Sequence 1: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032508.3 | Gene: | Lamb1 / 16777 | MGIID: | 96743 | Length: | 1786 | Species: | Mus musculus |
Alignment Length: | 2247 | Identity: | 510/2247 - (22%) |
---|---|---|---|
Similarity: | 783/2247 - (34%) | Gaps: | 778/2247 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 151 GGLYPPLFN-VVPRAQ-ISVNATCGQNGAEEYC---KQVGAKPCGICNA----HSSDRAKQRSIQ 206
Fly 207 SLISSGSGSGSGSGFEEG----WWQSPTLQGGRQFEYVTILLDLKQTFQIFSVWLKSANSPRPAS 267
Fly 268 WILEKSLD-GINFEPWQYFGLSDADCQRRW-NLSGQNGKYVFQNDTEIICSTQFSKPGPLENG-V 329
Fly 330 LHASLLKNRPGATDQSPELMKFITTRYIRIRLQGMHSTANQDNSLDWLLDSPSLEKHSFYSLSQL 394
Fly 395 KVSARLDCNGHANRSHESPDDPLMQ---------CICQHNTCGAQCEQCCPLFQDRPY-----QM 445
Fly 446 GGECEICQCYGHAESCTYD--PFL-----DKGICQSCSNNTAGIECEFCEMGFYRELDAPLTDP- 502
Fly 503 -CLPCSCNPARSTGGCQSDG----------GSCNCLEGFQGKNCEECAPGYY---GDD---CKRC 550
Fly 551 ECDERGSLGSTGSC---SGVCQCKLNVEGSTCSECAPGYFDLSAENAEGCTSCWC---SGVSQTC 609
Fly 610 HSAKLQTLAFETLNDWKITDIQRVKPISIPVDAETNRLIFANELDEVEAIYW------------Q 662
Fly 663 ASLG---------YLGNRLTSY----------GSRLQLVLS---------------------WD- 686
Fly 687 -VIRGDRSGK-----------PTTGPNVILVGKNGLKIAFGDESLDGLGINLNVTLTEVGWY--- 736
Fly 737 ----HVPPTVVD-------IKTRLRRTEGGDYHGESVTRSQFLSVLVSLDAVLIRAAFHTDQGET 790
Fly 791 SLE--------------RAVIYSGGVELGGKSSSQVEQCLCPAGYTGLSCEGCAFGFKRIYENTS 841
Fly 842 DHQILSKCIPC-PCNGHSNSCDLQSGNCGDCMHNTFGDRCERCQLGYYGNPLQGTPNDCKRCACP 905
Fly 906 LSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCP--EGYTGDHCQVCDDGYFGNPRQPG 968
Fly 969 SSCQRCDCAGG--PCNVTTGECITCRGNTEGWHCERCKLGYWGDPAVG----CDPCHCHTEGSES 1027
Fly 1028 G-----LC--DSTDGQ--CLCKPRYAGQKCDECDVGY----ANVELRCPSCNC-------DPLGS 1072
Fly 1073 LVQDRCDPHTGQC-HCKEGVMGAKCHECQDGYFGMNAVAYRMDDLAALRQNSDSDDDEWELVPDT 1136
Fly 1137 EDPNSESTVACEECHCSSVGSL-----SSD--CDKRTGQCACLANVTGRRCDKCRPGHWNLTAGE 1194
Fly 1195 GCRDCRCDPHGSRGHECNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQVCDP 1259
Fly 1260 HNGRCICPKFTRGLGCGQCVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQCQCREGYSGRKC 1324
Fly 1325 DTCAIGYFG-YPECRRCGCDAEGSFTQADGSIACDSNGQCPCKSLVVGLKCDTCMQSTFGLSAQN 1388
Fly 1389 PEGCTRCFCFGRSGECEQSDLSWGHIRMAESRNLSVQQIRPHSVPSSDYEYIVVVQMEG-SSFHR 1452
Fly 1453 E--DAEIQRMND----LSLVPKSTGNVSIGAYGQFYHPLYFQLPPQFYGDRTSSYGGFLYFTLIT 1511
Fly 1512 EGAHKPLERNILGQYPLVQLHAHS--KLLLDFYEYEEFEYSLNVTHRVPLHESFWKYHHTSQAVD 1574
Fly 1575 RNTLMAALQNIRHIFIRAFAFADFQEVVLQNVHMDAAIYIKGSTNLIAKGVERCKCPKRFDGLSC 1639
Fly 1640 QDPGRSFYRWRNTTIVESVF----IEDL-IGRAAPC------------HCNGRSSDCDRETGVCQ 1687
Fly 1688 NCRGNTGGDHCHQCAEGFYGDPNSPHGCQACPCPETNRNFARGCNVWDGEVSCVCKPGYTGRLCE 1752
Fly 1753 RCQAGYFGDPMRYPNTTCQPCNCHPDGIQTEGCDVETGRCYCREGVTGLKCDKCQAERHHLVDNG 1817
Fly 1818 CKICDNCTLLLLDYMELVGNKLRRGMHNMDLTGIPAPYRKLSEYESAYEKWNGRHWDFSQTKRRL 1882
Fly 1883 QDYDSA-----DILKLE-----AHAENLKFQSRKAVATIGKREFAIKSMREDAVTQQHSVGLLRS 1937
Fly 1938 EILQTLSDLHGYGKSAHYLSLPT-----ALKQAR----FYLQAIREHDQMVQGIRSTNDCAWKHF 1993
Fly 1994 YAMGNASDASFDESGRLEMLWRDLNQTNHRVVDMRLQVDRVQEVENEAEDVLEHVRNLSIRVGES 2058
Fly 2059 HQELDELNQRISDHLDPGYLEQGEGLLRLTVQRQIMLNGHLNQLDGYRILLNTTLGVKTEQQREV 2123
Fly 2124 RKHWLPKAE---KHASHLLARSN-------EYARKFQ 2150 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | 63/246 (26%) |
EGF_Lam | 401..450 | CDD:238012 | 18/62 (29%) | ||
TNFRSF | <407..507 | CDD:304602 | 36/122 (30%) | ||
EGF_Lam | 505..552 | CDD:238012 | 21/62 (34%) | ||
Laminin_EGF | 550..597 | CDD:278482 | 15/49 (31%) | ||
Laminin_B | 660..798 | CDD:278481 | 41/230 (18%) | ||
EGF_Lam | 851..900 | CDD:238012 | 17/49 (35%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 9/29 (31%) | ||
VSP | 953..1414 | CDD:146106 | 148/495 (30%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 22/49 (45%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 19/60 (32%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 16/47 (34%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | 25/53 (47%) | ||
Laminin_EGF | 1199..1247 | CDD:278482 | 20/47 (43%) | ||
EGF_Lam | 1247..1292 | CDD:238012 | 2/44 (5%) | ||
Laminin_EGF | 1294..1342 | CDD:278482 | 21/48 (44%) | ||
Laminin_EGF | 1340..1392 | CDD:278482 | 1/51 (2%) | ||
Laminin_B | 1486..1611 | CDD:278481 | 17/126 (13%) | ||
EGF_Lam | 1669..1716 | CDD:238012 | 11/58 (19%) | ||
Laminin_EGF | 1718..1767 | CDD:278482 | 8/48 (17%) | ||
EGF_Lam | 1772..1819 | CDD:238012 | 5/46 (11%) | ||
CrfC | <1933..2267 | CDD:223771 | 41/237 (17%) | ||
Laminin_II | 2277..2400 | CDD:283628 | |||
LamG | 2399..>2492 | CDD:304605 | |||
Laminin_G_2 | 2616..2755 | CDD:280389 | |||
Laminin_G_2 | 2804..2944 | CDD:280389 | |||
Laminin_G_2 | 3038..3169 | CDD:280389 | |||
LamG | 3192..3347 | CDD:238058 | |||
Lamb1 | NP_032508.3 | Laminin_N | 44..269 | CDD:365840 | 65/251 (26%) |
EGF_Lam | 271..323 | CDD:238012 | 18/53 (34%) | ||
EGF_Lam | 335..387 | CDD:238012 | 17/51 (33%) | ||
Laminin_EGF | 398..455 | CDD:365839 | 17/56 (30%) | ||
Laminin_EGF | 458..512 | CDD:365839 | 18/54 (33%) | ||
EGF_Lam | 509..>548 | CDD:238012 | 7/64 (11%) | ||
EGF_Lam | 773..818 | CDD:214543 | 19/73 (26%) | ||
Laminin_EGF | 821..869 | CDD:365839 | 18/75 (24%) | ||
EGF_Lam | 866..911 | CDD:238012 | 21/44 (48%) | ||
Laminin_EGF | 917..973 | CDD:365839 | 17/56 (30%) | ||
Laminin_EGF | 976..1025 | CDD:365839 | 21/89 (24%) | ||
Laminin_EGF | 1028..1082 | CDD:365839 | 25/53 (47%) | ||
Laminin_EGF | 1084..1132 | CDD:365839 | 24/94 (26%) | ||
Laminin_EGF | 1132..>1171 | CDD:365839 | 18/38 (47%) | ||
Domain II | 1179..1397 | 51/321 (16%) | |||
SCP-1 | <1201..1667 | CDD:114219 | 108/650 (17%) | ||
Domain alpha | 1398..1430 | 14/64 (22%) | |||
Domain I | 1431..1786 | 72/420 (17%) | |||
SMC_prok_B | 1456..>1776 | CDD:274008 | 70/395 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |