Sequence 1: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_492775.2 | Gene: | lam-3 / 172952 | WormBaseID: | WBGene00002248 | Length: | 3102 | Species: | Caenorhabditis elegans |
Alignment Length: | 3340 | Identity: | 962/3340 - (28%) |
---|---|---|---|
Similarity: | 1502/3340 - (44%) | Gaps: | 596/3340 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 146 SSSFSGGLYPPLFNVVPRAQISVNATCGQNGAEEYCKQV-----------GAKPCGICNAHSSDR 199
Fly 200 AKQRSIQSLISSGSGSGSGSGFEEGWWQSPTLQGGRQFEYVTILLDLKQTFQIFSVWLKSANSPR 264
Fly 265 PASWILEKSLDGINFEPWQYFGLSDADCQRRWNLSGQNGKYVFQNDTEIICSTQFSKPGPLENGV 329
Fly 330 LHASLLKNRPGATDQSPELMKFITTRYIRIRLQGMHSTANQD--------NSLDWLLDSPSLEKH 386
Fly 387 SFYSLSQLKVSARLDCNGHANRSHESPDDPL---MQCICQHNTCGAQCEQCCPLFQDRPYQMG-- 446
Fly 447 ---GECEICQCYGHAESCTYDPFLDK--------------GICQSCSNNTAGIECEFCEMGFYRE 494
Fly 495 --LDAPLTDPCLPCSCNPARS-TGGCQSDG---------GSCNCLEGFQGKNCEECAPGYYG-DD 546
Fly 547 CKRCECDERGSLGSTGSCSGV-CQCKLNVEGSTCSECAPGYFDLSAENAEGCTSCWCSGVSQTCH 610
Fly 611 SAKLQTLAFETLNDWKITDIQRVKPISIPVDAETNRLIFANELDEVEAIYWQASLGYLGNRLTSY 675
Fly 676 GSRLQLVLSWDVIRGDRSGKPTTGPNVILVGKNGLKIAFGDESLDGLGINLNVTLTEVGWYHVPP 740
Fly 741 TVVDIKTRLRRTE-------GGDYHGES---VTRSQFLSVLVSLDAVLIRAAFHTDQ-------- 787
Fly 788 --------------GETSLERAVIYSGGVELGGKSSSQVEQCLCPAGYTGLSCEGCAFGFKRIYE 838
Fly 839 NTSDHQIL-SKCIPCPCNGHSNSCDLQSGNCGDCMHNTFGDRCERCQLGYYGNPLQGTP-NDCKR 901
Fly 902 CACPLSEDSNNFSPSCQLKSYNYMDLNPQFELI------------EHAEYICTQCPEGYTGDHCQ 954
Fly 955 VCDDGYFGNPRQPGSSCQRCDCAG-------GPCNVTTGECITCRGNTEGWHCERCKLGYWGDPA 1012
Fly 1013 V-GCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKCDECDVGYANVELRCPSCNCDPLGSLVQD 1076
Fly 1077 RCDPHTGQCHCKEGVMGAKCHECQDGYFGMNAVAYRMDDLAALRQNSDSDDDEWELVPDTEDPNS 1141
Fly 1142 ESTVACEECHCSSVGSL-SSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHG 1205
Fly 1206 SRGHECNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQVCDPHNGRCICPKFT 1270
Fly 1271 RGLGCGQCVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQCQCREGYSGRKCDTCAIGYFGYP 1335
Fly 1336 ECRRCGCDAEGS--FTQADGSIACDSNGQCPCKSLVVGLKCDTCMQSTFGLSAQNPEGCTRCFCF 1398
Fly 1399 GRSGECEQSDLSWGHIRMAESRNLSVQQIRPHSVPSSDYEYIVVVQMEGSSFHREDAEIQRMNDL 1463
Fly 1464 SLVPKSTGNVSIGAYGQFYHPLYFQLPPQFYGDRTSSYGGFLYFTLITE----GAH--KPLERNI 1522
Fly 1523 LGQYPLVQLHAHSKLLLDFYEYEEFEYSLNVTHRVPLHESFWKYHHTSQ-AVDRNTLMAALQNIR 1586
Fly 1587 HIFIR-AFAF-ADFQEVVLQNVHMDAAI----YIKGSTNLIAKGVERC-KCPKRFDGLSCQDPGR 1644
Fly 1645 SFYRWRNTTIVESVFIEDLIGRAAPCHCNGRSSDCDRETGVCQNCRGNTGGDHCHQCAEGFYGD- 1708
Fly 1709 -PNSPHGCQACPCPETNRNFARGCNVWD---GEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTT 1769
Fly 1770 CQPCNCHPDGIQTEGCDVETGRCYCREGVTGLKCDKCQAERHHLVDNGCKICD-NCTLLLLDYME 1833
