DRSC/TRiP Functional Genomics Resources

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Protein Alignment wb and Lama3

DIOPT Version :9

Sequence 1:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster
Sequence 2:NP_001380677.1 Gene:Lama3 / 307582 RGDID:628776 Length:3333 Species:Rattus norvegicus


Alignment Length:3844 Identity:916/3844 - (23%)
Similarity:1435/3844 - (37%) Gaps:1150/3844 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 MLAIASSESVTKKKPPQRRRNGKLQKSGGGAGGGALRLLKTEDVYSSSFSGGLYPPLFNVVPRAQ 165
            :|.::...||..:.||                  |.||             .|:||.||:...|:
  Rat    22 LLRMSPCWSVVAQDPP------------------AARL-------------SLHPPYFNLAQAAK 55

  Fly   166 ISVNATCGQNG-------AEEYCKQVGAKP------------CGICNAHSSDRAKQRSIQSLISS 211
            |...||||:.|       .|.:||.||...            |..||:..|     |.....|.:
  Rat    56 IWATATCGERGLDVSRPRPELFCKLVGGPTAPGSGHTIQGQFCDYCNSEDS-----RKAHPAIHA 115

  Fly   212 GSGSGSGSGFEEGWWQSPTLQGGRQFEYVTILLDLKQTFQIFSVWLKSANSPRPASWILEKSLD- 275
            ..||       |.|||||.|..|.|:..|.:.|||.|.|.:..:.:|.||||||..|:||:|:| 
  Rat   116 IDGS-------ERWWQSPPLSSGTQYNKVNLTLDLGQLFHVAYILIKFANSPRPDLWVLERSVDF 173

  Fly   276 GINFEPWQYFGLSDADCQRRWNLSGQNGKYVFQNDTEIICSTQFSKPGPLENGVLHASLLKNRPG 340
            |..:.|||||..|..||.:::   ||........|.:::|.|::|:..|||||.:..||:..|||
  Rat   174 GNTYSPWQYFAHSRGDCLQQF---GQEANMAVTRDDQVLCVTEYSRIVPLENGEIVVSLINGRPG 235

  Fly   341 ATD--QSPELMKFITTRYIRIR-------LQGMHSTANQDNSLDWLLDSPSLEKHSFYSLSQLKV 396
            |..  .|..|.:|.....||:|       |..:.|.|.:|         |::.:..:||:..:.|
  Rat   236 AKHFAFSDTLREFTKATNIRLRFLRTNTLLGHLISKAERD---------PTVTRRYYYSIKDISV 291

  Fly   397 SARLDCNGHANRSHESPDDPLMQ--CICQHNTCGAQCEQCCPLFQDRPYQ-----MGGECEICQC 454
            ..|..|||||...  |.|:|..|  |.|||:|||..|.:||..:..||::     ...|||.|.|
  Rat   292 GGRCVCNGHAEAC--SADNPEKQFRCKCQHHTCGDTCNRCCAGYNQRPWRPAAQDQHNECEACNC 354

  Fly   455 YGHAESCTYDPFLDK--------------GICQSCSNNTAGIECEFCEMGFYRELDAPL--TDPC 503
            :|||..|.||..:.:              |:|..|.:||||:.||.|..|::|....|:  ...|
  Rat   355 HGHAVDCYYDEAVSRQQASLNSKGVYTGGGVCIDCQHNTAGVNCEKCAKGYFRPHGVPVEALHGC 419

  Fly   504 LPCSCNPARSTGGCQSDGGSCNCLEGFQGKNCEECAPGYYG------------------------ 544
            :||||:|.|: ..|....|.|:|...|.|..||.||.|||.                        
  Rat   420 IPCSCDPDRA-DECDQGSGRCHCKPNFSGDFCETCADGYYNFPFCLRIPVFPDYTLNPEDPMAGN 483

  Fly   545 ----------------DD---------------------------CKRCECDERGSL-------- 558
                            ||                           |:.|:|...||.        
  Rat   484 IKGCDCNLEGVLPEICDDRGRCLCRPGVEGPRCDSCRSGSYSFPICQACQCSTSGSYPVPCDPET 548

  Fly   559 ----------------------------GSTGSCS---------GVCQCKLNVEGSTCSECAPGY 586
                                        ||:..|.         |.|||||:|...|||.|.|.|
  Rat   549 GQCECLPGVTGRRCDRCLSGAYDFPYCQGSSSVCDPAGTMDSSLGYCQCKLHVTSPTCSVCKPLY 613

  Fly   587 FDLSAENAEGCTSCWC------SGVSQ--------TCHSAKLQTLAFETLNDWKITDIQRVKPIS 637
            :||:.||..||:.|.|      ||:.:        :| .|.:...|.:|..|             
  Rat   614 WDLAKENPRGCSECQCHEAGTVSGIGECGQEDGDCSC-KAHVTGDACDTCAD------------- 664

  Fly   638 IPVDAETNRLIFANELDEVEAIYWQASLGYLGNRLTSY----------GSRLQLVLSW------- 685
                                        ||.....::|          |..|..:.|.       
  Rat   665 ----------------------------GYFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGECQC 701

  Fly   686 -DVIRGDRSGKPT------------------TGPNVILVGKNGLKIAFGDESLDGLGINLNVTLT 731
             :.|.|.:..:|.                  |||       ||..:.||.:.|:         ..
  Rat   702 REHIEGKQCQRPESNCYFPDLHHMKYEVEGGTGP-------NGRDLRFGFDPLE---------FP 750

  Fly   732 EVGWY-HVPPTVVDIKTRLRRTEGGDYHGESVTRSQFLSVLVSLDAVLIRAAFHTDQG-ETSLER 794
            |..|. :||.|.|..:.::|.|         |.:|.     :||..:::|   :.:.| |....|
  Rat   751 EFSWRGYVPMTSVQNEVKVRLT---------VRKSS-----LSLFRIILR---YINPGMEEVSGR 798

  Fly   795 AVIYSGGVELGGKS-SSQVEQCLCPA------------GY---------TGLSC---EGCAFGF- 833
            ..:||.    .||| :||.::...|.            |:         |.::|   ||....: 
  Rat   799 ITVYSS----RGKSDASQSKEITFPPSKEPAFVTVPGNGFADPFSITPGTWIACIQVEGVLLDYL 859

  Fly   834 ----KRIYE----------------NTSDHQILSKCIP---------C----------------- 852
                :..||                :..|:.:|.:.:|         |                 
  Rat   860 VLLPRDYYEAFALQVPVTEPCAHTGSPQDNCLLYQHLPLTRFSCTLACEATHFLIDGERRPLAVR 924

  Fly   853 -PCNGHSNSCDLQSGNCGDCMHNTFGDRCERCQLGYY-----------------------GNPLQ 893
             |...|....|| ||...: :|.    |....|:|:|                       .:.|.
  Rat   925 QPMPTHPAMVDL-SGTEVE-LHL----RLRVPQIGHYVVMLEYATEVDQLFVVDVNLKSPESALA 983

  Fly   894 GTPN--DCKRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAE-------------YICTQ 943
            |..|  .||            :|..|:....:.:.....:||:..|:             :||..
  Rat   984 GQVNIYSCK------------YSILCRSVVIDSLSRTAVYELLADADVQLKVHAARFLLHHICVI 1036

  Fly   944 CPEGYTGD------HCQVCDDGYFGNPRQPGSSCQRCDCAGGPCNVT--TGECITCRGNTEGWHC 1000
            ..|.::.:      ||...    :|....|.:||         .:||  |.........|.|.|.
  Rat  1037 PAEEFSTEYLRPQVHCIAS----YGQSANPSASC---------VSVTHETPPTALILDATSGGHF 1088

  Fly  1001 ERCKLGYWGDPAVGCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKCDECDVGYANVELRCPSC 1065
            ....                |...|.:   |.|:|                      |.|:.|. 
  Rat  1089 SPLP----------------HEPSSPA---DVTNG----------------------VTLKAPQ- 1111

  Fly  1066 NCDPLGSLVQDRCDPHTGQ----CHCKEG----------VMGAK----------CHE---CQDGY 1103
            |...|..|:     ||.|:    .|..:.          |.|.:          |..   |||..
  Rat  1112 NQVTLRGLI-----PHLGRHVFVVHFYQAEHPGFPTEVVVDGGRRWSGSFRASFCPHLLGCQDQV 1171

  Fly  1104 FGMNAVAYRMD--DLAALRQNSD-------------SDDDEWELVPDTE-DPNSESTVACEECHC 1152
            .....|.:.:.  |:|...:..|             ::|.::.::..|. |.:||...:|     
  Rat  1172 ISEGQVEFDISEADVAVTVKIPDGKSLTLVRVLVVPAEDYDYHILHRTSVDKSSEFISSC----- 1231

  Fly  1153 SSVGSLSSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTA--GEGCRDCRCDPHGSRGHECNPWT 1215
             ...|...|....:|.|...|.              :|.|  ..|...|.|.|.|:..|.|:|..
  Rat  1232 -GGDSFYIDPQAASGFCKNSAR--------------SLVAFYHNGAVPCECHPAGAAVHHCSPEG 1281

  Fly  1216 GQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQVCDPHNGRCICPKFTRGLGCGQCVP 1280
            |||.|:..|.|:.|..|..|::||     ..|..|....::|:...|:|:||..|....|..|..
  Rat  1282 GQCPCRPNVIGRQCTRCATGYYGF-----PHCKPCNCGRRLCEEVTGKCLCPPNTVRPQCEVCEM 1341

  Fly  1281 GTWGWQARLGCRECECDHIGSIG---QQCSTGDGQCQCREGYSGRKCDTCAIGYFGYPECRRCGC 1342
            .::.:....||..|.|...|::.   .:|....|||:|:...:|::||.||.|::.:|||..|.|
  Rat  1342 NSFNFHPVAGCEVCNCSRKGTVEAAVSECDRDSGQCRCKPRVTGQQCDKCAPGFYHFPECVPCSC 1406

  Fly  1343 DAEGSFTQADGSIACDSNGQCPCKSLVVGLKCDTCMQSTFGLSAQNPEGCTRCFCFGRSGECEQS 1407
            :.:|:    :..:.....|.|.||..|.|.:|..|.:.:|.|.:.||||||||||||.:.:|..|
  Rat  1407 NRDGT----EPGVCDPGTGACMCKENVEGPQCQFCREGSFYLDSANPEGCTRCFCFGVNTDCRSS 1467

  Fly  1408 DLSWGHIRMAESRNLSVQQIRPHSVPSSDYEYIVVVQMEGSSFHREDAEIQRMNDLSLVPKSTGN 1472
                 |.|.|:..::...::.     ::|...:.|      ||:.....:  :.||..:|.|.  
  Rat  1468 -----HKRRAKFVDMMGWRLE-----TADGVDVPV------SFNPSSNSV--VADLQELPSSV-- 1512

  Fly  1473 VSIGAYGQFYHPLYFQLPPQFYGDRTSSYGGFLYFTLITEGAHKPLERNILGQYPLVQL-HAHSK 1536
                      |...:..||.:.||:.|||||:|.:...:.|.  |.:..:|.:.|.||| ..|..
  Rat  1513 ----------HSASWVAPPSYLGDKVSSYGGYLTYQAKSFGL--PGDMVLLEKQPDVQLIGQHMS 1565

  Fly  1537 LLLDFYEYEEFEYSLNVTH--RVPLHESFWKYHHTSQAVDRNTLMAALQNIRHIFIRAFAFADFQ 1599
            ::    ..|..:...:..|  ||.:.|..:::...|..|.|..|||.|.::..:.||...|.:.|
  Rat  1566 II----HAEPSDPRPDRPHHGRVQVVEGNFRHAGNSAPVSREELMAVLSSLEGLHIRGLHFTETQ 1626

  Fly  1600 EVVLQNVHMDAAIYIKGSTNLIAKGVERCKCPKRFDGLSCQDPGRSFYRWRNTTIVESVFIEDL- 1663
            .:.|..|.::.|........  |..||.|.||..:.|.|||.....:||             |: 
  Rat  1627 RLTLGEVGLEEASDTGSGPR--AHLVEMCTCPPDYTGDSCQGCRPGYYR-------------DIK 1676

