DRSC/TRiP Functional Genomics Resources

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Protein Alignment wb and NTN4

DIOPT Version :10

Sequence 1:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster
Sequence 2:NP_067052.2 Gene:NTN4 / 59277 HGNCID:13658 Length:628 Species:Homo sapiens


Alignment Length:617 Identity:165/617 - (26%)
Similarity:244/617 - (39%) Gaps:141/617 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 PPLFNVVPRAQISVNATCGQNGAEEY----------CKQVGAKPCGICNAHSSDRAKQRSIQSLI 209
            |.:.|:....::..:.|||||..|.|          |:|   ..|..|||.....|...|..   
Human    36 PRMGNLALGRKLWADTTCGQNATELYCFYSENTDLTCRQ---PKCDKCNAAYPHLAHLPSAM--- 94

  Fly   210 SSGSGSGSGSGFEEGWWQSPTLQGGRQFEYVTILLDLKQTFQIFSVWLKSANSPRPASWILEKSL 274
                 :.|...|...||||     ........|.|||:..| .|:..:....|||||:.:|::|.
Human    95 -----ADSSFRFPRTWWQS-----AEDVHREKIQLDLEAEF-YFTHLIVMFKSPRPAAMVLDRSQ 148

  Fly   275 D-GINFEPWQYFGLSDADCQRRWNLSGQNGKYVFQNDTEIICSTQFSKPGPLENG-VLHASLLKN 337
            | |..::|::||.   .:|...:.|.....|      ...||::::|.|.|...| |:..:|...
Human   149 DFGKTWKPYKYFA---TNCSATFGLEDDVVK------KGAICTSKYSSPFPCTGGEVIFKALSPP 204

  Fly   338 RPGATDQSPELMKFITTRYIRIRLQGMHSTANQDNSLDWLLDSPSLEKHSFYSLSQLKVSARLDC 402
            .......|.::.:.:....:|::|....|...|.|.|:   :.|....|  |::....|.....|
Human   205 YDTENPYSAKVQEQLKITNLRVQLLKRQSCPCQRNDLN---EEPQHFTH--YAIYDFIVKG
SCFC 264

  Fly   403 NGHAN--------RSHESPDDPLM---QCICQHNTCGAQCEQCCPLFQDRPYQMG-------GEC 449
            ||||:        |..::|....|   :|:|:|||.|:.|:.|.||:.|||::..       .||
Human   265 NGHADQCIPVHGFRPVKAPGTFHMVHGKCMCKHNTAGSHCQHCAPLYNDRPWEAADGKTGAPNEC 329

  Fly   450 EICQCYGHAESCTYDPFL-------DKGICQSCSNNTAGIECEFCEMGFYRELDAPLT--DPCLP 505
            ..|:|.|||::|.:|..:       ..|:|..|.:||.|..|:.|:.||||:|..|.:  |.|.|
Human   330 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDACKP 394

  Fly   506 CSCN-------PARSTGGCQSDGGSCNCLEGFQGKNCEECAPGY--YGD-DCKRCECDERGSLGS 560
            |||:       ||.|...|....|.|.|..|..|:.|:.|..||  :|| .|:.|:|  .||...
Human   395 CSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGSCDP 457

  Fly   561 -TGSC----------------------------------------SGVCQCKLNVEGSTCSECAP 584
             ||.|                                        ||.|:||....|:..:.|..
Human   458 ITGDCISSHTDIDWYHEVPDFRPVHNKSEPAWEWEDAQGFSALLHSGKCECKEQTLGNAKAFCGM 522

  Fly   585 GY-----FDLSAENAEGCTSCWCSGVSQTCHSAKLQTL-AFETLNDWKITDIQRVKPISIP---- 639
            .|     ..:.:.:.:|........:.:...|.||:.. ...||.....||.....||..|    
Human   523 KYSYVLKIKILSAHDKGTHVEVNVKIKKVLKSTKLKIFRGKRTLYPESWTDRGCTCPILNPGLEY 587

  Fly   640 -----VDAETNRLIFANELDEVEAIYWQASLG 666
                 .|..|.:|| .|....|:  :|:.|||
Human   588 LVAGHEDIRTGKLI-VNMKSFVQ--HWKPSLG 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wbNP_723870.1 Laminin_N 153..398 CDD:459653 63/254 (25%)
EGF_Lam 401..450 CDD:238012 22/66 (33%)
EGF_Lam 505..552 CDD:238012 21/56 (38%)
Laminin_EGF 550..597 CDD:395007 15/92 (16%)
Laminin_B 660..813 CDD:459652 4/7 (57%)
EGF_Lam 851..900 CDD:238012
Laminin_EGF <943..971 CDD:395007
Laminin_EGF 974..1018 CDD:395007
EGF_Lam 1017..1065 CDD:238012
Laminin_EGF 1065..>1105 CDD:395007
EGF_Lam 1150..1197 CDD:238012
Laminin_EGF 1199..1247 CDD:395007
EGF_Lam 1247..1292 CDD:238012
Laminin_EGF 1294..1342 CDD:395007
Laminin_EGF 1340..1392 CDD:395007
Laminin_B 1486..1626 CDD:459652
EGF_Lam 1669..1716 CDD:238012
Laminin_EGF 1718..1767 CDD:395007
EGF_Lam 1772..1819 CDD:238012
YhaN <1907..2141 CDD:443752
SMC_prok_B <2123..>2390 CDD:274008
Laminin_II 2279..2400 CDD:368703
LamG 2399..>2492 CDD:473984
LamG 2586..2753 CDD:238058
Laminin_G_2 2804..2944 CDD:460494
LamG 3018..3167 CDD:238058
LamG 3192..3347 CDD:238058
NTN4NP_067052.2 Laminin_N 34..260 CDD:459653 63/254 (25%)
EGF_Lam 261..320 CDD:238012 21/58 (36%)
Laminin_EGF 332..392 CDD:395007 22/59 (37%)
EGF_Lam 395..446 CDD:214543 18/50 (36%)
NTR_netrin-4_like 516..626 CDD:239633 23/104 (22%)
Blue background indicates that the domain is not in the aligned region.

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