DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cds and Cds2

DIOPT Version :10

Sequence 1:NP_524661.1 Gene:Cds / 43950 FlyBaseID:FBgn0010350 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_446095.2 Gene:Cds2 / 114101 RGDID:621186 Length:444 Species:Rattus norvegicus


Alignment Length:450 Identity:265/450 - (58%)
Similarity:328/450 - (72%) Gaps:23/450 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEVRRRK-GEDEPLEDTAISGSDAANKRNSAADSSDHVDSEEEKIPEEKFVDELAKNLPQGTDK 64
            |.|:|:|. .||.|.||.. |.|:|.....:|:||    :|..|..|.           |...|.
  Rat     1 MTELRQRAVREDAPPEDKE-SESEAKLDGETASDS----ESRAETAPP-----------PTSIDD 49

  Fly    65 TPEILDSALKDLPDRWKNWVIRGIFTWIMICGFALIIYGGPLALMITTLLVQVKCFQEIISIGYQ 129
            |||:|:.||.:|..|||||.:|||.|..||..|.:|||.||:.||:..:.||:|||.|||:|||.
  Rat    50 TPEVLNRALSNLSSRWKNWWVRGILTMAMIAFFFIIIYLGPMVLMMIVMCVQIKCFHEIITIGYN 114

  Fly   130 VYRIHGLPWFRSLSWYFLLTSNYFFYGENLVDYFGVVINRVEYLKFLVTYHRFLSFALYIIGFVW 194
            ||..:.|||||:|||||||..|||||||.:.|||..::.|.|.|:.|..||||:||.||:.||..
  Rat   115 VYHSYDLPWFRTLSWYFLLCVNYFFYGETVTDYFFTLVQREEPLRILSKYHRFISFTLYLTGFCM 179

  Fly   195 FVLSLVKKYYIKQFSLFAWTHVSLLIVVTQSYLIIQNIFEGLIWFIVPVSMIVCNDVMAYVFGFF 259
            ||||||||:|..||.:|.||||:||||||||:|:|.|:|||:||||||:|.::|||:|||:||||
  Rat   180 FVLSLVKKHYRLQFYMFGWTHVTLLIVVTQSHLVIHNLFEGMIWFIVPISCVICNDIMAYMFGFF 244

  Fly   260 FGRTPLIKLSPKKTWEGFIGGGFATVLFGILFSYVLCNYQYFICPIQYSEEQGRMTMSCVPSYLF 324
            |||||||||||||||||||||.||||:||:|.|||:..|:.|:||::|:.:....|:.|.||.||
  Rat   245 FGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPVEYNNDTNSFTVDCEPSDLF 309

  Fly   325 TPQEYSL-----KLFGIGKTLNLYPFIWHSISLSLFSSIIGPFGGFFASGFKRAFKIKDFGDMIP 384
            ..|||::     .|.| .||:.:|||..|||:||.|:|:|||||||||||||||||||||.:.||
  Rat   310 RLQEYNIPGVIQSLVG-WKTMRMYPFQIHSIALSTFASLIGPFGGFFASGFKRAFKIKDFANTIP 373

  Fly   385 GHGGIMDRFDCQFLMATFVNVYISSFIRTPSPAKLLTQIYNLKPDQQYQIYQSLKDNLGD 444
            ||||||||||||:||||||||||:||||.|:|:||:.|...|:||||..|:.:||.:|.|
  Rat   374 GHGGIMDRFDCQYLMATFVNVYIASFIRGPNPSKLIQQFLTLRPDQQLHIFNTLKSHLTD 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdsNP_524661.1 CTP_transf_1 120..438 CDD:451277 211/322 (66%)
Cds2NP_446095.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51 20/65 (31%)
CTP_transf_1 105..424 CDD:451277 210/319 (66%)

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