DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cds and cds2

DIOPT Version :10

Sequence 1:NP_524661.1 Gene:Cds / 43950 FlyBaseID:FBgn0010350 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_957480.1 Gene:cds2 / 394161 ZFINID:ZDB-GENE-030717-4 Length:444 Species:Danio rerio


Alignment Length:453 Identity:269/453 - (59%)
Similarity:330/453 - (72%) Gaps:33/453 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEVRRRKGEDEPL-----EDTAISGSDAANK-RNSAADSSDHVDSEEEKIPEEKFVDELAKNLP 59
            |||:|:|...|:.|     ||   .||:...| |:.|:||        |..||          :|
Zfish     1 MAELRQRGATDKELKHQHSED---KGSETEGKERDGASDS--------ETKPE----------VP 44

  Fly    60 QGTDKTPEILDSALKDLPDRWKNWVIRGIFTWIMICGFALIIYGGPLALMITTLLVQVKCFQEII 124
            ...|.|||:|:.||..|..|||||.:|||.|..||..|..|||.||:.||:..|.||:|||||||
Zfish    45 VSADDTPEVLNKALSGLSSRWKNWWVRGILTLAMISFFFFIIYLGPMVLMMIVLCVQIKCFQEII 109

  Fly   125 SIGYQVYRIHGLPWFRSLSWYFLLTSNYFFYGENLVDYFGVVINRVEYLKFLVTYHRFLSFALYI 189
            :|||.||..:.|||||:|||||||..|||||||.:.|||..::.|.|.|:.|..||||:|||||:
Zfish   110 TIGYSVYHSYDLPWFRTLSWYFLLCVNYFFYGETVTDYFFTLVQREEPLRILSKYHRFISFALYL 174

  Fly   190 IGFVWFVLSLVKKYYIKQFSLFAWTHVSLLIVVTQSYLIIQNIFEGLIWFIVPVSMIVCNDVMAY 254
            .||..||||||||:|..||.:|.||||:||||||||:|||.|:|||:||||||:|.::|||:|||
Zfish   175 TGFCMFVLSLVKKHYRLQFYMFGWTHVTLLIVVTQSHLIIHNLFEGMIWFIVPISCVICNDIMAY 239

  Fly   255 VFGFFFGRTPLIKLSPKKTWEGFIGGGFATVLFGILFSYVLCNYQYFICPIQYSEEQGRMTMSCV 319
            :|||||||||||||||||||||||||.|:|::||||.|||:..|.||:||::::.:..|.|:.|.
Zfish   240 MFGFFFGRTPLIKLSPKKTWEGFIGGFFSTIVFGILLSYVMAGYSYFVCPVEFNNDSNRFTVDCQ 304

  Fly   320 PSYLFTPQEYSL-----KLFGIGKTLNLYPFIWHSISLSLFSSIIGPFGGFFASGFKRAFKIKDF 379
            ||.||..|:|||     .:.| ..|:.||||..|||:||.|:||:||||||||||||||||||||
Zfish   305 PSELFQLQDYSLPSVLQSITG-WTTVKLYPFQIHSIALSSFASIMGPFGGFFASGFKRAFKIKDF 368

  Fly   380 GDMIPGHGGIMDRFDCQFLMATFVNVYISSFIRTPSPAKLLTQIYNLKPDQQYQIYQSLKDNL 442
            .:.||||||||||||||:||||||||||:||||.|:|:|::.|:..|:||||..|:.|||.:|
Zfish   369 ANTIPGHGGIMDRFDCQYLMATFVNVYIASFIRGPNPSKVIQQLLALRPDQQLHIFNSLKAHL 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdsNP_524661.1 CTP_transf_1 120..438 CDD:451277 213/322 (66%)
cds2NP_957480.1 CTP_transf_1 105..436 CDD:451277 217/328 (66%)

Return to query results.
Submit another query.