  Fly  1664 ---IGRAAPCHCNGRSSDCDRETGVCQNCRGNTGGDHCHQCAEGFYGDPNSPHG-CQACPCPETN 1724
               .||..||:|||.|:.|...:|||.||:.||.|:||.:|.||:||  ::.|| |:.||||.||
  Rat  1677 SFPAGRCVPCNCNGHSNRCQDGSGVCINCQHNTAGEHCERCQEGYYG--SAIHGSCRVCPCPHTN 1739

  Fly  1725 RNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGIQTEGCDVET 1789
             :||.||.|..|.|.|.|||||||..||||..||||:|.:: ..:||||||:.:| |...||..|
  Rat  1740 -SFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQKF-GGSCQPCNCNSNG-QFGTCDPLT 1801

  Fly  1790 GRCYCREGVTGLKCDKCQAERHHLVDNGCKICDNCTLLLLDYMELVGNKLRRGMHNMDLTGIPAP 1854
            |.|..:|...|...::|..            ||:|.:.||:.:..:|.:||.         :.:.
  Rat  1802 GDCVSQEPKDGSPAEECDD------------CDSCVMTLLNDLVSMGEELRL---------VKSR 1845

  Fly  1855 YRKLSEYESAYEKWNGRHWDFSQTKRRLQDYDSA--------DILKLEAHAENLKFQ-------- 1903
            .:.||....|.|:...........:.:|..:.||        |.|:.|....|.:|:        
  Rat  1846 LQGLSVSTGALEQIRHVEMQAKDLRNQLLGFRSAISSHGSKMDGLEKELSHLNQEFETLQEKAQV 1910

  Fly  1904 -SRKAVATIGKREFAIKSMREDAVTQQHSVGLLRSEILQTLSDLH----------GYGKSAHYLS 1957
             ||||.......:..|::.:|           |..:|...:.::|          |.|     :.
  Rat  1911 NSRKAQTLYNNIDQTIQNAKE-----------LDMKIKNIIQNVHILLKQIARPGGEG-----MD 1959

  Fly  1958 LPTA-----LKQARFYLQAIREHD----------------QMVQGIRSTNDCAWKHFYAMGNASD 2001
            ||..     |.:|:..|:.:|..|                .::..||:     |...:.:.|   
  Rat  1960 LPVGDWSRELAEAQRMLRELRGRDFKKHLQEAEAQKMEAQLLLNRIRT-----WLESHQVEN--- 2016

  Fly  2002 ASFDESGRLEMLWRDLNQTNHRVVDMR-------LQVDRVQEVENEAEDVLEHVRNLSIRVGESH 2059
                 :|.|:.:...||....::.|:|       .|..:...:.:|.|.||..::       ...
  Rat  2017 -----NGLLKNIRDSLNDYEAKLQDLRSVLQEAAAQGKQATGLNHENEGVLGAIQ-------RQM 2069

  Fly  2060 QELDELNQRISDHL---DPGYLEQGEGLLRL-TVQRQ-----IMLNGHLNQLDGYRILLNTTLGV 2115
            :|:|.|...:::||   |...|:....|.|: |.|::     ..|||...:|:            
  Rat  2070 KEMDSLKNDLTEHLATADASLLQTNSLLQRMDTSQKEYESLAAALNGARQELN------------ 2122

  Fly  2116 KTEQQREVRKH-----WLPKAEKHASHL--LARSNEYARKFQPTRNGARIAMLASSAHSNITEAI 2173
              :|.||:.:.     .:.:|||||..|  ||:..|..::........|.|:.|::|:.:|..||
  Rat  2123 --DQVRELSRSGGKAPLVAEAEKHAQSLQELAKQLEEIKRNTSGDELVRCAVDAATAYESILNAI 2185

  Fly  2174 NDARLAS------------ILAKERVYEAQRTLYPSDGSSMIERAKHSLHRSKQLQQE------A 2220
            ..|..|:            .:.||.:....:|| .||...::..||.:   .|:||||      :
  Rat  2186 RAAEDAAGKAASASESAFQTVIKEDLPRRAKTL-SSDSEELLNEAKMT---RKRLQQEINPALNS 2246

  Fly  2221 LKQMHKS-NVLKDKLHRQ----------------EQQVEGIKSTIYDSGLRTNNISGQ-LQGLSD 2267
            |:|..|: :|.||.|...                :..|.|.||.:    .:.|.|:.: |.|||.
  Rat  2247 LQQTLKTVSVQKDLLDANVTAVRNDLRGIQRGDIDSVVSGAKSMV----RKANGITSEVLDGLSP 2307

  Fly  2268 GSARRQAKDSLEMADRTGEQMRAELQKAKDMQKSIQNMRNSFSNLE---PDWEIKLGMAQENISL 2329
            ...     |...:.|..|.      .:.:|..|::.:..||...|.   ||..:|:.      |:
  Rat  2308 IQT-----DLGRIKDSYGS------TRHEDFNKALIDANNSVKKLTKKLPDLFVKIE------SI 2355

  Fly  2330 TQTNLRLANVSLSYLEQQAEKEQQVFEVWNNSMAQQLQQLRDQIAKARHAAEAIDVSLESLGPKC 2394
            .|..|.|.|:|                       ..:.::|:.|.:||.||..:.:.:...|...
  Rat  2356 NQQLLPLGNIS-----------------------DNVDRIRELIQQARDAANKVAIPMRFNGKSG 2397

  Fly  2395 IRSYLPASYGLSTSNKIRMSFALSNHLESSPL-----------IHLASSEGR--HITLELYKRRV 2446
            :...||     :....::...:||..|:...|           ::|.:.:..  :|.:.:...::
  Rat  2398 VEVRLP-----NDLEDLKGYTSLSLFLQRPDLRENGGTEDMFVMYLGNKDASKDYIGMAVVDGQL 2457

  Fly  2447 RLVWNLGGTTATVTHPMVVHTRDPKYDDAWYHVEANRTLNLGSLVVRRMNNY-GELT---PPNPV 2507
            ..|:|||...|.|....|: |.....:.....|:..|......|      || .|.|   |..|.
  Rat  2458 TCVYNLGDREAEVQIDQVL-TESESQEAVMDRVKFQRIYQFAKL------NYTKEATSNKPKAPA 2515

  Fly  2508 IIT---GSTDT------EHTRFYQSRSDRISLGGFASKDLQFTPGLNVVVHQ--VEVDN---KPL 2558
            :..   ||::|      |...||        :||: ..|.:....|....::  :|:|:   ..|
  Rat  2516 VYDLEGGSSNTLLNLDPEDAVFY--------VGGY-PPDFELPSRLRFPPYKGCIELDDLNENVL 2571

  Fly  2559 GLWNFVTSEGSCGGSMVGAKESSASSTARHFNGLGYAQLMKTRPRPTRKNLFSVQMTFRTLDENA 2623
            .|:||.|:.......:...:.....|...:|.|.|||:: .|:|.....|..   .|.:|..:..
  Rat  2572 SLYNFKTTFNLNTTEVEPCRRRKEESDKNYFEGTGYARI-PTQPNAPFPNFI---QTIQTTVDRG 2632

  Fly  2624 LLFLAVDDKNNRSVSVTLSRGRIMFRIDYGDESKLE------INTTKKYNV---------GQWIK 2673
            |||.|.:..|  .:|:.:..|.:|.|.....|...|      ||..|.:::         ..||.
  Rat  2633 LLFFAENQDN--FISLNIEDGNLMVRYKLNSEPPKEKGIRDTINDGKDHSILITIGKLQKRMWIN 2695

  Fly  2674 IEAAREFSAKRSTENGMLRVNNDRPISGAPTLPVNIHLLPDLSKTVYYLGGVPPGFTSGTSKAPG 2738
            :.       :||     :|:..:               :.|.|  .|||||:|.......:.:..
  Rat  2696 VN-------ERS-----VRIEGE---------------IFDFS--TYYLGGIPIAIRERFNISTP 2731

  Fly  2739 ADNPFLGCMKDVQVNGETYDPLESSSYYGVEPSCK---NMITKAGFSGNGY-----LELPSQSLR 2795
            |   |.||||:::   :|...:..:...||...|.   .::..|.||..|.     |::||..  
  Rat  2732 A---FQGCMKNLK---KTSGVVRLNDTVGVTKKCSEDWKLVRTASFSRGGQMSFTNLDVPSTD-- 2788

  Fly  2796 KRSNTALVFRTLQPDCLLLLAAYPPEILGDYDAKDIKGNFSISLVDGQLHVWVNSGRSFIKMSSN 2860
             |...:..|:|.||...||            :.:....:..::|.||  |:.:::..|.|.:..:
  Rat  2789 -RFQLSFGFQTFQPSGTLL------------NHQTRTSSLLVTLEDG--HIELSTRDSNIPIFKS 2838

  Fly  2861 SSQMNDGEFHVVHLIKTGRKLELMVDDELQEIRNLNGNPTVVSLPRDAGGLYIGGAPPHESYTPL 2925
            .....||..|.|.:|.....|.|::||::     |..|..:.|.......|.:||.         
  Rat  2839 PGTYMDGLLHHVSVISDTSGLRLLIDDQV-----LRRNQRLPSFSNAQQSLRLGGG--------- 2889

  Fly  2926 APTFVNLEGAIRDVVFNNRTINFNDALTFANVQIGRNGPLMG-SL----------------KGGL 2973
                 :.||.|.:|:. .|.....:.|..|:....::..|.| ||                ||.:
  Rat  2890 -----HFEGCISNVLV-QRFSQSPEVLDLASKSTKKDASLGGCSLNKPPFLMLFKSPKRFNKGRI 2948

  Fly  2974 YDV--LLKTEPMIGKSFTASPEG--CKRIGSYSYEPNAFKFGDDIYSYSQLKLPERHFWQRNFHL 3034
            ::|  |::..|...:|..|..:|  |....:......|.:|||...|:...|||:.....|: ..
  Rat  2949 FNVNQLMQDAPQATRSTEAWQDGRSCLPPLNTKASHRALQFGDSPTSHLLFKLPQELLKPRS-QF 3012

  Fly  3035 SFDFRSFYPNGMLYLSPGSKEKPKHYVALVLKDGQLVLVV-RGRRREELQLTAKLNDGEWHRVTI 3098
            |.|.::..|.|:::.: |:|:.   ::||.:.||::|..: .|.::..|:...:.:||:||.|..
  Rat  3013 SLDIQTTSPKGLVFYT-GTKDS---FLALYVADGRVVFALGAGGKKLRLRSKERYHDGKWHTVVF 3073

  Fly  3099 SCHDRKVTMSVEIGRTDQKTSAQMKLPKKIGASQLLLVGGLP-QSPVKVSSDLYVRL-------- 3154
            ..:..|..:.|:..|..:                    |.|| .|.:.....:|:.|        
  Rat  3074 GLNGGKARLVVDGLRAQE--------------------GSLPGNSTISPREQVYLGLPLSRKPKS 3118

  Fly  3155 ---EPFKGCLRRVSINNNTQDLARPGKHSNVGQCF-PTVERGSYF-PGDAYAIYKKNFNVGKYLD 3214
               ..|.||||...:|:...|  .|.....|..|. .::|:|.|| .|..:.|...:.::|..|.
  Rat  3119 LPQHSFVGCLRDFQLNSKPLD--SPSARFGVSPCLGGSLEKGIYFSQGGGHVILANSVSLGPELK 3181

  Fly  3215 LETEFRTSELSGILLSVSDPNGFPALSLELHNGNIIFSCDPGNGAPMRVESSLPTKYALCDNKWH 3279
            |....|...|:|:|:.|...:| ..||:.:..|.:..|.....|..:   :|:..|.:|||.:||
  Rat  3182 LTFSIRPRSLTGVLIHVGSQSG-QRLSVYMEAGKVTTSVSSDAGGSV---TSITPKQSLCDGQWH 3242

