DRSC/TRiP Functional Genomics Resources

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Protein Alignment wb and Ntng2

DIOPT Version :10

Sequence 1:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster
Sequence 2:XP_006233862.1 Gene:Ntng2 / 311836 RGDID:1307089 Length:635 Species:Rattus norvegicus


Alignment Length:582 Identity:126/582 - (21%)
Similarity:197/582 - (33%) Gaps:208/582 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 TCGQNGAEEYCKQVGAKPC-GICNAHSSDRAKQRSIQSLISSGSGSGSGSGFEEGWWQ---SP-- 229
            ||| :..|.:|.......| ..|:|.:.|.|..   ..|:......|..:.::...|.   ||  
  Rat    60 TCG-DPPERFCSHENPYLCSNECDASNPDLAHP---PRLMFDREDEGLATYWQSVTWSRYPSPLE 120

  Fly   230 ---TLQGGRQFEYVTILLDLKQTFQIFSVWLKSANSPRPASWILEKSLD-GINFEPWQYFGLSDA 290
               ||...:..|...   |:..||:.          .||...:|||||| |..::|:|::.   .
  Rat   121 ANITLSWNKSVELTD---DVVMTFEY----------GRPTVMVLEKSLDNGRTWQPYQFYA---E 169

  Fly   291 DCQRRWNLSGQNGKYVFQNDT-EIICSTQFSK---------------------PGP-LENGVLHA 332
            ||...:.:|.:..:.:..:.. .::|:.::|:                     .|| |.|     
  Rat   170 DCMEAFGMSARRARDMSPSSAHRVLCTEEYSRWAGSKKEKHVRFEVRDRFAIFAGPDLRN----- 229

  Fly   333 SLLKNRPGATDQSPELMKFITTRYIRIRL--QGMHSTANQDNSLDWLLDSPSLEKHSFYSLSQLK 395
              :.|.....:.:..|.:|.|...:|:||  ..:..|         .:...:|.|: ||::|.::
  Rat   230 --MDNLYTRMESAKGLKEFFTFTDLRMRLLRPALGGT---------YVQRENLYKY-FYAISNIE 282

  Fly   396 VSARLDCNGHANRSHESPDDPLMQCICQHNTCGAQCEQCCPLFQDRPYQMGG------------- 447
            |..|..||.|||..  :..:..:||.|:|||.|..|.:|...|:.|.::.|.             
  Rat   283 VIGRCKCNLHANLC--TVREGSLQCECEHNTTGPDCGKCKKNFRTRAWRAGSYLPLPHGSPNACA 345

  Fly   448 ----------------------------------------------------------------- 447
                                                                             
  Rat   346 AAGSAFGSTSRSRKIPAPKAPMATEATRRGPVTSIPSTSTIQVPTAPSTPHPTGQTKPTTVAPLG 410

  Fly   448 --------------------------------------------ECEICQCYGHAESCTYDPFLD 468
                                                        |.:.|:||||:..|:|..||:
  Rat   411 DSSFWPQVSSSAEAVTIPVAIPSQAKDSTLFQLKPRSPQVIPIEEFQDCECYGHSNRCSYIDFLN 475

  Fly   469 KGICQSCSNNTAGIECEFCEMGFYRELDAPLTDP--CLPCSCNPARSTGGCQSDGGSCNCLEGFQ 531
            ...|.||.:||.|..|:.|.:|:||...|.|.|.  |:.|:||...|.....::.|.|.|.||..
  Rat   476 VVTCVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGSVHDRCNETGFCECREGAV 540

  Fly   532 GKNCEECAP-GYYGDDCKRCECDERGSLGSTGSCSGVCQCKLNVEGSTCSECAPGYFDLSAE 592
            |..|::|.| .|:...|....||:...|...|   |.||     :...|: |.|||..:..|
  Rat   541 GPKCDDCLPTHYWRQGCYPNVCDDDQLLCQNG---GTCQ-----QNQRCA-CPPGYAGIRCE 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wbNP_723870.1 Laminin_N 153..398 CDD:459653 55/261 (21%)
EGF_Lam 401..450 CDD:238012 18/170 (11%)
EGF_Lam 505..552 CDD:238012 15/47 (32%)
Laminin_EGF 550..597 CDD:395007 13/43 (30%)
Laminin_B 660..813 CDD:459652
EGF_Lam 851..900 CDD:238012
Laminin_EGF <943..971 CDD:395007
Laminin_EGF 974..1018 CDD:395007
EGF_Lam 1017..1065 CDD:238012
Laminin_EGF 1065..>1105 CDD:395007
EGF_Lam 1150..1197 CDD:238012
Laminin_EGF 1199..1247 CDD:395007
EGF_Lam 1247..1292 CDD:238012
Laminin_EGF 1294..1342 CDD:395007
Laminin_EGF 1340..1392 CDD:395007
Laminin_B 1486..1626 CDD:459652
EGF_Lam 1669..1716 CDD:238012
Laminin_EGF 1718..1767 CDD:395007
EGF_Lam 1772..1819 CDD:238012
YhaN <1907..2141 CDD:443752
SMC_prok_B <2123..>2390 CDD:274008
Laminin_II 2279..2400 CDD:368703
LamG 2399..>2492 CDD:473984
LamG 2586..2753 CDD:238058
Laminin_G_2 2804..2944 CDD:460494
LamG 3018..3167 CDD:238058
LamG 3192..3347 CDD:238058
Ntng2XP_006233862.1 Laminin_N 60..285 CDD:459653 55/261 (21%)
EGF_Lam 286..332 CDD:238012 17/47 (36%)
PHA03247 <334..452 CDD:223021 0/117 (0%)
EGF_Lam 459..507 CDD:238012 21/47 (45%)
Laminin_EGF 515..562 CDD:395007 15/46 (33%)
Blue background indicates that the domain is not in the aligned region.

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