Sequence 1: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000219.2 | Gene: | LAMB3 / 3914 | HGNCID: | 6490 | Length: | 1172 | Species: | Homo sapiens |
Alignment Length: | 1664 | Identity: | 331/1664 - (19%) |
---|---|---|---|
Similarity: | 511/1664 - (30%) | Gaps: | 659/1664 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 556 GSLGSTGSCS-GVC----------QCKLNVEGSTCSECAPGYFDLSAENAEGCTS--------CW 601
Fly 602 C-SGVSQTCHSAKLQTLA--------FETLNDWKITDIQRVKPISIPVDAETNRLIFANELDEVE 657
Fly 658 AIYWQASL--GYLGNRLTSYGSRLQLVLSWDV---IRGD--------RSGKPTT----------- 698
Fly 699 GPNVILVGKNGLKIAFG-DESLDGLGINLNVTLTEVGWYHVPPTVVDIK---TRLRRTEGGDYHG 759
Fly 760 ESVTRSQFLSVLVSLDAVLIRAAFHTDQGETSLERAVIYSGGVELGGKSSSQVEQCLCPAGYTGL 824
Fly 825 SCEGCAFGFKRIYENTSDHQILSKCIPCPCNGHSNSCDLQSGNCGDCMHNTFGDRCERCQLGYYG 889
Fly 890 NPLQGTPNDCKRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQ 954
Fly 955 VCDDGYFGNPRQPGSSCQRCDCAGGPCNVTTGECITCRGNTEGWHCERCKLGYWGDPAVGCDPCH 1019
Fly 1020 CHTEGSESGLCDSTDGQCLCKPRYAGQKCDECDVGY-------ANVELRCPSCNCDPLGSLVQDR 1077
Fly 1078 CDPHTGQCHCKEGVMGAKCHECQDGYFGMNAVAYRMDDLAALRQNSDSDDDEWELVPDTEDPNSE 1142
Fly 1143 STVACEECHCSSVGS-LSSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGS 1206
Fly 1207 RGHECNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQVCDPHNGRCICPKFTR 1271
Fly 1272 GLGCGQCVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQCQCREGYSGRKCDTCAIGYFG-YP 1335
Fly 1336 ECRRCGCDAEGSFTQADGSIACDSNGQCPCKSLVVGLKCDTCMQSTFGLSAQNPEGCTRCFCFGR 1400
Fly 1401 SGECEQSDLSWGHIRMA----------ESRNLS---------VQQIRP-HSVPSSDYEYIVVVQM 1445
Fly 1446 EGSSFHREDAEIQRMNDLSLVPKSTGNVSIGAYGQFYHPLYFQLPPQFYGDRTSSYGGFLYFTLI 1510
Fly 1511 TEGAHKPLERNILGQYPLVQLHAHSKLLLDFYE--YEEFEYSLNVTHRVPLHESFWKYHHTSQAV 1573
Fly 1574 ----DRNTLMAALQNIRHIFIRAFAFADFQEVVLQNVHMDAAIYIKGSTNLIAKGVERCKCPKRF 1634
Fly 1635 DGLSCQDPGRSFYRWRNTTIVESVFIEDLIGRA-----APCHCNGRSSDCDRETGVCQNCRGNTG 1694
Fly 1695 GDHCHQCAEGFYGDPNSPHGCQACPCPETNRNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGYF 1759
Fly 1760 GDPMRYPNTTCQPCNCHPDGIQTEGCDVETGRCYCREGVTGLKCDKCQAERHHLVDNGCKIC--- 1821
Fly 1822 -------------DNCTLL-LLDYMELVGNKLRRGMHNMDLTGIPAPYRKLSEYESAYEKWNGRH 1872
Fly 1873 WDFSQTKRRLQDYDSADILKLEAHAENLKFQSRKAVATIGKREFAIKSMREDAVTQQ-------- 1929
Fly 1930 --HSVGLLRSEILQTLSDLHGYGKSAHYLSLPTAL-KQARFYLQAIRE--HDQMVQGIRSTNDCA 1989
Fly 1990 WKHFYAMGNASDASFDESG--RLEMLWRDLNQTNHRVVDMRLQVDRVQEVENEAEDVLEHVRNLS 2052
Fly 2053 IRVGESHQE-----------------LDELNQRISDHLD 2074 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | |
EGF_Lam | 401..450 | CDD:238012 | |||
TNFRSF | <407..507 | CDD:304602 | |||
EGF_Lam | 505..552 | CDD:238012 | |||
Laminin_EGF | 550..597 | CDD:278482 | 10/51 (20%) | ||
Laminin_B | 660..798 | CDD:278481 | 29/165 (18%) | ||
EGF_Lam | 851..900 | CDD:238012 | 15/48 (31%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 3/27 (11%) | ||
VSP | 953..1414 | CDD:146106 | 124/469 (26%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 11/43 (26%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 11/54 (20%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 20/39 (51%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | 22/47 (47%) | ||
Laminin_EGF | 1199..1247 | CDD:278482 | 17/47 (36%) | ||
EGF_Lam | 1247..1292 | CDD:238012 | 7/44 (16%) | ||
Laminin_EGF | 1294..1342 | CDD:278482 | 20/48 (42%) | ||
Laminin_EGF | 1340..1392 | CDD:278482 | 3/51 (6%) | ||
Laminin_B | 1486..1611 | CDD:278481 | 20/130 (15%) | ||
EGF_Lam | 1669..1716 | CDD:238012 | 8/46 (17%) | ||
Laminin_EGF | 1718..1767 | CDD:278482 | 9/48 (19%) | ||
EGF_Lam | 1772..1819 | CDD:238012 | 9/46 (20%) | ||
CrfC | <1933..2267 | CDD:223771 | 30/164 (18%) | ||
Laminin_II | 2277..2400 | CDD:283628 | |||
LamG | 2399..>2492 | CDD:304605 | |||
Laminin_G_2 | 2616..2755 | CDD:280389 | |||
Laminin_G_2 | 2804..2944 | CDD:280389 | |||
Laminin_G_2 | 3038..3169 | CDD:280389 | |||
LamG | 3192..3347 | CDD:238058 | |||
LAMB3 | NP_000219.2 | LamNT | 20..248 | CDD:214532 | 54/298 (18%) |
EGF_Lam | 249..304 | CDD:238012 | 19/100 (19%) | ||
EGF_Lam | 315..369 | CDD:238012 | 21/88 (24%) | ||
Laminin_EGF | 379..428 | CDD:278482 | 22/81 (27%) | ||
Laminin_EGF | 431..478 | CDD:278482 | 21/46 (46%) | ||
Laminin_EGF | 481..534 | CDD:278482 | 26/94 (28%) | ||
EGF_Lam | 534..576 | CDD:214543 | 17/41 (41%) | ||
Domain II | 579..785 | 49/300 (16%) | |||
Domain alpha | 786..816 | 7/43 (16%) | |||
Domain I | 817..1170 | 76/436 (17%) | |||
MA | 844..1071 | CDD:214599 | 50/283 (18%) | ||
MCP_signal | 862..1076 | CDD:304920 | 48/264 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |