DRSC/TRiP Functional Genomics Resources

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Protein Alignment wb and cntnap1

DIOPT Version :10

Sequence 1:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster
Sequence 2:XP_694580.5 Gene:cntnap1 / 566220 ZFINID:ZDB-GENE-030916-2 Length:1309 Species:Danio rerio


Alignment Length:1002 Identity:209/1002 - (20%)
Similarity:348/1002 - (34%) Gaps:259/1002 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  2467 TRDPKYDDAWYHVEANR-----------TLNLGSLVVRRMNNYGE-LTPPNPVIITGSTDT--EH 2517
            |||.:   .|..::..|           |.|....|.:.|..||: .....|.::.|...|  .:
Zfish    64 TRDRQ---PWMQIDLGRKYRIMAIATQGTFNSYDWVTKYMVLYGDRFDSWTPYVMKGGNMTLPGN 125

  Fly  2518 TRFYQSRSDRISLGGFASKDLQFTPGLNVVVHQVEVDNKPLGLWNFVTSEGSCGGSMVGAKESSA 2582
            ..:||.:.: :....|.:|.|:.               .|:| ||  |..|...|..|.......
Zfish   126 WNYYQVKRN-VFHYAFTAKHLRI---------------YPMG-WN--TENGGKIGLRVEFYGCPY 171

  Fly  2583 SSTARHFNG---LGYAQLMKTRPRPTRKNLFS-VQMTFRTLDENALLFLAVDDKNNRSVSVTLSR 2643
            .|...:|.|   :.|     :.||...:.|.. ..:.|:||:::.:| |..:.....|:::.|..
Zfish   172 DSYVMNFEGDDMVAY-----SFPRGRMRTLQDHYALNFKTLEKDGIL-LHSEGLQGDSITLELKT 230

  Fly  2644 GRIMFRIDYGDESKLEINTTKKYNVG------QWIKIEAAR-----EFSAKRSTENGMLRVNNDR 2697
            ||:...|..|..:....|......:|      .|..:...|     .|:....||..:|  |.:.
Zfish   231 GRLYLHISLGSSTVHNTNGMTTMMLGNLLDTQHWHYVTIKRFGRELNFTLDSQTETTIL--NGEF 293

  Fly  2698 PISGAPTLPVNIHLLPDLSKTVYYLGGVPPGFTSGTSKAPGADNPFLGCMKDVQVNGET------ 2756
            .           ||  ||.|.: |:|||   ........||..| |.|||::|.:||..      
Zfish   294 Q-----------HL--DLDKKI-YVGGV---IEKDMPHLPGKVN-FRGCMENVFINGINIIYMTQ 340

  Fly  2757 -------YDPLESSSYYGVEPSCKNMITK-AGFSG-NGYLELPSQSLRKRSNTALVFRTLQPDCL 2812
                   ..|.:...:|    .|::::.| ..|:| |.||:||....:.|......||:.....|
Zfish   341 NQEPEIRLAPKKKKMHY----MCRDLLWKPMTFAGPNNYLQLPGFFRKNRLAVKFKFRSWDYTGL 401

  Fly  2813 LLLAAYPPEILGDYDAKDIKGNFSISLVDGQLHV-WVNSGRSFIKMSSNSSQMNDGEFHVVHLIK 2876
            |:...:..|:          |:..:.|.:||::| .:..|...::.:: ..::|||.:|.|.|..
Zfish   402 LMFTRFADEL----------GSLELGLSEGQVNVTLMQPGNKRLRFAA-GYRLNDGFWHTVDLTA 455

  Fly  2877 TGRKLELMVDDELQEIRNLNGNPTVVSLPRDAGGLYIGGAPPHESYTPLAPTFVNLEGAIRDVVF 2941
            ....|.:.:|::......:. ||.:|   |.....:.||.|...:............|.::.:..
Zfish   456 KDNLLTITIDEDESSPLKIT-NPFMV---RTGDRYFFGGCPKTNNTARCVTKLSRFHGCMQQIFI 516

  Fly  2942 NNRTINFNDALTFANVQIGRNGPLMGSLKGGLY-DVLLKTEPMIGKSFTASPEGCKRIGSYSYEP 3005
            ::..::.:               :|...|.|.| ::||.|   .|.:...||..|:..|......
Zfish   517 DDEPVDID---------------VMLQRKWGRYAEILLGT---CGITDRCSPNPCEHEGRCIQSW 563

  Fly  3006 NAF-----KFG-------DDIY--SYSQLKLPERHFWQRNFHLSFDFRSFYPNGMLYLSPGSKEK 3056
            |.|     ..|       :.:|  |....:|..: :|..|:.:..|.     :|.|        |
Zfish   564 NDFLCVCNNTGYKGEVCHNSVYRESCEAYRLNGK-YWSGNYTIDPDL-----SGPL--------K 614

  Fly  3057 PKHYVALVLKDGQLVLVVRGRRREELQLTAKLND-----------GEWHRVT------------- 3097
            |......:|:  :...|:...|.:..:::....|           ..|..||             
Zfish   615 PFTVYCNMLQ--KTWTVIEHNRMKSTKVSGSTIDRPYIGDVQYVNASWDEVTALANTSLYCEQWI 677

  Fly  3098 -ISC---------HDRKVTMSVEIGRTDQKTSAQMKLPKKIGASQLLLVGGLPQSP--------- 3143
             .||         |.|..|  ..|||.::              |.....|..|:|.         
Zfish   678 EFSCYKSRLLNTPHGRPYT--YWIGRHNE--------------SHEYWGGAFPESGKCGCAVNQT 726

  Fly  3144 -------VKVSSDLYVRLEPFKGCL--------RRVSINNNTQDLARPGKHS--NVGQCFPTVER 3191
                   ....:| |.:....||.|        ||:.|.    |..|.|..:  :||..:...:|
Zfish   727 CTDSKYWCNCDAD-YRQWHSDKGYLSFRDHLPIRRLVIG----DTNRTGSEAQYSVGALYCHGDR 786

  Fly  3192 GSY----FPGDAYAIYKKNFNVGKYLDLETEFRTSELSGILLSVSDPNGFPALSLELHN-GNIIF 3251
            ..:    |....|..: ..|..|...|:...|||....|:.:..||.:....|.:||:: ..::|
Zfish   787 SIWNTIAFTKPTYLTF-PTFKPGTSADITFHFRTYRTYGVFVEASDDHLRNFLRVELNSTTEVVF 850

  Fly  3252 SCDPGNGAPMRVESSLPTKYALCDNKWHNISALYDGEQIVLRIDQLPAVISVGNQGNAGKVQTRS 3316
            ....|:|..   ..:|.:..||.||:||.:.|..:.:...|::|.||..|..........:....
Zfish   851 IFMVGDGIR---NVTLRSPKALNDNEWHYVEAEINVKLARLKVDFLPPAIHKFPGQTYITMDFTQ 912

  Fly  3317 PLYIGGLPESAPSGSLISRENFKGCIR 3343
            ||.:|     |.:.:|   ..|.||:|
Zfish   913 PLLVG-----AANHTL---RPFLGCLR 931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wbNP_723870.1 Laminin_N 153..398 CDD:459653
EGF_Lam 401..450 CDD:238012
EGF_Lam 505..552 CDD:238012
Laminin_EGF 550..597 CDD:395007
Laminin_B 660..813 CDD:459652
EGF_Lam 851..900 CDD:238012
Laminin_EGF <943..971 CDD:395007
Laminin_EGF 974..1018 CDD:395007
EGF_Lam 1017..1065 CDD:238012
Laminin_EGF 1065..>1105 CDD:395007
EGF_Lam 1150..1197 CDD:238012
Laminin_EGF 1199..1247 CDD:395007
EGF_Lam 1247..1292 CDD:238012
Laminin_EGF 1294..1342 CDD:395007
Laminin_EGF 1340..1392 CDD:395007
Laminin_B 1486..1626 CDD:459652
EGF_Lam 1669..1716 CDD:238012
Laminin_EGF 1718..1767 CDD:395007
EGF_Lam 1772..1819 CDD:238012
YhaN <1907..2141 CDD:443752
SMC_prok_B <2123..>2390 CDD:274008
Laminin_II 2279..2400 CDD:368703
LamG 2399..>2492 CDD:473984 7/35 (20%)
LamG 2586..2753 CDD:238058 43/181 (24%)
Laminin_G_2 2804..2944 CDD:460494 27/140 (19%)
LamG 3018..3167 CDD:238058 34/206 (17%)
LamG 3192..3347 CDD:238058 39/157 (25%)
cntnap1XP_694580.5 FA58C 38..168 CDD:238014 27/125 (22%)
Laminin_G_2 204..333 CDD:460494 38/149 (26%)
LamG 366..517 CDD:238058 35/165 (21%)
EGF 548..578 CDD:394967 7/29 (24%)
GGGWT_bact <600..630 CDD:468872 7/44 (16%)
LamG 791..936 CDD:238058 39/153 (25%)
EGF_CA 960..994 CDD:238011
Laminin_G_2 1050..1178 CDD:460494
4.1m 1260..1278 CDD:128590
Blue background indicates that the domain is not in the aligned region.

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