DRSC/TRiP Functional Genomics Resources

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Protein Alignment wb and Ush2a

DIOPT Version :10

Sequence 1:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster
Sequence 2:NP_001289148.1 Gene:Ush2a / 289369 RGDID:628777 Length:5191 Species:Rattus norvegicus


Alignment Length:3879 Identity:739/3879 - (19%)
Similarity:1193/3879 - (30%) Gaps:1505/3879 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LQQNIVSWTGARIASSPDKKKKSPQSSRRHKTKSGLIIESNIADSESMLAIASSESVTKKKPPQR 118
            ||..|...|..||.    .||....|.:.|:|:....::....:|.:.......:|:|...|   
  Rat   190 LQPPIKVMTPGRIL----MKKWIHLSVQVHETEVSFFVDGLEENSTAFDTRTLRDSITDSAP--- 247

  Fly   119 RRNGKLQKSGGGAGGGALRLLKTED--VYSSS---------FSGGLYPPLFNVV---------PR 163
                .....|....|..|.:.:.:|  :|:.|         |||.|  |..::.         ||
  Rat   248 ----STVLIGQSLNGSELFVGRMQDFRLYNVSLTNREILELFSGDL--PHLHIQSHCRCPGSHPR 306

  Fly   164 AQISVNATCGQNGAEEYCKQVGAKPCGICNAHSSDRAKQRSIQ-SLISSGSGSGSGSGFEEGWWQ 227
            ...||...|..||.|:..:            |...|....:.. |.|:....:.|        |.
  Rat   307 VHPSVQQYCIPNGVEDTLQ------------HRVSRLNPEAHPLSFINDDDVATS--------WI 351

  Fly   228 SPTLQGGRQF-EYVTILLDLKQ-TFQIFSVWLKSANSPRP-ASWILEKSLDGINFEPWQYFGLSD 289
            |.......|. :.|.|.:||:. .:|:|.:.:: .:||:| |..|..|..|...:|.||||.   
  Rat   352 SHVFTDITQLNQGVAISIDLENGQYQVFQITIR-FSSPQPVAMRIQRKKADKSLWEDWQYFA--- 412

  Fly   290 ADCQRRWNLSGQNGKYVFQNDTEIICSTQFSKPGPLENGVLHASLL----KNRPGATD--QSPEL 348
                |..::.|.......:|...:.| .||....|..:|.:...||    |:|||..|  .|..|
  Rat   413 ----RNCSVWGMKNNGDLENPNSVNC-LQFPDFIPFSHGNVTFDLLTSGQKHRPGDYDFYNSSLL 472

  Fly   349 MKFITTRYIRIRLQGMHSTANQDNSLDW-LLDSPSLEKHSFYSLSQLKVSARLDCNGHANRSHES 412
            .:|:|...||:..:|:...|       | .:||    :|.:|::.::.:..|..|:|||.....:
  Rat   473 QEFMTATQIRLYFRGLFYPA-------WHTVDS----RHRYYAVDEITIIGRCQCHGHAETCDRT 526

  Fly   413 --PDDPLMQCICQ-HN-TCGAQCEQCCPLFQDRPYQMGGE-----CEICQCYGHAESCTYDPFLD 468
              |    .||:|. |: |.|.||.:|.||:.|:|::.|.:     |:.|||:|||.||.||..:|
  Rat   527 RRP----YQCLCSPHSFTEGPQCGRCSPLYNDKPFRSGNKVHAFNCKPCQCHGHASSCHYDASMD 587

  Fly   469 K----------GICQSCSNNTAGIECEFCEMGFYRELDAPLTDPCLPCSCNPARSTGGCQSDGGS 523
            .          |:|..|.::|.|..||.|:..|||.:.|...||                     
  Rat   588 PFPLEYNRGGGGVCDDCQHHTTGRNCESCQDYFYRPIGADPADP--------------------- 631

  Fly   524 CNCLEGFQGKNCEECAPGYYGDDCKRCECDERGSLGSTGSC---SGVCQCKLNVEGSTCSECAPG 585
                                 :.||.|:|:..|:...:..|   .|.|.||..|.|..|..|..|
  Rat   632 ---------------------EVCKHCDCNRDGTRNGSLLCDLVGGQCDCKRRVSGRRCFRCHIG 675

  Fly   586 YFDLSAENAEGCTSCWCSGVSQTCHSAKLQTLAFETLNDWKITDIQRVKPISIPVDAETNRLIFA 650
            ::.|.|.:.:||..|.|:                                               
  Rat   676 FYGLQALDPDGCRPCDCN----------------------------------------------- 693

  Fly   651 NELDEVEAIYWQASLGYLGNRLTSYGSRLQLVLSWDVIRGDRSGKPTTGPNVILVGKNGLKIAFG 715
                                                                             
  Rat   694 ----------------------------------------------------------------- 693

  Fly   716 DESLDGLGINLNVTLTEVGWYHVPPTVVDIKTRLRRTEGGDYHGESVTRSQFLSVLVSLDAVLIR 780
                                   |...||          ||                        
  Rat   694 -----------------------PSGTVD----------GD------------------------ 701

  Fly   781 AAFHTDQGETSLERAVIYSGGVELGGKSSSQVEQCLCPAGYTGLSCEGCAFGFKRIYENTSDHQI 845
            ...|.:.|                         ||.|.|...||.|:.|:||||.:....:|   
  Rat   702 ITCHHNSG-------------------------QCSCKANVIGLRCDRCSFGFKFLRSLNAD--- 738

  Fly   846 LSKCIPCPCNGHSNSCDLQSGNCGDCMHNTFGDRCERCQLGYYGNPLQGTPNDCKRCACPLSEDS 910
              .|.||.||.|                                                     
  Rat   739 --GCEPCHCNLH----------------------------------------------------- 748

  Fly   911 NNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDDGYFGNPRQPGSSCQRCD 975
                                                                     ||..|.||
  Rat   749 ---------------------------------------------------------GSVNQLCD 756

  Fly   976 CAGGPCNVTTGECITCRGNTEGWHCERCKLGYWGDPAVGCDPCHCHTEGSESG-LCDSTDGQCLC 1039
            ...|.|        .|:...:|..|:.|:..::|.|...|:.|.|:..|:::| :||:..|||:|
  Rat   757 PLSGQC--------VCKKEAKGLRCDVCRENFYGLPWSACEVCDCNRAGTQAGTVCDAETGQCVC 813

  Fly  1040 KPRYAGQKCDECDVGYANVELR----CPSCNCDPL----GSLVQDRCDPHTGQCHCKEGVMGAKC 1096
            ||...|::|.||..||.|:...    |..|||:..    |||:   ||..||||.||.||.|.:|
  Rat   814 KPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLL---CDKSTGQCPCKLGVTGLRC 875

  Fly  1097 HECQDGYFGMNAVAYRMDDLAALRQNSDSDDDEWELVPDTEDPNSESTVACEECHCSSVGSL-SS 1160
            |:|:...|.:.     :|:|.                            .|:.|.|.|:|:| .|
  Rat   876 HQCEPHRFNLT-----VDNLQ----------------------------GCQACECDSLGTLPGS 907

  Fly  1161 DCDKRTGQCACLANVTGRRCDKCRPGHW----NLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCK 1221
            .||..:|||.||.:..||||::|:||.:    |.|   ||..|.|...|:..|.||..||||.|:
  Rat   908 TCDPVSGQCLCLPHRQGRRCERCQPGFYSSPGNAT---GCLPCSCHTAGAVSHICNSVTGQCSCR 969

  Fly  1222 -IGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQVCDPHNGRCICPKFTRGLGCGQCVPGTWGW 1285
             ....||.|::|.:.:|||                  ||..||                      
  Rat   970 DPSTTGQSCHQCQDHYFGF------------------DPRTGR---------------------- 994

  Fly  1286 QARLGCRECECDHIGSIGQQCSTGDGQCQCREGYSGRKCDTCAIGYFGYPECRRCGCDAEGSFTQ 1350
                                                               |:.|.|..||:..:
  Rat   995 ---------------------------------------------------CQPCHCHLEGALNE 1008

