DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cds and Cds2

DIOPT Version :10

Sequence 1:NP_524661.1 Gene:Cds / 43950 FlyBaseID:FBgn0010350 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_619592.1 Gene:Cds2 / 110911 MGIID:1332236 Length:444 Species:Mus musculus


Alignment Length:449 Identity:267/449 - (59%)
Similarity:330/449 - (73%) Gaps:21/449 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEVRRR-KGEDEPLEDTAISGSDAANKRNSAADSSDHVDSEEEKIPEEKFVDELAKNLPQGTDK 64
            |.|:|:| ..||.|.||.. |.|:|.....:|:||    :|..|..|           ||...|.
Mouse     1 MTELRQRVVREDAPPEDKE-SESEAKLDGETASDS----ESRAETAP-----------LPTSVDD 49

  Fly    65 TPEILDSALKDLPDRWKNWVIRGIFTWIMICGFALIIYGGPLALMITTLLVQVKCFQEIISIGYQ 129
            |||:|:.||.:|..|||||.:|||.|..||..|.:|||.||:.||:..:.||:|||.|||:|||.
Mouse    50 TPEVLNRALSNLSSRWKNWWVRGILTLAMIAFFFIIIYLGPMVLMMIVMCVQIKCFHEIITIGYN 114

  Fly   130 VYRIHGLPWFRSLSWYFLLTSNYFFYGENLVDYFGVVINRVEYLKFLVTYHRFLSFALYIIGFVW 194
            ||..:.|||||:|||||||..|||||||.:.|||..::.|.|.|:.|..||||:|||||:.||..
Mouse   115 VYHSYDLPWFRTLSWYFLLCVNYFFYGETVTDYFFTLVQREEPLRILSKYHRFISFALYLTGFCM 179

  Fly   195 FVLSLVKKYYIKQFSLFAWTHVSLLIVVTQSYLIIQNIFEGLIWFIVPVSMIVCNDVMAYVFGFF 259
            ||||||||:|..||.:|.||||:||||||||:|:|.|:|||:||||||:|.::|||:|||:||||
Mouse   180 FVLSLVKKHYRLQFYMFGWTHVTLLIVVTQSHLVIHNLFEGMIWFIVPISCVICNDIMAYMFGFF 244

  Fly   260 FGRTPLIKLSPKKTWEGFIGGGFATVLFGILFSYVLCNYQYFICPIQYSEEQGRMTMSCVPSYLF 324
            |||||||||||||||||||||.||||:||:|.|||:..|:.|:||::|:.:....|:.|.||.||
Mouse   245 FGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPVEYNNDTNSFTVDCEPSDLF 309

  Fly   325 TPQEYSLK---LFGIG-KTLNLYPFIWHSISLSLFSSIIGPFGGFFASGFKRAFKIKDFGDMIPG 385
            ..|||::.   ...|| ||:.:|||..|||:||.|:|:|||||||||||||||||||||.:.|||
Mouse   310 RLQEYNIPGVIQSAIGWKTVRMYPFQIHSIALSTFASLIGPFGGFFASGFKRAFKIKDFANTIPG 374

  Fly   386 HGGIMDRFDCQFLMATFVNVYISSFIRTPSPAKLLTQIYNLKPDQQYQIYQSLKDNLGD 444
            |||||||||||:||||||||||:||||.|:|:||:.|...|:||||..|:.:||.:|.|
Mouse   375 HGGIMDRFDCQYLMATFVNVYIASFIRGPNPSKLIQQFLTLRPDQQLHIFNTLKSHLTD 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdsNP_524661.1 CTP_transf_1 120..438 CDD:451277 212/321 (66%)
Cds2NP_619592.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48 20/62 (32%)
CTP_transf_1 105..424 CDD:451277 211/318 (66%)

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