  Fly  3280 NISALYDGEQIVLRI----DQLPAVISVGNQGNAGKVQTRSPLYIGGLPESAPSGSLISRENFKG 3340
            :::...  :|.:|.:    |....|..:....|:    ||..|::||:|:.....:|....:|.|
  Rat  3243 SVAVSI--KQRILHLELDTDSSYTVAPLSFSPNS----TRGSLHVGGVPDKLKMLTLPVWNSFFG 3301

  Fly  3341 CIRHVSIRN 3349
            |::::.:.:
  Rat  3302 CLKNIQVNH 3310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wbNP_723870.1 Laminin_N 164..396 CDD:278484 86/260 (33%)
EGF_Lam 401..450 CDD:238012 22/55 (40%)
TNFRSF <407..507 CDD:304602 42/122 (34%)
EGF_Lam 505..552 CDD:238012 23/113 (20%)
Laminin_EGF 550..597 CDD:278482 24/91 (26%)
Laminin_B 660..798 CDD:278481 33/175 (19%)
EGF_Lam 851..900 CDD:238012 16/100 (16%)
Laminin_EGF <943..971 CDD:278482 5/33 (15%)
VSP 953..1414 CDD:146106 124/510 (24%)
Laminin_EGF 974..1018 CDD:278482 6/45 (13%)
EGF_Lam 1017..1065 CDD:238012 8/47 (17%)
Laminin_EGF 1065..>1105 CDD:278482 13/66 (20%)
EGF_Lam 1150..1197 CDD:238012 8/48 (17%)
Laminin_EGF 1199..1247 CDD:278482 18/47 (38%)
EGF_Lam 1247..1292 CDD:238012 11/44 (25%)
Laminin_EGF 1294..1342 CDD:278482 18/50 (36%)
Laminin_EGF 1340..1392 CDD:278482 16/51 (31%)
Laminin_B 1486..1611 CDD:278481 36/127 (28%)
EGF_Lam 1669..1716 CDD:238012 24/47 (51%)
Laminin_EGF 1718..1767 CDD:278482 30/48 (63%)
EGF_Lam 1772..1819 CDD:238012 14/46 (30%)
CrfC <1933..2267 CDD:223771 92/423 (22%)
Laminin_II 2277..2400 CDD:283628 23/125 (18%)
LamG 2399..>2492 CDD:304605 19/105 (18%)
Laminin_G_2 2616..2755 CDD:280389 34/153 (22%)
Laminin_G_2 2804..2944 CDD:280389 31/139 (22%)
Laminin_G_2 3038..3169 CDD:280389 31/143 (22%)
LamG 3192..3347 CDD:238058 41/159 (26%)
Lama3NP_001380677.1 LamNT 42..293 CDD:214532 92/274 (34%)
EGF_Lam 294..340 CDD:238012 22/47 (47%)
EGF_Lam 351..419 CDD:238012 21/67 (31%)
EGF_Lam 421..461 CDD:238012 19/40 (48%)
Laminin_EGF 487..534 CDD:395007 4/46 (9%)
EGF_Lam 531..573 CDD:238012 4/41 (10%)
Laminin_EGF 627..677 CDD:395007 12/91 (13%)
EGF_Lam 680..723 CDD:238012 6/42 (14%)
Laminin_EGF 1265..1313 CDD:395007 20/52 (38%)
EGF_Lam 1310..1353 CDD:238012 10/42 (24%)
EGF_Lam 1355..1400 CDD:238012 14/44 (32%)
EGF_Lam 1403..1453 CDD:238012 17/53 (32%)
Laminin_B 1517..1651 CDD:395006 38/141 (27%)
EGF_Lam 1685..1731 CDD:238012 24/47 (51%)
EGF_Lam 1733..1784 CDD:238012 30/52 (58%)
Laminin_I 1846..2103 CDD:310534 54/292 (18%)
SMC_prok_B 2031..>2387 CDD:274008 96/424 (23%)
Laminin_II 2287..2415 CDD:368703 34/176 (19%)
LamG 2434..2569 CDD:214598 31/150 (21%)
LamG 2601..2741 CDD:238058 43/177 (24%)
LamG 2768..2900 CDD:238058 39/167 (23%)
LamG 2992..3134 CDD:238058 37/166 (22%)
LamG 3158..3309 CDD:238058 41/160 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9135
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100395
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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