DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wb and Lama5

DIOPT Version :9

Sequence 1:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster
Sequence 2:NP_001178538.1 Gene:Lama5 / 140433 RGDID:621023 Length:3713 Species:Rattus norvegicus


Alignment Length:4248 Identity:940/4248 - (22%)
Similarity:1415/4248 - (33%) Gaps:1618/4248 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 LQKSGG----GAGGGA-----------LRLLKTEDVYSSSFSGG----LYPPLFNVVPRAQISVN 169
            :.|.||    |...||           |.|.....|..:...||    |:||.||:...|:|:.:
  Rat     1 MAKRGGQLCVGCAPGARGPRSLAPLPLLLLAGLALVGEARIPGGDGFSLHPPYFNLAEGARITAS 65

  Fly   170 ATCGQNG---------AEEYCKQVG-------------AKPCGICNAHSSDRAKQRSIQSLISSG 212
            ||||:..         .:.|||.||             .:.|.||.|.:|::|  ..:.:.|.. 
  Rat    66 ATCGEEAPTRSASRPTEDLYCKLVGGPVAGGDPNQTIQGQYCDICIAANSNKA--HPVSNAIDG- 127

  Fly   213 SGSGSGSGFEEGWWQSPTLQGGRQFEYVTILLDLKQTFQIFSVWLKSANSPRPASWILEKSLD-G 276
                     .|.|||||.|..|.::..|.:.|||.|.|.:..|.:|.||||||..|:||:|.| |
  Rat   128 ---------TERWWQSPPLSRGPEYNEVNVTLDLGQVFHVAYVLIKFANSPRPDLWVLERSTDFG 183

  Fly   277 INFEPWQYFGLSDADCQRRWNLSGQNGKYVFQNDTEIICSTQFSKPGPLENGVLHASLLKNRPGA 341
            ..::|||:|..|..||..|:   |.........|.::||:|::|:..|||||.:..||:..||||
  Rat   184 HTYQPWQFFASSKRDCLERF---GPRTLERITQDDDVICTTEYSRIVPLENGEIVVSLVNGRPGA 245

  Fly   342 TD--QSPELMKFITTRYIRIRLQGMHSTANQDNSLDWLLDSPSLEKHSFYSLSQLKVSARLDCNG 404
            .:  .||.|..|  |:...|||:.:.:.....:.:...|..|::.:..:||:..:.:..|..|:|
  Rat   246 RNFSYSPVLRDF--TKATNIRLRFLRTNTLLGHLMGKALRDPTVTRRYYYSIKDISIGGRCVCHG 308

  Fly   405 HAN-RSHESPDDPL-MQCICQHNTCGAQCEQCCPLFQDRPYQ-----MGGECEICQCYGHAESCT 462
            ||: ...:.|.||. :||.|||||||..|::|||.|..:|::     ...||:.|.|:|||..|.
  Rat   309 HADVCDAKDPSDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCY 373

  Fly   463 YDPFLDK--------------GICQSCSNNTAGIECEFCEMGFYRELDAPLTDP--CLPCSCNPA 511
            |||.:|:              |:|..|.::|.||.||.|..||||..|.||..|  |.||.|...
  Rat   374 YDPEVDRRNASQNLDNVYQGGGVCLDCQHHTTGINCERCVPGFYRAPDQPLDSPHVCQPCDCESD 438

  Fly   512 RSTGGCQSDGGSCNCLEGFQGKNCEECAPGY-------------YGDDCKR---------CECDE 554
            .:.|.|:...|.|.|...|.|:.|..||.||             :.|..::         |:|:.
  Rat   439 FTDGTCEDLTGRCYCRPNFTGERCSACAEGYVDFPHCYPLPSFPHNDTGEQVLPAGQIVNCDCNA 503

  Fly   555 RGSLGSTGSCS-----GVCQCKLNVEGSTCSECAPGYFDLSAENAEGCTSCWCSGVSQTCHSAKL 614
            .|:.|:  :|.     |.|.||.|.:|:.|..||||::..|      |..|.||           
  Rat   504 AGTQGN--ACRKDPRLGRCVCKPNFQGNHCELCAPGFYGPS------CHPCQCS----------- 549

  Fly   615 QTLAFETLNDWKITDIQRVKPISIPVDAETNRLIFANELDEVEAIYWQASLGYLGNRLTSYGSRL 679
                                                                             
  Rat   550 ----------------------------------------------------------------- 549

  Fly   680 QLVLSWDVIRGDRSGKPTTGPNVILVGKNGLKIAFGDESLDGLGINLNVTLTEVGWYHVPPTVVD 744
                               .|.|    .|||                           ..|    
  Rat   550 -------------------SPGV----ANGL---------------------------CDP---- 560

  Fly   745 IKTRLRRTEGGDYHGESVTRSQFLSVLVSLDAVLIRAAFHTDQGETSLERAVIYSGGVELGGKSS 809
                    |.|                                                      
  Rat   561 --------ESG------------------------------------------------------ 563

  Fly   810 SQVEQCLCPAGYTGLSCEGCAFGFKRIYENTSDHQILSKCIPC-PCNGHSNSCDLQSGNCGDCMH 873
                ||.|..|:.|..|:.||.|:        .|..|.:...| |.......|| :||:| .|..
  Rat   564 ----QCTCRTGFEGDKCDHCALGY--------FHFPLCQLCGCSPAGTLPQGCD-ESGHC-QCRP 614

  Fly   874 NTFGDRCERCQLGYYGNPLQGTPNDCKRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAE 938
            ...|..|:||..||:|.|      ||..|||   :...:....|                  .|.
  Rat   615 GFDGPHCDRCLPGYHGYP------DCHACAC---DPRGSLDQQC------------------GAG 652

  Fly   939 YICTQCPEGYTGDHCQVCDDGYFGNPRQPGSSCQRCDCAGG-----PCNVTTGEC---------- 988
            .:| .|..||||..||.|..|::|.|     ||..|.|:..     .|:.|||:|          
  Rat   653 GLC-HCRPGYTGATCQECSPGFYGFP-----SCIPCHCSADGSMHTTCDPTTGQCRCRPRVTGLR 711

  Fly   989 -------------------------------------ITCRGNTEGWHCERCKLGYWG----DPA 1012
                                                 .|||.:.||..|:|||.||||    :|.
  Rat   712 CDMCVPGAYNFPYCEAGSCHPAGLAPANPALPEAQAPCTCRAHVEGPSCDRCKPGYWGLSSSNPE 776

  Fly  1013 VGCDPCHCHTEGSESGLCD-STDGQCLCKPRYAGQKCDECDVGYANVE----LRCPSCNCDPLGS 1072
             ||..|.|...|:..|:.: ..:|||.||....|:.|..|..|:..::    ..|.||.||..|:
  Rat   777 -GCTRCSCDPRGTLGGVTECQGNGQCFCKAHVCGKTCAACKDGFFGLDHADYYGCRSCRCDVGGA 840

  Fly  1073 LVQDRCDPHTGQCHCKEGVMGAKCHE-CQDGY-----------------------FGMNAVAYR- 1112
            |.|. |:|.||.|.|:....|..|.| .:|.|                       ||.|.:.:. 
  Rat   841 LGQG-CEPKTGACRCRPNTQGPSCSEPAKDHYLPDLHHIRLELEEAATPEGHAVRFGFNPLEFEN 904

  Fly  1113 -----------MDDLAALRQNSDSDD--------------------------------------- 1127
                       :......|.|..|.|                                       
  Rat   905 FSWRGYAHMTAIQPRIVARLNVTSPDLFRLVFRYVNRGSTSVNGQVSVREEGKFSSCTNCTEQSQ 969

  Fly  1128 ----------------------------DEWELVPDTED---------PNS---------ESTVA 1146
                                        ..|.|:.:.|.         |::         ..|.|
  Rat   970 PVAFPPSTEPAFVTVPQRGFGEPFVLNPGTWALLVEAEGVLLDYVVLLPSTYYEAALLQHRVTEA 1034

  Fly  1147 C----------EEC--------------------------------------------------- 1150
            |          |.|                                                   
  Rat  1035 CTYHPSALHPTENCLLYAHLPLDGFPSAAGTEALCRHDNSLPRPCPTEQLSPLHPPLATCAGSDV 1099

  Fly  1151 ----------------------------------------------------------------H 1151
                                                                            |
  Rat  1100 DIQLEMAVPRPGRYALVVEYVSEYSHQEMGVAVHTPQRAPQQGMIDLHPCPYSSLCRGPARDTQH 1164

  Fly  1152 CSSVGSLSSDCDKR----------------------------------------TGQCACLAN-- 1174
            ..:|..|.|:...|                                        .|..||||:  
  Rat  1165 HLAVFHLDSEASIRLTAEQAHFFLHSVTLIPVEEFSAEFVEPRVFCVSSHGAFNPGSAACLASRF 1229

  Fly  1175 ------VTGRRCD-------------------------KCRP----------------------- 1185
                  :..:.|.                         :.||                       
  Rat  1230 PKPPQPIVLKDCQVLPLPPDLPLTQSQELSPGASPVGPQPRPPTAVDPNAEPTLIRHPQGTVVFT 1294

  Fly  1186 ------------------------------------GHWNLT---AGEGCR-------------- 1197
                                                ||.|.:   .|.|||              
  Rat  1295 TQVPTLGRYAFLLHSYQPVHPSFPVEVLIDGGRIWQGHANASFCPHGYGCRTLVSCEGQTMLDVT 1359

  Fly  1198 ----------------------------------------------------------------- 1197
                                                                             
  Rat  1360 DNELAVTVRVPEGRWLWLDYILVVPEDAYSSSYLQEEPLDKSYDFISHCATQGYHISPSSSSLFC 1424

  Fly  1198 ----------------DCRCDPHGSRGHECNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQR 1246
                            .|.|...|:.|..|.|:.|||.|:..|.|:.|:.|..|::||     ..
  Rat  1425 RNAATSLSLFYNNGALPCGCHEVGAVGPTCEPFGGQCPCRGHVIGRDCSRCATGYWGF-----PN 1484

  Fly  1247 CSACRSEGQVCDPHNGRCICPKFTRGLGCGQCVPGTWGWQARLGCRECECDHIG---SIGQQCST 1308
            |..|....::||...|:||||..|....|..|.|.::|....:||.||.|...|   .....|..
  Rat  1485 CRPCDCGARLCDELTGQCICPPRTVPPDCLVCQPQSFGCHPLVGCEECNCSGPGVQELTDPTCDM 1549

  Fly  1309 GDGQCQCREGYSGRKCDTCAIGYFGYPECRRCGCDAEGSFTQADGSIACDS-NGQCPCKSLVVGL 1372
            ..|||:||...:||:|||||.|::.||.||.|.|...|:...     .||. .|||.||..|.|.
  Rat  1550 DSGQCRCRPNVAGRRCDTCAPGFYSYPSCRPCDCHEAGTMAS-----VCDPFTGQCHCKENVQGS 1609

  Fly  1373 KCDTCMQSTFGLSAQNPEGCTRCFCFGRSGECEQSDLS-------WGHIRMAESRNLSVQQIRPH 1430
            :||.|...||.|.|.||:|||||||||.:..|..|:.:       .|.:.::..|     |:.||
  Rat  1610 RCDQCRVGTFSLDAANPKGCTRCFCFGATERCGNSNYARHEFMDMEGWVLLSSDR-----QVVPH 1669

  Fly  1431 SVPSSDYEYIVVVQMEGSSFHREDAEIQRMNDLSLVPKSTGNVSIGAYGQFYHPLYFQLPPQFYG 1495
            .                   ||.:.|:... ||.||..:            :..||:|.||.:.|
  Rat  1670 E-------------------HRPEMELLHA-DLRLVADT------------FPELYWQAPPSYLG 1702