  Fly  1351 ADGSIACD-SNGQCPCKSLVVGLKCDTCMQSTFGLSAQNPEGCTRCFCFGRSGECEQSDLSWGHI 1414
                 .|| ..|||.||..|.|.|||.|:.....|...|..||::        ...|.....|.:
  Rat  1009 -----TCDVVTGQCFCKEFVTGSKCDICVPGASHLDVNNLFGCSK--------TPSQQPPPRGRV 1060

  Fly  1415 RMAESRNLSVQQIRPHSVPSSDY-EYIVVVQMEGSSFHREDAEI-----------QRMNDLSLVP 1467
            :.:.:.|||..   |...|::.: .|         :..|:|:||           |...|.||.|
  Rat  1061 QSSSAINLSWS---PPDFPNAHWLTY---------TLFRDDSEIYTTDDQHPYYTQYFLDTSLSP 1113

  Fly  1468 KS-------TGNV-----SIGAYGQFYHPLYFQLPPQFYGDRTSSYGGFLYFTLITEGA------ 1514
            .:       |.||     ||               |..|..:.....|.|..|.|...|      
  Rat  1114 HTAYSYYIETSNVHSSTRSI---------------PVIYKTKPEGSEGHLNLTHIIPVASDSITL 1163

  Fly  1515 -------HK-PLERNILGQYPLVQLHAHSKLLLDFYEYEEFEYSLNVTHRVPLHE---------- 1561
                   |. |:|:.:|...|:    .|::..:   .||..|.|..:.:.||..:          
  Rat  1164 VWTGLSNHSGPIEKYVLSCTPV----DHTEPCV---SYEGPETSATIRNLVPFTQYCFSVQGCTN 1221

  Fly  1562 ------------------------SFWKYHHT------SQAVDRNTLMAALQNIRH-IFIRAFAF 1595
                                    :.||...|      |:.||.|.::     ||: ::::.:..
  Rat  1222 GSCLYSSPITVTTAQAPPQRQEPPTVWKISPTELKVEWSRPVDSNGVI-----IRYELYMKRWPS 1281

  Fly  1596 ADFQEVVLQN---VHM-DAAIYIKGSTNLIAKGVERCKCPKRFDGLSCQDPGRSFYRWRNTTI-- 1654
            .: :.:|.::   .|. .|:.....|.|::       :.|:....||..|| .:.|.:|...:  
  Rat  1282 TE-ESLVFESHGWFHSHPASPSANQSENVL-------QDPQVSTVLSGLDP-HTEYAFRVLAVNM 1337

  Fly  1655 ---VESVFIEDLIGRAAPCHCNGRSSDCDRETGVCQNCRGNTGGDHCHQCAEGFYGDPNSPHGCQ 1716
               |.|.:..:..|.:||......|.                              .|.||:.. 
  Rat  1338 AGSVSSAWASERTGESAPVFMAAPSV------------------------------SPLSPYSL- 1371

  Fly  1717 ACPCPETNRNFARGCNVWDGEVSCVCKPGY-TGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGI 1780
            :....:...||.|      ||:.     || ...:.||       .|.|.....|... .|....
  Rat  1372 SVSWEKPAENFTR------GEII-----GYKISMVSER-------SPQRDVPVMCSKL-VHFAES 1417

  Fly  1781 QTEGCDVETGRCYCREGVTGLKCDKCQAERHHLVDNGCKICDNCTLLLLDYMELVG--NKLRRGM 1843
            |.:...|:..:.|.....|...|          ...||     .|..|.:...|..  .:||..|
  Rat  1418 QDQSYIVQRLKPYRTYSFTVSLC----------YSVGC-----VTSALGEGQTLAAAPAQLRSPM 1467

  Fly  1844 HNMDLTGI-----------------PAPYRKLSEYES------------------AYEKW-NGRH 1872
                :||:                 |.|..:|...||                  .|.:: ...|
  Rat  1468 ----VTGVTSTTVHIRWLPPAEVNGPPPLYRLERRESFLPAATAARTKGTRFMGDGYCRFPRTAH 1528

  Fly  1873 WDFSQTKRRLQDYDSADILKLEAHAEN------LKFQSRKAVATIGKREFAIKSMREDAVTQQHS 1931
            .||...|..........::.|..|.:|      |:.:|.:.......:...::....|..:||:|
  Rat  1529 PDFIGIKASFWTRVPEGLILLALHPDNQEEYFALQLKSGRPYFLYNPQGSLVEVTTADDHSQQYS 1593

  Fly  1932 VG----------------LLRSEILQTLSDLHGYGKSAHYLSL-PTALKQARFYLQAIREHDQMV 1979
            .|                .|..:...:.:.|:|...:..|..| ...|.|....||   :..::|
  Rat  1594 DGQWHEITAIRHQSFGQITLDEQYTDSSASLNGSSVTGGYTRLFVGGLPQGHTILQ---KRPEIV 1655

  Fly  1980 QGIRSTNDCAWKHFYAMGNASDASFDESGRLEMLWRDLN-QTNHRVVDMRLQVDRVQEVENEAED 2043
            :          :.|  :|...|.|..:.......|..|: |::..      ||:.....|....|
  Rat  1656 R----------RGF--VGCLKDVSILKGSSPSGTWLPLDWQSSEE------QVNVHHSWEGCPTD 1702

  Fly  2044 VLEHVRNLSIRVGESHQELDELNQRISDHLDPGYLEQGEGLLRLTVQRQIMLNGHLNQLDGYRIL 2108
            :.|.|:                      .|..|:||............:|.|....:||:|..:.
  Rat  1703 LEEGVQ----------------------FLGAGFLELRSDTFHAAKDFEISLKFQTDQLNGLLLF 1745

  Fly  2109 LNTTLGVKTEQQREVRKHWLPKAEKHASHLLARSNEYARKFQPTRNGARIAM-----LASSAHSN 2168
            ::.|.|:......  .|..|...:.::|.:|.|......:........|:.:     :.|...:.
  Rat  1746 IHNTEGLDFLAME--LKSGLLSFQLNSSRILTRVEVRLGRTHCDGKWNRVTIRREGSMVSVGVNE 1808

  Fly  2169 ITEAINDARLASILAKERVY------EAQ---RTLYPSDG------------SSMIERAKHSLHR 2212
            :|::.:.|.....|....||      |.|   |.|....|            .:::..|..| .|
  Rat  1809 LTKSTSRAGDQPPLLTSPVYLGGIPQELQASYRHLTLEQGFRGCVKEVAFTRGAVVNLASVS-SR 1872

  Fly  2213 SKQLQQEALKQMHKS-------NVLKDKLHRQEQQVEGIKSTIYDSGLR----------TNNISG 2260
            :.::.|:.......:       ::|   ::|      |.:.::|:|||:          .::..|
  Rat  1873 AVRVNQDGCLSSDSTVNCGGNDSIL---VYR------GSRQSVYESGLQPFTEYLYRVTASHKGG 1928

  Fly  2261 QL-----QGLSDGSA--------RRQAKD--SLEMADRTGEQMRAELQK------AKD-MQKSIQ 2303
            .:     :|.:.|||        |.|:.:  |:|:|......::..|:|      ::| .|..:.
  Rat  1929 SVSSDWSRGRTLGSAPHSVPTPSRAQSINGYSVEVAWNEPAMVKGVLEKYILKAYSEDSAQPHMP 1993

  Fly  2304 NMRNSFSNLEPDWEIKLGMAQ-ENISLTQTNLRLAN-------VSLSYLEQQAEKEQQ--VFEVW 2358
            :....|:|.:....|..|:.. .:.::|.|....|.       :|:| ..|:|.:|.|  |.|..
  Rat  1994 SASTEFNNTDIRTGILTGLHPFHSYAVTLTACSRAGCTESSRALSIS-TPQEAPQEVQAPVAEAL 2057

  Fly  2359 NNSMA------QQLQQLRDQIA-----------KARH-------AAEAIDVSLESLGPKCIRSYL 2399
            .||::      :|...:..|.:           |.::       ...|.::::.:    |.|:  
  Rat  2058 PNSLSFFWSPPRQANGIITQYSLYMDGRLVYTGKGQNYTVTDLRVFTAYEITVGA----CTRA-- 2116

  Fly  2400 PASYGLSTSNKIRMSFA-LSNHLESSPLIHLASSEGRHITLELYKRRVRLVWNLGGTTATVTHPM 2463
                |.:.|:::.:..| |.......|::.:..|           |.|.:.|........:....
  Rat  2117 ----GCTNSSRVILHTAQLPPERVDPPVLAILDS-----------RTVHIQWKQPRQLNGILERY 2166

  Fly  2464 VVHTRDPKYDDAWYHVEANRTLNL----------GSLVVRRMN---------------------- 2496
            :::|.:|.::...:.|..|.|.||          |.|.:.::.                      
  Rat  2167 ILYTLNPTHNSTVWDVVYNSTENLQTHLLYHLSPGCLYLIKLGACTGGGCTTSEPSQALMDETVP 2231

  Fly  2497 ------------------NYGELTPPNPVIITGSTDTEHTRFYQSRSDRISLGGFASKDLQFTPG 2543
                              ::.|...||.||.|.....:.|..:  .|..:|...:.     |.||
  Rat  2232 EGVPAPRAHSHSPDSFNISWTEPGHPNGVITTYELYLDGTLIH--NSSELSCHAYG-----FDPG 2289

  Fly  2544 LNVVVHQVEVDNKPLGLWNFVTSEGSCGGSMVGAK--ESSASSTARHFNGLGYAQLMKTRPRPTR 2606
               .:|..:|        ...|::|...|.:|..:  |:....|...|          .:|..:|
  Rat  2290 ---SLHTFQV--------QACTAKGCALGPLVENRTLEAPPEGTVNLF----------VKPEGSR 2333

  Fly  2607 KNLFSVQMTFRTLDENALLFLAVDDKNNRSVSVTLSRGRIMFRIDYGDESKLEINTTKKYNVGQ- 2670
                          |.|:.:.|....|.|.....|..|.  |..|...::...:::||..:..: 
  Rat  2334 --------------EAAVRWDAPPHPNGRLTYSVLITGN--FYADQAGDNYTLLSSTKTVHSSKG 2382

  Fly  2671 ---WIKIE---AAREFSAKRSTENGMLRVNNDRPISGAPTLPVNIHLLPDLSKTVYYLGGVPPGF 2729
               |:.::   ....::.:.:..|....|.:||         |::.:.|          |.|.|.
  Rat  2383 DRLWVLVDRLVPCSNYTVQVNASNSQGSVLSDR---------VSVEMPP----------GAPDGL 2428

  Fly  2730 ------------------TSGTSKAPGADNPFLGCMKDVQVNG--ETYDPLESS--SY--YGVEP 2770
                              |...:.|||:....|....|....|  |.: |:.|:  ||  .|::|
  Rat  2429 LSPRLAAATPTSLQVVWSTPARNNAPGSPRYQLQMRPDPSTRGLLELF-PIPSALLSYEVTGLQP 2492

  Fly  2771 SCK---NMITKAGFSGNGYLELPSQSLRKRSNTALVFRTLQPDCLLLLAAYPPEILGDYDA---- 2828
            ...   .::...|| |:.|.:.          |.|:....:|              |..||    
  Rat  2493 FTVYEFRLVATNGF-GSAYSDW----------TPLMTTEDKP--------------GPMDAPVLN 2532

  Fly  2829 -----------KDIKGNFSISLVDGQLHVWVNSGRSFIKMSSNSSQMNDGEFHVVHL-IKTGRKL 2881
                       |..:.|.:|:..:...|     ||.::.:|...:...     |||| ..|..:.
  Rat  2533 VKAGMMSVAWRKPTECNGAITHYNIYQH-----GRLYLTVSGGVTNCT-----VVHLRPHTAYQF 2587

