DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cds and cds1

DIOPT Version :9

Sequence 1:NP_001286976.1 Gene:Cds / 43950 FlyBaseID:FBgn0010350 Length:447 Species:Drosophila melanogaster
Sequence 2:XP_031759325.1 Gene:cds1 / 100496577 XenbaseID:XB-GENE-978567 Length:448 Species:Xenopus tropicalis


Alignment Length:427 Identity:253/427 - (59%)
Similarity:321/427 - (75%) Gaps:12/427 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KRNSAAD--SSDHVDSEEEKIPEEKFV-DELAKNLPQ---GTDKTPEILDSALKDLPDRWKNWVI 85
            ||:...|  :.:|....:|...|.|:| |::..::|.   ..|.|||:|...|..|..|||||.|
 Frog    10 KRSILQDLYTLEHSSINKETSTEGKYVEDDIDSDIPDVLPFNDSTPEVLKPVLSGLSSRWKNWWI 74

  Fly    86 RGIFTWIMICGFALIIYGGPLALMITTLLVQVKCFQEIISIGYQVYRIHGLPWFRSLSWYFLLTS 150
            ||||:..||..|..:||.||:.|::....:||||||||||||::|||.:.|||||:|||||||..
 Frog    75 RGIFSLTMISLFFFLIYMGPVMLILLVSAIQVKCFQEIISIGHRVYRSYELPWFRTLSWYFLLCV 139

  Fly   151 NYFFYGENLVDYFGVVINRVEYLKFLVTYHRFLSFALYIIGFVWFVLSLVKKYYIKQFSLFAWTH 215
            |||||||.|.|||..::.|.|.|:||:.||||:|||.|:|||..||||||||:|..||.:|.|||
 Frog   140 NYFFYGETLADYFATLVQREEMLQFLIRYHRFISFAFYLIGFCMFVLSLVKKHYRLQFYMFGWTH 204

  Fly   216 VSLLIVVTQSYLIIQNIFEGLIWFIVPVSMIVCNDVMAYVFGFFFGRTPLIKLSPKKTWEGFIGG 280
            |:|||.||||:|:|||:|||:||||||:|:::|||:|||:|||||||||||||||||||||||||
 Frog   205 VTLLITVTQSHLVIQNLFEGMIWFIVPISIVICNDIMAYIFGFFFGRTPLIKLSPKKTWEGFIGG 269

  Fly   281 GFATVLFGILFSYVLCNYQYFICPIQYSEEQGRMTMSCVPSYLFTPQEYSL-----KLFGIGKTL 340
            .|.||:||.||:|:|..:|||:||::||.|....:..|.||.:|....|.:     .|.| .:|:
 Frog   270 FFMTVIFGFLFAYILAQFQYFVCPVEYSSETNSFSTKCEPSEIFRLHYYIVPAYLQPLLG-RRTV 333

  Fly   341 NLYPFIWHSISLSLFSSIIGPFGGFFASGFKRAFKIKDFGDMIPGHGGIMDRFDCQFLMATFVNV 405
            ::|||..|||:||.|:|:|||||||||||||||||||||.|.||||||||||.|||:||||||:|
 Frog   334 SMYPFQIHSIALSSFASLIGPFGGFFASGFKRAFKIKDFADTIPGHGGIMDRSDCQYLMATFVHV 398

  Fly   406 YISSFIRTPSPAKLLTQIYNLKPDQQYQIYQSLKDNL 442
            ||:||||.|:|:|:|.|:..|.|:||..||::|:.:|
 Frog   399 YIASFIRGPNPSKVLQQLLVLHPEQQLNIYKALRAHL 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdsNP_001286976.1 CTP_transf_1 120..438 CDD:304393 212/322 (66%)
cds1XP_031759325.1 CTP_transf_1 109..439 CDD:419696 214/328 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 464 1.000 Domainoid score I466
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68173
Inparanoid 1 1.050 535 1.000 Inparanoid score I1176
OMA 1 1.010 - - QHG54574
OrthoDB 1 1.010 - - D1072976at2759
OrthoFinder 1 1.000 - - FOG0001281
OrthoInspector 1 1.000 - - otm48838
Panther 1 1.100 - - LDO PTHR13773
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X636
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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