Sequence 1: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_687343.5 | Gene: | lamc3 / 558958 | ZFINID: | ZDB-GENE-060531-121 | Length: | 1643 | Species: | Danio rerio |
Alignment Length: | 2297 | Identity: | 524/2297 - (22%) |
---|---|---|---|
Similarity: | 799/2297 - (34%) | Gaps: | 800/2297 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 155 PPLFNVVPRAQISVNATCGQNGAEEYCKQVGA-KPCGICNAHSSDRAKQRSIQSLISSGSGSGSG 218
Fly 219 SGFEEGWWQSPTLQGGRQF-EYVTILLDLKQTFQIFSVWLKSANSPRPASWILEKSLDGINFEPW 282
Fly 283 QYFGLSDADCQRRWNLSGQNGK-YVFQNDTE--IICSTQFSKPGPLENGVLHASLLKNRPGA--T 342
Fly 343 DQSPELMKFITTRYIRIRLQGMHSTANQDNSLDWLLDSPSLEKHSFYSLSQLKVSARLDCNGHAN 407
Fly 408 RSHESPDDPLMQCICQHNTCGAQCEQCCPLFQDRPY-----QMGGECEICQCYGHAESCTYDPFL 467
Fly 468 DK-------GICQSCSNNTAGIECEFCEMGFYRELDAPLTDPCLPCSCNPARSTG-GCQSDGGSC 524
Fly 525 NCLEGFQGKNCEECAPGYYG---DDCKRCECDERGSLGSTGSCSGVCQCKLNVEGSTCSECAPGY 586
Fly 587 FDLSAENAEGCTSCWCSGVSQTCHSAKLQTLAFET---LND---WKITDIQRVKPISIPVDAETN 645
Fly 646 RLIFANELDEVEAIYWQASLGYLGNRLTSYGSRLQLVLSWDVIRGDRSGKPTTGPNVILVGKNGL 710
Fly 711 KIAFGDESLDGLGINLNVTLTEVGWYHVPPTVVDIKTRLRRTEGGDYHGESVTRSQFLSVLVSLD 775
Fly 776 AVLIRAA----FHTDQGETSLERAV--IYSGGVELGGKSSSQVEQCLCPAGYTGLSCEGCAFGFK 834
Fly 835 RIYENTSDHQILSKCIPCPCNGHSNSCDLQSGNCGDCMHNTFGDRCERCQLGYYGNPLQGTPNDC 899
Fly 900 KRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDDGYFGNP 964
Fly 965 RQPGSS---CQRCDCAG-------GPCNVTTGECITCRGNTEGWHCERCKLGYWGDPAVGCDPCH 1019
Fly 1020 CHTEGSESGLCDSTDGQCLCKPRYAGQKCDECDVGYANVELRCPSCNCDPLGSLVQDRCDPHTGQ 1084
Fly 1085 CHCKEGVMGAKCHECQDGYFGMNAVAYRMDDLAALRQNSDSDDDEWELVPDTEDPNSESTVACEE 1149
Fly 1150 CHCSSVGSLSS--DCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECN 1212
Fly 1213 PWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQVCDPHNGRCICPKFTRGLGCGQ 1277
Fly 1278 CVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQCQCREGYSGRKCDTCAIGYFGYPECRRCGC 1342
Fly 1343 DAEGSFTQADGSIACDSNGQCPCKSLVVGLKCDTCMQSTFGLSAQNPEGCTRCFCFGRSGECEQS 1407
Fly 1408 DLSWGHIRMAESRNLSVQQIRPHSVPSSDYEYIVVVQMEGSSFHREDAEIQRMNDLSLVPKSTGN 1472
Fly 1473 VSIGAYGQFYHPLYFQLPPQFYGDRTSSYGGFLYFTLITEGAHKPLERNILGQYPLVQLHAHSKL 1537
Fly 1538 LLDFYEYEEFEYSLNVTHRVPLHESFWKYHHTSQAVDRNTL--MAALQNIRHIFIRAFAFADFQE 1600
Fly 1601 VVLQNVHMDAAIYIKGSTNLIAKGVERCKCPKRFDGLSCQDPGRSFYRWRNTTIVESVFIEDLIG 1665
Fly 1666 RAAPCHCNGRSSDCDRETGVCQNCRGNTGGDHCHQCAEGFYGDPNSPHGCQACPCPETNRNFARG 1730
Fly 1731 CNVWDGEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGIQTEGCDVETGRCYCR 1795
Fly 1796 EGVTGLKCDKCQAERHHLVDNGCKICDNCTLLLLDYMELVGNKLRRGMHNMDLTGIPAPYRKLSE 1860
Fly 1861 YESAYEKWNGRHWDFSQTKRRLQDYDSADIL-----KLEAHAENLKFQSRKAVATIGKREF-AIK 1919
Fly 1920 SMREDAVTQQHSVGLL-RSEILQTLSDLHGYGKSAHYLSLPTALKQARFYLQAIREHDQMVQGIR 1983
Fly 1984 STNDCAWKHFYAMGNASDASFDE----SGRLEMLWRDLNQTNHRVVDMRLQVDRVQEVE-NEAED 2043
