Sequence 1: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101707.2 | Gene: | Lama1 / 316758 | RGDID: | 1307207 | Length: | 3083 | Species: | Rattus norvegicus |
Alignment Length: | 3495 | Identity: | 998/3495 - (28%) |
---|---|---|---|
Similarity: | 1533/3495 - (43%) | Gaps: | 673/3495 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 128 GGGAGGGALRLLKTE-DVYSSSFSGGLYPPLFNVVPRAQISVNATCGQNGAEEYCKQVGAKP--- 188
Fly 189 -----CGICNAHSSDRAKQRSIQSLISSGSGSGSGSGFEEGWWQSPTLQGGRQFEYVTILLDLKQ 248
Fly 249 TFQIFSVWLKSANSPRPASWILEKSLDGINFEPWQYFGLSDADCQRRWNLSGQNGKYVFQNDTEI 313
Fly 314 ICSTQFSKPGPLENGVLHASLLKNRPGATDQSPELMKFITTRYIRIRLQGMHSTANQD------- 371
Fly 372 --NSLDWLLDSPSLEKHSFYSLSQLKVSARLDCNGHANRSHESPDDPLMQCICQHNTCGAQCEQC 434
Fly 435 CPLFQDRPYQMG-----GECEICQCYGHAESCTYDPFLDK--------------GICQSCSNNTA 480
Fly 481 GIECEFCEMGFYR-ELDAPLTD-PCLPCSCNPARSTGG-CQSDG-----------GSCNCLEGFQ 531
Fly 532 GKNCEECAPGYYG-DDCKRCECDERGSLGSTGSCSGVCQCKLNVEGSTCSECAPGYFDLSAENAE 595
Fly 596 GCTSCWCSGVSQTCHSAKLQTLAFETLNDWKITD-------------IQRVKPISIPVDAETNRL 647
Fly 648 IFANELDEVEAIYWQASLGYLGNRLTSYGSRLQLVLSWDVIRGDRSGKPTTGPNVILVGKNGLKI 712
Fly 713 AFGDESLDGLGIN-----LNVTLTEVGWYHVPPTVVDIKTRLRRTEGGDYHGESVTRSQFLSVLV 772
Fly 773 SLDAVLIRAAFHTDQGETSLERAVIYSGGVELGGKS--------SSQVEQCLCPAGYTGLSCEGC 829
Fly 830 AFGFKRIYENTSDHQIL--SKCIPCPCNGHSNSCDLQSGNCGDCMHNTFGDRCERCQLGYYGNPL 892
Fly 893 QGTPNDCKRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCD 957
Fly 958 DGYFGNPRQPGSSCQRCDCAG-------GPCNVTTGECITCRGNTEGWHCERCKLGYWGD--PAV 1013
Fly 1014 GCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKCDECDVGYANVELRCPSCNCDPLGSLVQDRC 1078
Fly 1079 DPHTGQCHCKEGVMGAKCHECQDGYFGMNAVAYRMDDLAALRQNSDSDDDEWELVPDTEDPNSES 1143
Fly 1144 TVACEECHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRG 1208
Fly 1209 HECNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQVCDPHNGRCICPKFTRGL 1273
Fly 1274 GCGQCVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQCQCREGYSGRKCDTCAIGYFGYPECR 1338
Fly 1339 RCGCDAEGSFTQAD------GSIAC-DSNGQCPCKSLVVGLKCDTCMQSTFGLSAQNPEGCTRCF 1396
Fly 1397 CFGRSGECEQSDLSWGHIRMAESRNLSVQQIRPHSVPSSDYEYIVVVQMEGSSFHRE----DAEI 1457
Fly 1458 QRMNDLSLVPKSTGNVSIGAYGQFYHPLYFQLPPQFYGDRTSSYGGFLYFTLITEGAHKPLERNI 1522
Fly 1523 LGQYPLVQLH-AHSKLLLDFYEYEEFEYSLNVTHRVPLHESFWKYHH--TSQAVDRNTLMAALQN 1584
Fly 1585 IRHIFIRAFAFADFQEVVLQNVHMDAA--IYIKGSTNLIAKGVERCKCPKRFDGLSCQDPGRSFY 1647
Fly 1648 RWRNTTIVESV--FIEDLIGRAAPCHCNGRSSDCDRETGVCQNCRGNTGGDHCHQCAEGFYGDP- 1709
Fly 1710 NSPHGCQACPCP-ETNRNFARGCNVWDGEVS--C-VCKPGYTGRLCERCQAGYFGDPMRYPNTTC 1770
Fly 1771 QPCNCHPDGIQTEGCDVETGRCYCREGVTGLKCDKCQAERHHLVDNGCKICDN-CTLLLLDYMEL 1834
Fly 1835 VGNKLRRGMHNMDLTGIP-APYRKLSEYESAYEKWNGRHWDFSQTKRRLQDYDSADIL--KLEAH 1896
Fly 1897 AENLK------FQSRKAVATIGKR---------------EFAIKSMREDAVTQQHSVG------- 1933
Fly 1934 -LLRSEILQTLSDLHGYGKSAHYLSL----PTALKQARFYLQAIREHDQMVQ----GIRSTNDCA 1989
Fly 1990 WKHFYAMGNASD------ASFDESGRLEMLWR---------------DLNQTNHRVVDMRLQVDR 2033
Fly 2034 VQEVENEAEDVLEHVRNLSIRVGESHQELDEL---NQRISDHLDPGYLEQGEGLLRLTVQRQIML 2095
Fly 2096 NGHLNQLDGYRILLNTTLGVKTEQQREVRKHWLPKAEKHASHLLARSNEYARKFQPTRNGARIAM 2160
Fly 2161 LASSAHSNITEAINDARLASILAKERVYEAQRTLYPSDGSSMIERAKHSLHRSKQLQQEALKQMH 2225
Fly 2226 KSNVLKDKLHRQEQQVEGIKSTIYDSGLRTNNISGQLQGLSDGSARRQAKDSLEMADRTGEQMRA 2290
Fly 2291 ELQKAKDM--------QKSIQNMRN---SFSNLEPDWEIKLGMAQENISL----TQTNLRLANVS 2340
Fly 2341 LSYLEQQAE------KEQQVFEVWNNSMAQQLQQLRDQIAKARHAAEAIDVSLESLGPKCIRSYL 2399
Fly 2400 PASYGLSTSNKIRMSFALSNHLESSPLIHL-ASSEGRHITLELYKRRVRLVWNLGGTTATVTHPM 2463
Fly 2464 VVHTRDPKYDDAWYHVEANRTLNLGSLVVRRMNNYGELTPPNPVIITGSTDTEHTRFYQSRSDRI 2528
Fly 2529 SLGGFASKDLQFTPGLNVV-----VHQVEVDNKPLGLWNFVTSEGSCGGSMVGAKESSASSTARH 2588
Fly 2589 FNGLGYAQLMKTRPRPTRKNLFSVQMTFRTLDENALLFLAVDDKNNRSVSVTLSRGRIMFRIDYG 2653
Fly 2654 DESKLEINTTKKYNVGQWIKIEAAREFSAKRSTENGMLRV-----NNDRPISGAPTLPVNIHLLP 2713
Fly 2714 DLSKTVYYLGGVPPGFTSGTSKAPG---ADNPFLGCMKDVQVNGETYDPLESSSYYGVEPSCK-N 2774
Fly 2775 MITKAGFSGNGYLELPSQSLRKRSNTALVFRTLQPDCLLLLAAYPPEILGDYDAKDIKGN----- 2834
Fly 2835 -FSISLVDGQLHVWVNS--GRSFIK--MSSNSSQMNDGEFHVVHLIKTGRKLELMVDDE------ 2888
Fly 2889 ---LQEIRNLNGNPTVVSLPRDAGGLYIGGAPPHESYTPLAPTFVNLEGAIRDVVFNNRTINFND 2950
Fly 2951 ALTFANVQIGRNGPLMGSLKGGLYDVLLKTEPMIG-----------KSFTASPEGCKRIGSYSYE 3004
Fly 3005 PNAFKFGDDIYSYSQLKLP-ERHFWQRNFHLSFDFRSFYPNGMLYLSPGSKEKPKHYVALVLKDG 3068
Fly 3069 QL-VLVVRGRRREELQLTAKLNDGEWHRVTISCHDRKVTMSVEIGRTDQKT----SAQMKLPKKI 3128
Fly 3129 GASQLLLVGGLPQSPVKVSSDLYVRLEPFKGCLRRVSINNNTQDLARPGKHSNVGQCFPTVERGS 3193
Fly 3194 YFPGDAY-AIYKKNFNVGKYLDLETEFRTSELSGILLSVSDPNGFPALSLELHNGNIIFSCDPGN 3257
Fly 3258 GAPMRVESSLPTKYALCDNKWHNISALYDGEQIVLRIDQLPAVISVGNQGNAGKVQTRSPLYIGG 3322
Fly 3323 LPESAPSGSLISRENFKGCIRHVSI-RNERRDWIEME---DLRNVLLSEC 3368 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | 95/248 (38%) |
EGF_Lam | 401..450 | CDD:238012 | 19/53 (36%) | ||
TNFRSF | <407..507 | CDD:304602 | 41/120 (34%) | ||
EGF_Lam | 505..552 | CDD:238012 | 19/59 (32%) | ||
Laminin_EGF | 550..597 | CDD:278482 | 19/46 (41%) | ||
Laminin_B | 660..798 | CDD:278481 | 39/142 (27%) | ||
EGF_Lam | 851..900 | CDD:238012 | 27/48 (56%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 15/27 (56%) | ||
VSP | 953..1414 | CDD:146106 | 148/476 (31%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 23/52 (44%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 17/47 (36%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 3/39 (8%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | 7/46 (15%) | ||
Laminin_EGF | 1199..1247 | CDD:278482 | 14/47 (30%) | ||
EGF_Lam | 1247..1292 | CDD:238012 | 17/44 (39%) | ||
Laminin_EGF | 1294..1342 | CDD:278482 | 20/47 (43%) | ||
Laminin_EGF | 1340..1392 | CDD:278482 | 24/58 (41%) | ||
Laminin_B | 1486..1611 | CDD:278481 | 33/127 (26%) | ||
EGF_Lam | 1669..1716 | CDD:238012 | 24/47 (51%) | ||
Laminin_EGF | 1718..1767 | CDD:278482 | 23/52 (44%) | ||
EGF_Lam | 1772..1819 | CDD:238012 | 18/46 (39%) | ||
CrfC | <1933..2267 | CDD:223771 | 73/373 (20%) | ||
Laminin_II | 2277..2400 | CDD:283628 | 33/143 (23%) | ||
LamG | 2399..>2492 | CDD:304605 | 20/93 (22%) | ||
Laminin_G_2 | 2616..2755 | CDD:280389 | 41/146 (28%) | ||
Laminin_G_2 | 2804..2944 | CDD:280389 | 40/158 (25%) | ||
Laminin_G_2 | 3038..3169 | CDD:280389 | 34/135 (25%) | ||
LamG | 3192..3347 | CDD:238058 | 51/155 (33%) | ||
Lama1 | NP_001101707.2 | LamNT | 25..275 | CDD:214532 | 100/265 (38%) |
EGF_Lam | 277..324 | CDD:238012 | 18/46 (39%) | ||
Laminin_EGF | 404..463 | CDD:278482 | 18/58 (31%) | ||
Laminin_EGF | 461..507 | CDD:278482 | 19/46 (41%) | ||
Laminin_B | 575..703 | CDD:278481 | 42/154 (27%) | ||
EGF_Lam | <715..739 | CDD:214543 | 13/29 (45%) | ||
EGF_Lam | 748..796 | CDD:238012 | 27/48 (56%) | ||
Laminin_EGF | 798..853 | CDD:278482 | 32/68 (47%) | ||
EGF_Lam | 855..907 | CDD:238012 | 22/51 (43%) | ||
Laminin_EGF | 909..955 | CDD:278482 | 21/128 (16%) | ||
Laminin_EGF | 958..1005 | CDD:278482 | 21/96 (22%) | ||
EGF_Lam | 1004..1049 | CDD:238012 | 17/45 (38%) | ||
Laminin_EGF | 1051..1099 | CDD:278482 | 20/47 (43%) | ||
Laminin_EGF | 1097..1154 | CDD:278482 | 24/58 (41%) | ||
Laminin_B | 1225..1351 | CDD:278481 | 33/128 (26%) | ||
Laminin_EGF | 1410..1456 | CDD:278482 | 23/45 (51%) | ||
Laminin_EGF | 1459..1513 | CDD:278482 | 23/55 (42%) | ||
Laminin_EGF | 1516..>1553 | CDD:278482 | 15/37 (41%) | ||
Laminin_I | 1574..1825 | CDD:283627 | 47/261 (18%) | ||
SPEC | 1613..1861 | CDD:295325 | 50/262 (19%) | ||
Laminin_I | 1838..2092 | CDD:283627 | 69/327 (21%) | ||
Laminin_II | 2018..2152 | CDD:283628 | 31/141 (22%) | ||
LamG | 2136..2285 | CDD:238058 | 29/162 (18%) | ||
LamG | 2314..2470 | CDD:238058 | 52/176 (30%) | ||
LamG | 2495..2659 | CDD:238058 | 48/182 (26%) | ||
Laminin_G_1 | 2751..2880 | CDD:278483 | 34/138 (25%) | ||
LamG | 2900..3053 | CDD:238058 | 51/155 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 74 | 1.000 | Domainoid score | I8901 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1036 | 1.000 | Inparanoid score | I252 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D128982at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004257 | |
OrthoInspector | 1 | 1.000 | - | - | otm45962 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100395 | |
Panther | 1 | 1.100 | - | - | O | PTHR10574 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X2997 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.830 |