  Fly  2882 ELMVDDELQEIRNLNGNP---TVVSLPRDAGGLYIGGAPPHESYTPLAPTFV--------NLEGA 2935
            ::    |....:..:.:|   ||.:||....|:      |.....|..||.:        :|:|.
  Rat  2588 QI----EACSSKGCSMSPASETVWTLPGTPEGI------PGPELLPYTPTKIIVSWQPPTHLDGL 2642

  Fly  2936 IRDVVFNNRT-----------INFNDALTFANVQIGRNGP-----------LMGS-LKGGLYD-- 2975
            :.::....|.           :..:.|:.|.:     |.|           ::|| |.||...  
  Rat  2643 VENITIERRVKEQEEVRSLVILPRSQAVRFID-----NDPALRPWTHYEYRVLGSTLNGGTNSSA 2702

  Fly  2976 -VLLKTEPMIGKSFTASPEGCKRIGSYSYEPNAFKF--------GDDIYSYSQLKLPERHFWQRN 3031
             |.:.|.|       :.|.|.:....:...|:|.:.        ..||.|| ::::|:......|
  Rat  2703 WVEVTTRP-------SRPSGVQPPTVHVLGPDAVEVTWKAPLIRNGDIVSY-EIRMPDPLIEITN 2759

  Fly  3032 ---FHLSFDFRSFYP------------NGMLYLSPGSKEKPKH---YVALVLKDGQLVLVVRGRR 3078
               |.||...:...|            .|..||...::..|..   :.||..:...|.:.:.|:.
  Rat  2760 VTSFVLSHLVKHLIPFTNYSVSIVACSGGHGYLGGCTESLPTFATTHPALPQELTPLSISLLGQS 2824

  Fly  3079 ----------------------REELQLTAKLNDGE----WHRV--------------TISCHDR 3103
                                  |.::|.....|..|    ||.:              ..:.::.
  Rat  2825 YVGISWQPPSKPNGPNLRYELLRRKIQQPLASNPPEDLNLWHNIYSGTRRFYEDKGLSRFTTYEY 2889

  Fly  3104 KVTMSVEIGRTDQKTSAQMKLPKKIGASQLLLVGGLPQSPVKVSSDLYVRLEPFKGCLRRVSINN 3168
            |:.:...:|.|                         |...|.|::   :...|.:|.....||.|
  Rat  2890 KLFVHNSLGFT-------------------------PSQEVTVTT---LAGSPERGATVTASILN 2926

  Fly  3169 NT-----------QDLA----------RPGKHSNVGQCFPTVE---RGSYFPGDAYAIYKKNFNV 3209
            :|           |||.          ..|......:.||.|:   .|...|...|.::...|| 
  Rat  2927 HTAIDVRWKRPTFQDLQGDVEYYTLFWSSGTSVESLKIFPDVDFHVIGHLAPNVEYQVFLLVFN- 2990

  Fly  3210 GKYLDLETEFRTSELSGILLSVSDPNGFPALSLELHNG---NIIFSCDPGNGAPMRVESSLPTKY 3271
            |.:....|..|.:...      .:|.|.....:.:.|.   .:|:: .|.|...:..|||:   |
  Rat  2991 GVHAINSTVVRVTTWE------EEPRGMRPPEVVIINSTAVRVIWT-SPSNPNAVITESSV---Y 3045

  Fly  3272 ALCDNKWHNISA---------------LYDGEQIVLRIDQLPAVISVGNQGNAGKVQTRSPLYIG 3321
            |  :|:.|...|               :||.:..|...|  ..|.|.|.|     |.|       
  Rat  3046 A--NNELHKAGAGAPGSFTLEDLSPFTIYDIQVEVCTKD--ACVKSSGTQ-----VST------- 3094

  Fly  3322 GLPESAPSGSLISRENFKGCIRHVSIRNERRDWIEMEDLRNVLL 3365
              .|..|||..|.      .||.::.|:.:.||....:...::|
  Rat  3095 --AEDTPSGISIP------IIRDITSRSLQIDWTAPGNPNGIIL 3130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wbNP_723870.1 Laminin_N 153..398 CDD:459653 64/264 (24%)
EGF_Lam 401..450 CDD:238012 19/57 (33%)
EGF_Lam 505..552 CDD:238012 3/46 (7%)
Laminin_EGF 550..597 CDD:395007 15/49 (31%)
Laminin_B 660..813 CDD:459652 7/152 (5%)
EGF_Lam 851..900 CDD:238012 5/48 (10%)
Laminin_EGF <943..971 CDD:395007 2/27 (7%)
Laminin_EGF 974..1018 CDD:395007 11/43 (26%)
EGF_Lam 1017..1065 CDD:238012 20/52 (38%)
Laminin_EGF 1065..>1105 CDD:395007 20/43 (47%)
EGF_Lam 1150..1197 CDD:238012 23/51 (45%)
Laminin_EGF 1199..1247 CDD:395007 18/48 (38%)
EGF_Lam 1247..1292 CDD:238012 4/44 (9%)
Laminin_EGF 1294..1342 CDD:395007 2/47 (4%)
Laminin_EGF 1340..1392 CDD:395007 19/52 (37%)
Laminin_B 1486..1626 CDD:459652 33/198 (17%)
EGF_Lam 1669..1716 CDD:238012 5/46 (11%)
Laminin_EGF 1718..1767 CDD:395007 11/49 (22%)
EGF_Lam 1772..1819 CDD:238012 7/46 (15%)
YhaN <1907..2141 CDD:443752 43/251 (17%)
SMC_prok_B <2123..>2390 CDD:274008 63/365 (17%)
Laminin_II 2279..2400 CDD:368703 29/161 (18%)
LamG 2399..>2492 CDD:473984 18/103 (17%)
LamG 2586..2753 CDD:238058 30/191 (16%)
Laminin_G_2 2804..2944 CDD:460494 29/166 (17%)
LamG 3018..3167 CDD:238058 29/206 (14%)
LamG 3192..3347 CDD:238058 39/172 (23%)
Ush2aNP_001289148.1 LamGL 144..279 CDD:214722 21/99 (21%)
Laminin_N 312..512 CDD:470680 58/239 (24%)
Laminin_EGF 514..561 CDD:395007 18/50 (36%)
EGF_Lam 570..635 CDD:238012 25/106 (24%)
EGF_Lam 637..688 CDD:238012 16/50 (32%)
Laminin_EGF 690..740 CDD:395007 22/248 (9%)
EGF_Lam 742..787 CDD:238012 18/162 (11%)
Laminin_EGF 791..840 CDD:395007 19/48 (40%)
Laminin_EGF 843..893 CDD:395007 23/85 (27%)
EGF_Lam 895..944 CDD:238012 22/51 (43%)
EGF_Lam 946..996 CDD:238012 22/140 (16%)
EGF_Lam 997..>1034 CDD:238012 17/41 (41%)
FN3 1054..1127 CDD:473895 18/84 (21%)
FN3 1152..1234 CDD:238020 14/88 (16%)
FN3 1238..1350 CDD:238020 23/125 (18%)
FN3 1361..1444 CDD:214495 22/142 (15%)
LamG 1512..1668 CDD:238058 28/170 (16%)
LamG 1706..1856 CDD:238058 29/173 (17%)
FN3 1802..>2117 CDD:442628 59/335 (18%)
FN3 2133..2223 CDD:238020 14/100 (14%)
FN3 2227..2749 CDD:442628 114/643 (18%)
FN3 <2674..3048 CDD:442628 76/427 (18%)
FN3 <3453..3756 CDD:442628
FN3 3762..3852 CDD:238020
FN3 <3876..4330 CDD:442628
FN3 <4186..>4558 CDD:442628
FN3 <4486..>4755 CDD:442628
fn3 4724..4798 CDD:394996
FN3 4815..4916 CDD:238020
Blue background indicates that the domain is not in the aligned region.

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