Fly 2044 VLEHVRNLSIRVGESHQELDELNQRISDHLDPGYLEQGEGLLRLTVQRQIMLNGHLNQL----DG 2104
Fly 2105 YRI--LLNTTLGVKTEQQ--------REVRKHWLPKAEKHASHLLARSN--------EYARKFQP 2151
Fly 2152 TRNGARIAMLASSAHSNITEAINDARLASILAKERVYEAQRTLYPSDGSSMIERAKHSLHRSKQL 2216
Fly 2217 QQ------EALKQMHKSNVLKD-KLHRQEQQVEGIKSTIYDSGLRTNNISGQLQGLSDG----SA 2270
Fly 2271 RRQAKDSLEMADR----TGEQMRAELQKAKD---MQKSIQNMRNSFSNLEPDWEIKLGMAQENIS 2328
Fly 2329 LTQTNLRLANVSLSYLEQQAEK 2350 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | 67/238 (28%) |
EGF_Lam | 401..450 | CDD:238012 | 19/53 (36%) | ||
TNFRSF | <407..507 | CDD:304602 | 34/111 (31%) | ||
EGF_Lam | 505..552 | CDD:238012 | 15/50 (30%) | ||
Laminin_EGF | 550..597 | CDD:278482 | 24/46 (52%) | ||
Laminin_B | 660..798 | CDD:278481 | 33/143 (23%) | ||
EGF_Lam | 851..900 | CDD:238012 | 24/48 (50%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 12/30 (40%) | ||
VSP | 953..1414 | CDD:146106 | 106/472 (22%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 20/50 (40%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 0/47 (0%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 0/39 (0%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | 22/48 (46%) | ||
Laminin_EGF | 1199..1247 | CDD:278482 | 23/47 (49%) | ||
EGF_Lam | 1247..1292 | CDD:238012 | 1/44 (2%) | ||
Laminin_EGF | 1294..1342 | CDD:278482 | 18/47 (38%) | ||
Laminin_EGF | 1340..1392 | CDD:278482 | 2/51 (4%) | ||
Laminin_B | 1486..1611 | CDD:278481 | 23/126 (18%) | ||
EGF_Lam | 1669..1716 | CDD:238012 | 2/46 (4%) | ||
Laminin_EGF | 1718..1767 | CDD:278482 | 3/48 (6%) | ||
EGF_Lam | 1772..1819 | CDD:238012 | 10/46 (22%) | ||
CrfC | <1933..2267 | CDD:223771 | 70/368 (19%) | ||
Laminin_II | 2277..2400 | CDD:283628 | 21/81 (26%) | ||
LamG | 2399..>2492 | CDD:304605 | |||
Laminin_G_2 | 2616..2755 | CDD:280389 | |||
Laminin_G_2 | 2804..2944 | CDD:280389 | |||
Laminin_G_2 | 3038..3169 | CDD:280389 | |||
LamG | 3192..3347 | CDD:238058 | |||
lamc3 | XP_687343.5 | Laminin_N | 46..268 | CDD:278484 | 68/242 (28%) |
EGF_Lam | 269..314 | CDD:238012 | 19/45 (42%) | ||
Laminin_EGF | 326..382 | CDD:278482 | 19/60 (32%) | ||
EGF_Lam | 382..426 | CDD:214543 | 13/44 (30%) | ||
Laminin_EGF | 429..476 | CDD:278482 | 24/46 (52%) | ||
Laminin_B | 540..659 | CDD:278481 | 31/139 (22%) | ||
EGF_Lam | 710..751 | CDD:238012 | 21/42 (50%) | ||
Laminin_EGF | 814..861 | CDD:278482 | 22/143 (15%) | ||
EGF_Lam | 871..921 | CDD:238012 | 22/49 (45%) | ||
Laminin_EGF | 923..971 | CDD:278482 | 26/94 (28%) | ||
EGF_Lam | 970..1010 | CDD:238012 | 18/94 (19%) | ||
ApoLp-III_like | 1233..1386 | CDD:304399 | 36/190 (19%) | ||
PspA | 1388..1607 | CDD:224755 | 52/240 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 66 | 1.000 | Domainoid score | I9990 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |