Sequence 1: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_775384.1 | Gene: | lamc1 / 286832 | ZFINID: | ZDB-GENE-021226-3 | Length: | 1593 | Species: | Danio rerio |
Alignment Length: | 1236 | Identity: | 361/1236 - (29%) |
---|---|---|---|
Similarity: | 523/1236 - (42%) | Gaps: | 306/1236 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 155 PPLFNVVPRAQISVNATCGQNGAEEYCKQVG----AKPCGICNAHSSDRAKQRSIQSLISSGSGS 215
Fly 216 GSGSGFEEGWWQSPTLQGGRQF-EYVTILLDLKQTFQIFSVWLKSANSPRPASWILEK--SLDGI 277
Fly 278 NFEPWQYFGLSDADCQRRWNLSGQNGKYVFQNDTEIICSTQFSKPGPLENGVLHASLLKNRPGA- 341
Fly 342 -TDQSPELMKFITTRYIRIRLQGMHSTANQDNSL-DWLLDSPSLEKHSFYSLSQLKVSARLDCNG 404
Fly 405 HANRSHESPDDPLMQCICQHNTCGAQCEQCCPLFQDRPYQMG-----GECEICQCYGHAESCTYD 464
Fly 465 PFLDK-----GICQSCSNNTAGIECEFCEMGFYRELDAPLTDPCLPCSCNPARSTGGCQSDGGSC 524
Fly 525 NCLEGFQGKNCEECAPGYYG---DDCKRCECDERGSLGSTGSCSGVCQCKLNVEGSTCSECAPGY 586
Fly 587 FDLSAENAEGCTSCWCSGVSQTCHSA------KLQTLAFETLND-WKITDIQRVKPISIPVDAET 644
Fly 645 NRLIFANELDEVEAIYWQASLGYLGNRLTSYGSRLQLVLSWDVIRGDRSGKPTTGPNVILVGKNG 709
Fly 710 LKIAFGDESLDGLGINLNVTLTEVGWYHVPPTVVDIKTRLRRTEGGDYHGE-SVTRSQFLSVLVS 773
Fly 774 LDAVLIRAAFHTDQGETSLERAVIYSGGVEL------GGKSSSQVEQCLCPAGYTGLSCEGCAFG 832
Fly 833 FKRIYENTSDHQILSKCIPCPCNGHSNSCDLQSGNCGDCMHNTFGDRCERCQLGYYGNPLQGTPN 897
Fly 898 DCKRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDDGYFG 962
Fly 963 NP---RQPGSSCQRCDC-------AGGPCNVTTGECITCRGNTEGWHCERCKLGYWGDPAVGCDP 1017
Fly 1018 CHCHTEGSESGLCDSTDGQCLCKPRYAGQKCDECDVGYANVELRCPSCNCDPLGSLVQDRCDPHT 1082
Fly 1083 GQCHCKEGVMGAKCHECQDGYFGMNAVAYRMDDLAALRQNSDSDDDEWELVPDTEDPNSESTVAC 1147
Fly 1148 EECHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECN 1212
Fly 1213 PWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQVCDPHNGRCICPKFTRGLGCGQ 1277
Fly 1278 CVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQCQCREGYSGRKCDTCAIGYF---GYPECRR 1339
Fly 1340 C 1340 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | 68/241 (28%) |
EGF_Lam | 401..450 | CDD:238012 | 20/53 (38%) | ||
TNFRSF | <407..507 | CDD:304602 | 37/109 (34%) | ||
EGF_Lam | 505..552 | CDD:238012 | 17/49 (35%) | ||
Laminin_EGF | 550..597 | CDD:278482 | 19/46 (41%) | ||
Laminin_B | 660..798 | CDD:278481 | 29/138 (21%) | ||
EGF_Lam | 851..900 | CDD:238012 | 24/48 (50%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 14/30 (47%) | ||
VSP | 953..1414 | CDD:146106 | 105/401 (26%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 20/50 (40%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 4/47 (9%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 6/39 (15%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | 18/46 (39%) | ||
Laminin_EGF | 1199..1247 | CDD:278482 | 22/47 (47%) | ||
EGF_Lam | 1247..1292 | CDD:238012 | 1/44 (2%) | ||
Laminin_EGF | 1294..1342 | CDD:278482 | 22/50 (44%) | ||
Laminin_EGF | 1340..1392 | CDD:278482 | 1/1 (100%) | ||
Laminin_B | 1486..1611 | CDD:278481 | |||
EGF_Lam | 1669..1716 | CDD:238012 | |||
Laminin_EGF | 1718..1767 | CDD:278482 | |||
EGF_Lam | 1772..1819 | CDD:238012 | |||
CrfC | <1933..2267 | CDD:223771 | |||
Laminin_II | 2277..2400 | CDD:283628 | |||
LamG | 2399..>2492 | CDD:304605 | |||
Laminin_G_2 | 2616..2755 | CDD:280389 | |||
Laminin_G_2 | 2804..2944 | CDD:280389 | |||
Laminin_G_2 | 3038..3169 | CDD:280389 | |||
LamG | 3192..3347 | CDD:238058 | |||
lamc1 | NP_775384.1 | LamNT | 30..268 | CDD:214532 | 71/252 (28%) |
EGF_Lam | 269..314 | CDD:238012 | 20/45 (44%) | ||
Laminin_EGF | 326..379 | CDD:278482 | 19/55 (35%) | ||
Laminin_EGF | 382..429 | CDD:278482 | 16/46 (35%) | ||
Laminin_EGF | 429..476 | CDD:278482 | 19/46 (41%) | ||
Laminin_B | 537..662 | CDD:295357 | 33/154 (21%) | ||
EGF_Lam | 707..749 | CDD:238012 | 22/42 (52%) | ||
Laminin_EGF | 812..856 | CDD:278482 | 19/43 (44%) | ||
EGF_Lam | 867..917 | CDD:238012 | 24/132 (18%) | ||
EGF_Lam | 919..964 | CDD:214543 | 22/91 (24%) | ||
Laminin_EGF | 967..1013 | CDD:278482 | 20/46 (43%) | ||
Domain II and I. /evidence=ECO:0000250 | 1014..1593 | 1/2 (50%) | |||
SPEC | 1033..1233 | CDD:295325 | |||
Taxilin | 1035..1308 | CDD:286771 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |