Sequence 1: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032511.3 | Gene: | Lamc2 / 16782 | MGIID: | 99913 | Length: | 1193 | Species: | Mus musculus |
Alignment Length: | 694 | Identity: | 223/694 - (32%) |
---|---|---|---|
Similarity: | 322/694 - (46%) | Gaps: | 135/694 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 450 EICQCYGHAESCTYDPFLDKGI-----CQSCSNNTAGIECEFCEMGFYRELDAPLTDPCLPCSCN 509
Fly 510 PARS-TGGCQSDGGSCNCLEGFQGKNCEECAPGYY-----------GDDCKRCECDERGSLGSTG 562
Fly 563 SC-SGVCQCKLNVEGSTCSECAPGYFDLSAENAEGCTSCWCSGVSQTCHSA------KLQTLAFE 620
Fly 621 TLNDWKITDIQRVKPISIPVD---AETNRLIFANELDEVEAIYWQASLGYLGNRLTSYGSRLQLV 682
Fly 683 LSWDVIRGDRSGKPTTGPNVILVGKNGLKIAFGDESLDGLGINLNVTLTEVGWYHVPPTVVDIKT 747
Fly 748 RLRRTEGGDYH-GESVTRSQFLSVLVSLDAVLIRAAFHTDQGETS---LERAVIYSGGVELGGKS 808
Fly 809 SSQVEQCLCPAGYTGLSCEGCAFGFKRIYENTSDHQILSKCIPCPCNGHSNSCDLQSGNCGDCMH 873
Fly 874 NTFGD-----RCERCQLGYYGNPLQGTPNDCKRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFEL 933
Fly 934 IEHAEYICTQCPEGYTGDHCQVCDDGYFGNP---RQPGSSCQRCDC-------AGGPCNVTTGEC 988
Fly 989 ITCRGNTEGWHCERCKLGYWGD-----PAVGCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKC 1048
Fly 1049 DECDVGYANVELRCPSCNCDPLGSLVQDRCDPHTGQCHCKEGVM 1092 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | |
EGF_Lam | 401..450 | CDD:238012 | 223/694 (32%) | ||
TNFRSF | <407..507 | CDD:304602 | 25/61 (41%) | ||
EGF_Lam | 505..552 | CDD:238012 | 17/58 (29%) | ||
Laminin_EGF | 550..597 | CDD:278482 | 21/47 (45%) | ||
Laminin_B | 660..798 | CDD:278481 | 36/141 (26%) | ||
EGF_Lam | 851..900 | CDD:238012 | 16/53 (30%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 14/30 (47%) | ||
VSP | 953..1414 | CDD:146106 | 58/155 (37%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 22/55 (40%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 18/47 (38%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 6/28 (21%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | |||
Laminin_EGF | 1199..1247 | CDD:278482 | |||
EGF_Lam | 1247..1292 | CDD:238012 | |||
Laminin_EGF | 1294..1342 | CDD:278482 | |||
Laminin_EGF | 1340..1392 | CDD:278482 | |||
Laminin_B | 1486..1611 | CDD:278481 | |||
EGF_Lam | 1669..1716 | CDD:238012 | |||
Laminin_EGF | 1718..1767 | CDD:278482 | |||
EGF_Lam | 1772..1819 | CDD:238012 | |||
CrfC | <1933..2267 | CDD:223771 | |||
Laminin_II | 2277..2400 | CDD:283628 | |||
LamG | 2399..>2492 | CDD:304605 | |||
Laminin_G_2 | 2616..2755 | CDD:280389 | |||
Laminin_G_2 | 2804..2944 | CDD:280389 | |||
Laminin_G_2 | 3038..3169 | CDD:280389 | |||
LamG | 3192..3347 | CDD:238058 | |||
Lamc2 | NP_032511.3 | Laminin_EGF | 28..86 | CDD:365839 | 25/60 (42%) |
EGF_Lam | 83..127 | CDD:238012 | 15/44 (34%) | ||
Laminin_EGF | 139..184 | CDD:365839 | 21/47 (45%) | ||
Laminin_B | 245..370 | CDD:383018 | 37/151 (25%) | ||
EGF_Lam | 461..509 | CDD:238012 | 22/67 (33%) | ||
Laminin_EGF | 517..564 | CDD:365839 | 19/46 (41%) | ||
EGF_Lam | 572..>604 | CDD:238012 | 15/32 (47%) | ||
Cell attachment site. /evidence=ECO:0000255 | 586..588 | 0/2 (0%) | |||
SMC_prok_B | <614..1192 | CDD:274008 | 5/27 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |