Sequence 1: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_005553.2 | Gene: | LAMC2 / 3918 | HGNCID: | 6493 | Length: | 1193 | Species: | Homo sapiens |
Alignment Length: | 735 | Identity: | 228/735 - (31%) |
---|---|---|---|
Similarity: | 330/735 - (44%) | Gaps: | 159/735 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 450 EICQCYGHAESCTYDPFLDKGI-----CQSCSNNTAGIECEFCEMGFYRELDAPLTDPCLPCSCN 509
Fly 510 PARSTGGCQSDGGSCNCLEGFQGKNCEECAPGYY---GDDC--------KRCECDERGSLGSTGS 563
Fly 564 C-SGVCQCKLNVEGSTCSECAPGYFDLSAENAEGCTSCWCSGVSQTCHSA------KLQTLAFET 621
Fly 622 LNDWKITDIQR-VKPISIPVDAETNRLIFANELDEVEAIYWQASLGYLGNRLTSYGSRLQLVLSW 685
Fly 686 DVIRGDRSGKPTTGPNVILVGKNGLKIAFGDESLDGLGINLNVTLTEVGWYHVPPTVVDIKTRLR 750
Fly 751 RTEGGDYHGESVTRSQFLSVLVSLDAVLIRAAFHTDQGETS---LERAVIYSGGVELGGKSSSQV 812
Fly 813 EQCLCPAGYTGLSCEGCAFGFKRIYENTSDHQILSKCIPCPCNGHSNSCDLQSGNCGDCMHNTFG 877
Fly 878 D-----RCERCQLGYYGNPLQGTPNDCKRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHA 937
Fly 938 EYICTQCPEGYTGDHCQVCDDGYFGNP---RQPGSSCQRCDC-------AGGPCNVTTGECITCR 992
Fly 993 GNTEGWHCERCKLGYWGD-----PAVGCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKCDECD 1052
Fly 1053 VGYANVELRCPSCNCDPLGSLVQDRCDPHTGQCHCKEGVMGAKCHECQDGYFGMNAVAYRMDDLA 1117
Fly 1118 ALRQNSDSDDDEWELVPDTE 1137 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | |
EGF_Lam | 401..450 | CDD:238012 | 228/735 (31%) | ||
TNFRSF | <407..507 | CDD:304602 | 24/61 (39%) | ||
EGF_Lam | 505..552 | CDD:238012 | 16/57 (28%) | ||
Laminin_EGF | 550..597 | CDD:278482 | 19/47 (40%) | ||
Laminin_B | 660..798 | CDD:278481 | 39/140 (28%) | ||
EGF_Lam | 851..900 | CDD:238012 | 16/53 (30%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 14/30 (47%) | ||
VSP | 953..1414 | CDD:146106 | 64/200 (32%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 22/55 (40%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 17/47 (36%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 4/39 (10%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | |||
Laminin_EGF | 1199..1247 | CDD:278482 | |||
EGF_Lam | 1247..1292 | CDD:238012 | |||
Laminin_EGF | 1294..1342 | CDD:278482 | |||
Laminin_EGF | 1340..1392 | CDD:278482 | |||
Laminin_B | 1486..1611 | CDD:278481 | |||
EGF_Lam | 1669..1716 | CDD:238012 | |||
Laminin_EGF | 1718..1767 | CDD:278482 | |||
EGF_Lam | 1772..1819 | CDD:238012 | |||
CrfC | <1933..2267 | CDD:223771 | |||
Laminin_II | 2277..2400 | CDD:283628 | |||
LamG | 2399..>2492 | CDD:304605 | |||
Laminin_G_2 | 2616..2755 | CDD:280389 | |||
Laminin_G_2 | 2804..2944 | CDD:280389 | |||
Laminin_G_2 | 3038..3169 | CDD:280389 | |||
LamG | 3192..3347 | CDD:238058 | |||
LAMC2 | NP_005553.2 | EGF_Lam | 28..78 | CDD:238012 | 19/52 (37%) |
EGF_Lam | 83..127 | CDD:238012 | 14/43 (33%) | ||
Laminin_EGF | 139..184 | CDD:278482 | 19/47 (40%) | ||
LamB | 245..370 | CDD:214597 | 40/150 (27%) | ||
EGF_Lam | 461..509 | CDD:238012 | 23/67 (34%) | ||
EGF_Lam | 516..565 | CDD:238012 | 19/48 (40%) | ||
EGF_Lam | 572..>604 | CDD:238012 | 15/39 (38%) | ||
Domain II and I | 603..1193 | 16/89 (18%) | |||
PspA_IM30 | 851..1058 | CDD:281941 | |||
SPEC | 891..1111 | CDD:295325 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |