEDKQLPGFRLLN 133

  Fly   144 WYFLLTSNYFFYG----ENLVDYFGVVINRVEY--LKFLVTYHRFLSFALYIIGFVWFVLSLVKK 202
            |:|..|:..|.||    :.||:  .|..::|.|  :..|:.||..:.::|||.|||||:|:|.||
plant   134 WHFFFTAMLFVYGRILSQRLVN--TVTPDKVLYRLVTSLIKYHMAICYSLYISGFVWFILTLKKK 196

  Fly   203 YYIKQFSLFAWTHVSLLIVVTQSYLIIQNIFEGLIWFIVPVSMIVCNDVMAYVFGFFFGRTPLIK 267
            .|..|||.:||||:.|::|.|||...:.|||||:.||::|.|:||.||:.||:.|||||||||||
plant   197 MYKYQFSQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIFAYICGFFFGRTPLIK 261

  Fly   268 LSPKKTWEGFIGGGFATVLFGILFSYVLCNYQYFICPIQYSEEQGRMTMSCVPSYLFTPQEYSLK 332
            ||||||||||||....||:...|.:.::..:.:..||   .|:.....:.|.|..||..:.::|.
plant   262 LSPKKTWEGFIGASITTVISAFLLANIMGRFLWLTCP---REDLSTGWLLCDPGPLFKQETHALP 323

  Fly   333 LFGIG--------KTLNLYPFIWHSISLSLFSSIIGPFGGFFASGFKRAFKIKDFGDMIPGHGGI 389
                |        |.:::.|..||::.|.||:|||.|||||||||||||||||||||.|||||||
plant   324 ----GWISDWLPWKEISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGI 384

  Fly   390 MDRFDCQFLMATFVNVYISSFI--RTPSPAKLLTQIY-NLKPDQQYQIYQSLKDNLGDML 446
            .||.|||.:||.|..:|..||:  ...|..|||.||. :|..::|    |:|...||.||
plant   385 TDRMDCQMVMAVFAYIYHQSFVVPEVLSVDKLLDQIITSLTLEEQ----QALLVKLGQML 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdsNP_524661.1 CTP_transf_1 120..438 CDD:451277 153/334 (46%)
CDS2NP_001031697.1 PLN02594 107..446 CDD:215322 158/347 (46%)

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