DRSC/TRiP Functional Genomics Resources

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Protein Alignment wb and Ccdc186

DIOPT Version :9

Sequence 1:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster
Sequence 2:NP_739563.1 Gene:Ccdc186 / 213993 MGIID:2445022 Length:917 Species:Mus musculus


Alignment Length:717 Identity:138/717 - (19%)
Similarity:266/717 - (37%) Gaps:167/717 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1783 EGCDVETG---------RCYCREGVTGLKCDKCQAERHHLVD-----NGCKICDNC--------T 1825
            |...:|||         |..|:   |...|.:.:.:..|:.|     |.|...|.|        .
Mouse    52 ESSRLETGAELLSLDSDRILCQ---TNEHCSQIEVQESHIPDCGSGENSCANTDTCPEDSGQIDD 113

  Fly  1826 LLLLDYMELVGNKLRRGMHNMDLTGIPAPYRKLSEYESAYEKW-NGRHWDFSQTKR---RLQDYD 1886
            ....|:.|.| :|.:.  ....:|.|.|..:..:..|:|..|. :...:|...|::   .::...
Mouse   114 FPGGDFTEQV-SKTKE--PEQTVTQILAELKSSAPAEAANPKTASASLYDTDCTRKLISEMKTVS 175

  Fly  1887 SADILKLEAHAENLKFQSRKAVATIGKREFAIKSMREDAVTQQHSV--GLLRSEILQTLSDLHGY 1949
            ::|.|..|..:|.|            ..|||          :.|.|  ||.:.|....|     :
Mouse   176 ASDDLLGEIESELL------------SAEFA----------EGHQVPNGLNKGEQALAL-----F 213

  Fly  1950 GKSAH--YLSLPTALKQARFYLQAIREHDQMVQGIRSTNDCAWKHFYAMGNASDASFDESGRLEM 2012
            .|..|  ||.....:||   .::..:.|.:::..|.|..|...:.............:...:||:
Mouse   214 EKCVHSRYLQQELTVKQ---LIKENKNHQELILNICSEKDSLREELRKRTETEKQHMNTIKQLEL 275

  Fly  2013 LWRDLN---------------------QTNHRVVDMRL----------------QVDRVQEVENE 2040
            ...:||                     |..|:.:..|:                .|.:....|.|
Mouse   276 RIEELNKEIKASKDQLVAQDVTAKNAIQQIHKEMAQRMDQANKKCEEARQEKEAMVMKYVRGEKE 340

  Fly  2041 AEDVLEHVRNLSIRVGESHQELDELNQRISD-HLDPGYLEQ----GEGLLRLTVQRQIMLNGHLN 2100
            |.|:.:....|..::.::.:||::...:|.. ..:.|.|:|    .||.....::....|...:|
Mouse   341 ALDLRKEKETLERKLRDASKELEKNTNKIKQLSQEKGRLQQLYESKEGETTRLIREIEKLKEEMN 405

  Fly  2101 ---------------QLDGYR----ILLNTT--LGVKTEQQREVRKHWLPKAEKHASHLLARSNE 2144
                           ::|.::    .|..||  |....|:..::|::.....:.:......:|||
Mouse   406 SQVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEAEQIRQNCQDMIKTYQESEEIKSNE 470

  Fly  2145 YARKFQPTRNGARIAMLASS-----AHSNITEAINDAR---------LASILAKERVYEAQRTLY 2195
            ...|.:.|:......|...|     .|:.|.| :.|.:         |.::..|.:..|.:|...
Mouse   471 LDAKLRVTKGELEKQMQEKSDQLEMHHAKIKE-LEDLKRTFKEGMDELRTLRTKAKCLEDERLRT 534

  Fly  2196 PSDGSSMIERAKHSLHRSKQLQQEALKQMHKSNVLKDKLHRQEQQVEGIKSTIYDSGLRTNNISG 2260
            ..:    :.:.:..::|.|...|..|.::..::.|.::|...:|::|.:|..:..    .|::..
Mouse   535 EDE----LSKYREIINRQKSEIQNLLDKVKITDQLHEQLQSGKQEIEHLKEEMES----LNSLIN 591

  Fly  2261 QLQGLSDGSARRQAKDSLEMADRTGEQMRAELQ-KAKDMQKSIQNMRNSFSNLEPDWEIKLGMAQ 2324
            .||...:||.:|:::..|.....|.:  .|:|| ::..:|..:.|:..:.|.|:...: ::|.|.
Mouse   592 DLQKDIEGSRKRESELLLFTEKLTSK--NAQLQSESSALQSQVDNLSCTESQLQSQCQ-QMGQAN 653

  Fly  2325 ENIS---LTQTNLRLANVSLSYLEQQAEKEQQVFEVWNNSMAQQLQQLRDQIA--KARHAAEAID 2384
            .|:.   |.:..||...|.    ..|||......||  .:::.|:::|:|::.  :.:||:...|
Mouse   654 RNLESKLLKEEELRKEEVQ----TLQAELSAAQTEV--KALSTQVEELKDELVTQRRKHASNVKD 712

  Fly  2385 VS 2386
            :|
Mouse   713 LS 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wbNP_723870.1 Laminin_N 164..396 CDD:278484
EGF_Lam 401..450 CDD:238012
TNFRSF <407..507 CDD:304602
EGF_Lam 505..552 CDD:238012
Laminin_EGF 550..597 CDD:278482
Laminin_B 660..798 CDD:278481
EGF_Lam 851..900 CDD:238012
Laminin_EGF <943..971 CDD:278482
VSP 953..1414 CDD:146106
Laminin_EGF 974..1018 CDD:278482
EGF_Lam 1017..1065 CDD:238012
Laminin_EGF 1065..>1105 CDD:278482
EGF_Lam 1150..1197 CDD:238012
Laminin_EGF 1199..1247 CDD:278482
EGF_Lam 1247..1292 CDD:238012
Laminin_EGF 1294..1342 CDD:278482
Laminin_EGF 1340..1392 CDD:278482
Laminin_B 1486..1611 CDD:278481
EGF_Lam 1669..1716 CDD:238012
Laminin_EGF 1718..1767 CDD:278482
EGF_Lam 1772..1819 CDD:238012 11/49 (22%)
CrfC <1933..2267 CDD:223771 71/412 (17%)
Laminin_II 2277..2400 CDD:283628 28/116 (24%)
LamG 2399..>2492 CDD:304605
Laminin_G_2 2616..2755 CDD:280389
Laminin_G_2 2804..2944 CDD:280389
Laminin_G_2 3038..3169 CDD:280389
LamG 3192..3347 CDD:238058
Ccdc186NP_739563.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 138/717 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 97..118 3/20 (15%)
Taxilin 315..645 CDD:286771 62/340 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 701..769 4/14 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1836
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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