Fly 1834 LVGNKLRRGMHNMDLTGI-PAPYRKLSEYESAYEKWNGRHWDFSQTKRRLQDY-----DSADILK 1892
Fly 1893 LEAHAENLKFQSRKAVATIGKREFAIKSMREDAVTQQHSVGLLRSEILQTLSDLHGYGKSAHYL- 1956
Fly 1957 -------------SLPTALKQARFYLQAIREHDQMVQGIRSTNDCAWKHFYA-----MGNA---S 2000
Fly 2001 DASFDE-SGRLEMLWRDLNQTNHRVVD-----------MRL----QVDRVQEVEN-------EAE 2042
Fly 2043 DVLEHVRNLSIRVGESH------QELDELNQRISDHLDPGYLEQGEGLLRLTVQRQIMLNGHLNQ 2101
Fly 2102 LDGYRILLNTTLGVKTEQQREVRKHWLPKAEKHASHLLARSNEYARKFQPTRNGARIAMLASSAH 2166
Fly 2167 SNITEAINDARLASILAKERVYEAQRTLYPSDGSSMIERAKHSLHR--SKQLQQEALKQMHKSNV 2229
Fly 2230 LK--DKLHRQEQQVEGIKSTIYDSGLRTNNISGQLQGLSDGSARRQA--KDSLEMADRTGEQMRA 2290
Fly 2291 EL--------QKAKDMQKSIQNMRNSFSNLEPDWEIKLGMAQENISLTQTNLRLANVSLSYLEQQ 2347
Fly 2348 AEKEQQVF---EVWNNSMAQQLQQLRDQIAKARHAAEAIDVSLESLGPK--CIRSYL-PASYGLS 2406
Fly 2407 TSNKIRMSFALSNHLESSPLIHLASSEGR------HITLELYKRRVRLVWNLGGTTATVT--HPM 2463
Fly 2464 -VVHTRDPKYDDAWYHVEANRTLNLGSLVVRRMNNY-GELTPPN-PV-IITGSTDTEHTRFYQSR 2524
Fly 2525 SD-RISLG--GFASKDLQFTP-GLNVVVHQVEVDNKPLGLWNFVTSEGSCGGSMVGAKESSASST 2585
Fly 2586 ARHFNGLGYAQLMKTRPRPTRKNLFSVQMTFRTLDENALLFLAVDDKNNRSVSVTLSRGRIMFRI 2650
Fly 2651 DYGDESKLEINTTKKYNVGQWIKIEAAR--------------EFSAKRSTENGMLRVNNDRPISG 2701
Fly 2702 APTLPVNIHLLPDLSKTVYYLGGVPPGFTSGTSKAPGAD---NPFLGC---MKDVQVNGETYDPL 2760
Fly 2761 ESSSYYGVEPSCKNM--ITK--AGFSGNGYLELPSQSLRKRSNTALVFRTLQPDCLLLLAAYPPE 2821
Fly 2822 ILGDYDAKDI-KGNFSISLVDGQLHVWVN---SGRSFIKMSSNSSQMNDGEFHVVHLIKTGRKLE 2882
Fly 2883 LMVDD-ELQEIRNLNGNPTVVSLPRDAGGLYIGG-----APPHESYTPLAPTFVNLEGAIRDVVF 2941
Fly 2942 NNRTINFNDALTFANVQIGR--------NGPLMGSLKGGLYDVLLKTEPMIGKSFTASPEGCKRI 2998
Fly 2999 GSYS----YEPNAFKFGDDIY------SYSQLKLPERHFWQRNFHLSFDFRSFYP---------- 3043
Fly 3044 ------NGMLYLSPGSKEKPKHYVALVLKDGQLVLVVRGRRREEL--QLTAKLNDGEWHRVTISC 3100
Fly 3101 HDRKVTMSVE----IGRTDQKTSAQMKLPKKIGASQLLLVGGLPQSPVKVSSDLYVRLEPFKGCL 3161
Fly 3162 RRVSINNNT-QDLARPGKHSNVGQC 3185 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | 97/250 (39%) |
EGF_Lam | 401..450 | CDD:238012 | 22/56 (39%) | ||
TNFRSF | <407..507 | CDD:304602 | 45/123 (37%) | ||
EGF_Lam | 505..552 | CDD:238012 | 21/57 (37%) | ||
Laminin_EGF | 550..597 | CDD:278482 | 21/47 (45%) | ||
Laminin_B | 660..798 | CDD:278481 | 36/169 (21%) | ||
EGF_Lam | 851..900 | CDD:238012 | 22/49 (45%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 11/27 (41%) | ||
VSP | 953..1414 | CDD:146106 | 193/471 (41%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 19/51 (37%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 20/47 (43%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 18/39 (46%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | 22/47 (47%) | ||
Laminin_EGF | 1199..1247 | CDD:278482 | 24/47 (51%) | ||
EGF_Lam | 1247..1292 | CDD:238012 | 18/44 (41%) | ||
Laminin_EGF | 1294..1342 | CDD:278482 | 23/47 (49%) | ||
Laminin_EGF | 1340..1392 | CDD:278482 | 23/53 (43%) | ||
Laminin_B | 1486..1611 | CDD:278481 | 40/133 (30%) | ||
EGF_Lam | 1669..1716 | CDD:238012 | 19/48 (40%) | ||
Laminin_EGF | 1718..1767 | CDD:278482 | 24/51 (47%) | ||
EGF_Lam | 1772..1819 | CDD:238012 | 21/46 (46%) | ||
CrfC | <1933..2267 | CDD:223771 | 79/388 (20%) | ||
Laminin_II | 2277..2400 | CDD:283628 | 26/136 (19%) | ||
LamG | 2399..>2492 | CDD:304605 | 27/102 (26%) | ||
Laminin_G_2 | 2616..2755 | CDD:280389 | 36/158 (23%) | ||
Laminin_G_2 | 2804..2944 | CDD:280389 | 39/149 (26%) | ||
Laminin_G_2 | 3038..3169 | CDD:280389 | 35/152 (23%) | ||
LamG | 3192..3347 | CDD:238058 | |||
lam-3 | NP_492775.2 | LamNT | 42..294 | CDD:214532 | 103/269 (38%) |
EGF_Lam | 296..343 | CDD:238012 | 21/49 (43%) | ||
EGF_Lam | <384..411 | CDD:214543 | 12/26 (46%) | ||
Laminin_EGF | 423..480 | CDD:278482 | 21/56 (38%) | ||
EGF_Lam | 477..526 | CDD:238012 | 22/49 (45%) | ||
LamB | 583..711 | CDD:214597 | 33/156 (21%) | ||
EGF_Lam | 774..818 | CDD:238012 | 22/43 (51%) | ||
Laminin_EGF | 889..943 | CDD:278482 | 21/53 (40%) | ||
EGF_Lam | 941..985 | CDD:214543 | 17/43 (40%) | ||
EGF_Lam | 988..1033 | CDD:214543 | 19/81 (23%) | ||
EGF_Lam | 1036..1083 | CDD:214543 | 21/46 (46%) | ||
Laminin_EGF | 1086..1134 | CDD:278482 | 24/47 (51%) | ||
EGF_Lam | 1133..1179 | CDD:238012 | 18/45 (40%) | ||
Laminin_EGF | 1181..1229 | CDD:278482 | 23/47 (49%) | ||
Laminin_EGF | 1227..1281 | CDD:278482 | 23/53 (43%) | ||
LamB | 1341..1478 | CDD:214597 | 43/140 (31%) | ||
EGF_Lam | 1539..1583 | CDD:238012 | 19/43 (44%) | ||
EGF_Lam | 1590..1637 | CDD:214543 | 22/46 (48%) | ||
EGF_Lam | 1646..1694 | CDD:238012 | 22/48 (46%) | ||
BAR | 1848..2058 | CDD:299863 | 51/242 (21%) | ||
PspA | 1864..2121 | CDD:224755 | 62/301 (21%) | ||
Laminin_II | 2157..2286 | CDD:283628 | 28/131 (21%) | ||
LamG | 2285..2443 | CDD:214598 | 36/161 (22%) | ||
LamG | 2471..2622 | CDD:238058 | 36/183 (20%) | ||
LamG | 2655..2821 | CDD:238058 | 46/172 (27%) | ||
LamG | 2919..3065 | CDD:238058 | 35/157 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 89 | 1.000 | Domainoid score | I5032 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1275 | 1.000 | Inparanoid score | I75 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D128982at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004257 | |
OrthoInspector | 1 | 1.000 | - | - | oto18492 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100395 | |
Panther | 1 | 1.100 | - | - | O | PTHR10574 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2997 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.830 |