DRSC/TRiP Functional Genomics Resources

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Protein Alignment wb and NTN3

DIOPT Version :10

Sequence 1:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster
Sequence 2:NP_006172.1 Gene:NTN3 / 4917 HGNCID:8030 Length:580 Species:Homo sapiens


Alignment Length:487 Identity:136/487 - (27%)
Similarity:198/487 - (40%) Gaps:94/487 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 GGALRLLKTEDVYSSSFSGGLYPPLFNVVPRAQISVNATCGQNGAEEYCKQVGAKPCGICNAHSS 197
            |||.|              |..|.|.|.....::..::|||:....            .|:|...
Human    34 GGAPR--------------GCVPGLVNAALGREVLASSTCGRPATR------------ACDASDP 72

  Fly   198 DRAKQRSIQSLISSGSGSGSGSGFEEGWWQSPTLQGGRQFEYVTILLDLKQTFQIFSVWLKSANS 262
            .||..   .:|::|..|:.|..     .|:|.:|.  |....||:.:.|.:.|::..|.|:..::
Human    73 RRAHS---PALLTSPGGTASPL-----CWRSESLP--RAPLNVTLTVPLGKAFELVFVSLRFCSA 127

  Fly   263 PRPASWILEKSLDGINFEPWQYFGLSDADCQRRWN-----LSGQNGKYVFQNDTEIICSTQFSKP 322
            | |||..|.||.|  :...|...|...:.|...:.     .:|..|.     ..|.:|.     |
Human   128 P-PASVALLKSQD--HGRSWAPLGFFSSHCDLDYGRLPAPANGPAGP-----GPEALCF-----P 179

  Fly   323 GPLE----NGVLHASLLKNRPGA--TDQSPELMKFITTRYIRIRLQGMHSTANQDNSLDWLLDSP 381
            .||.    :|:|..|:..:.|..  .|.||.|..::|...:|:.|. ..|||....      |..
Human   180 APLAQPDGSGLLAFSMQDSSPPGLDLDSSPVLQDWVTATDVRVVLT-RPSTAGDPR------DME 237

  Fly   382 SLEKHSFYSLSQLKVSARLDCNGHANRSHESPDDPLMQCICQHNTCGAQCEQCCPLFQDRPYQM- 445
            ::..:| |:.:.|:|..|..|||||:|........|: |.|:|.|.|..|.:|.|.:.|||:|. 
Human   238 AVVPYS-YAATDLQVGGRCKCNGHASRCLLDTQGHLI-CDCRHGTEGPDCGRCKPFYCDRPWQRA 300

  Fly   446 ----GGECEICQCYGHAESCTYDPFLDK-------GICQSCSNNTAGIECEFCEMGFYRELDAPL 499
                ...|..|.|.|||..|.::..|.:       |:|.:|.:||||..|.:|..||||:....|
Human   301 TARESHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRAL 365

  Fly   500 TD--PCLPCSCNPARSTG-GCQSDGGSCNCLEGFQGKNCEECAPGYYGDDCKRCECDERGSLGST 561
            :|  .|..|.|:|..:.| .|....|.|.|.:|..|..|..||||:.........|.:....|.|
Human   366 SDRRACRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPGFQQSRSPVAPCVKTPIPGPT 430

  Fly   562 GSCSGVCQCKLNVEGSTC-SECAP--GYFDLS 590
            ...|       .|:...| |.|.|  |.:.:|
Human   431 EDSS-------PVQPQDCDSHCKPARGSYRIS 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wbNP_723870.1 Laminin_N 153..398 CDD:459653 61/255 (24%)
EGF_Lam 401..450 CDD:238012 19/53 (36%)
EGF_Lam 505..552 CDD:238012 15/47 (32%)
Laminin_EGF 550..597 CDD:395007 11/44 (25%)
Laminin_B 660..813 CDD:459652
EGF_Lam 851..900 CDD:238012
Laminin_EGF <943..971 CDD:395007
Laminin_EGF 974..1018 CDD:395007
EGF_Lam 1017..1065 CDD:238012
Laminin_EGF 1065..>1105 CDD:395007
EGF_Lam 1150..1197 CDD:238012
Laminin_EGF 1199..1247 CDD:395007
EGF_Lam 1247..1292 CDD:238012
Laminin_EGF 1294..1342 CDD:395007
Laminin_EGF 1340..1392 CDD:395007
Laminin_B 1486..1626 CDD:459652
EGF_Lam 1669..1716 CDD:238012
Laminin_EGF 1718..1767 CDD:395007
EGF_Lam 1772..1819 CDD:238012
YhaN <1907..2141 CDD:443752
SMC_prok_B <2123..>2390 CDD:274008
Laminin_II 2279..2400 CDD:368703
LamG 2399..>2492 CDD:473984
LamG 2586..2753 CDD:238058
Laminin_G_2 2804..2944 CDD:460494
LamG 3018..3167 CDD:238058
LamG 3192..3347 CDD:238058
NTN3NP_006172.1 LamNT 34..253 CDD:214532 66/275 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..83 5/35 (14%)
EGF_Lam 254..299 CDD:238012 19/45 (42%)
Laminin_EGF 311..362 CDD:395007 20/50 (40%)
EGF_Lam 373..422 CDD:238012 15/48 (31%)
NTR_like 456..562 CDD:470599 136/487 (28%)
Cell attachment site, atypical. /evidence=ECO:0000255 500..502
Blue background indicates that the domain is not in the aligned region.

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