  Fly  1496 DRTSSYGGFLYFTLITE----GAHKPLERNILGQYPLVQLHAHSKLLLDFYEYEEFEY-SLNVTH 1555
            ||.|||||.|::.|.:|    ....|.|..     |.|.|..:...:    .:.|..| |....|
  Rat  1703 DRVSSYGGTLHYELHSETRRGDVFIPYESR-----PDVVLQGNQMSI----AFLELAYPSPGQVH 1758

  Fly  1556 R--VPLHESFWKYHHTSQAVDRNTLMAALQNIRHIFIRAFAFADFQEVVLQNVHMDAAIYIKGST 1618
            |  :.|.|..:::..|...|.|..||..|..:..:.|||........|.|:.|.::.|....|..
  Rat  1759 RGQLQLVEGNFRHLETHNPVSREELMMVLAGLEQLQIRALFSQTSSTVSLRRVVLEVASEAGGGP 1823

  Fly  1619 NLIAKGVERCKCPKRFDGLSCQDPGRSFYRWRNTTIVESVFIEDLIGRAAPCHCNGRSSDCDRET 1683
            .  |..||.|.||..:.|.|||:....:||     ..:.:|    :||..||.|:|.|..|...:
  Rat  1824 P--ASNVELCMCPANYRGDSCQECAPGYYR-----DTKGLF----LGRCVPCQCHGHSDRCLPGS 1877

  Fly  1684 GVCQNCRGNTGGDHCHQCAEGFY----GDPNSPHGCQACPCP--ETNRNFARGCNVWDGEVSCVC 1742
            |.|..|:.||.||.|.:|..||.    .||.||  |.:||||  ..:.|||.||.:.:|...|:|
  Rat  1878 GTCVGCQHNTEGDQCERCRPGFVSSDPSDPASP--CVSCPCPLAVPSNNFADGCILRNGRTQCLC 1940

  Fly  1743 KPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDG---------------------------- 1779
            :|||.|..||||..|:||:|: ...::||||:|..:|                            
  Rat  1941 RPGYAGASCERCAPGFFGNPL-VLGSSCQPCDCSGNGDPNMIFSDCDPLTGACRGCLRHTTGPRC 2004

  Fly  1780 ------------------------IQTEGCDVETGRCYCREGVTGLKCD---------------- 1804
                                    ..||.||.:||||.|:.||||.:||                
  Rat  2005 ESCAPGFYGNALLPGNCTRCDCSPCGTETCDPQTGRCLCKAGVTGQRCDHCLEGHFGFEQCQGCH 2069

  Fly  1805 -----------------------------------------------KCQAERHHLVDN------ 1816
                                                           :||..|.|...:      
  Rat  2070 PCACGPAAEGSECNPQTGQCHCRPGTTGPQCLECAPGYWGLPEKGCRRCQCPRGHCDPHTGRCTC 2134

  Fly  1817 -----------------------------GCKICDNCTLLLLDYMELVGNKL------RRGMHNM 1846
                                         .|::||:|.:||||.:|..|..|      .||: |.
  Rat  2135 PPGLSGERCDTCSQQHQVPVPGRPGSHGIHCEVCDHCVVLLLDDLERAGALLPSIREQLRGI-NA 2198

  Fly  1847 DLTGIPAPYR---KLSEYESAYEKWNGRHWDFSQTKRRLQDYDSADILKLEAHAENLKFQSRKAV 1908
            ..|.....:|   .:::.:|......|.|   :||..:||..:...| .|:...|.|..|:    
  Rat  2199 SSTAWARLHRLNASIADLQSKLRSPLGPH---NQTAEQLQTLEQQSI-SLQQDTERLGSQA---- 2255

  Fly  1909 ATIGKREFAIKSMREDAVTQQHSVGLLRSEILQTLSDLHGYGKSAHYLSLPTALKQARFYLQAIR 1973
              .|.::.|.:.:.....|...:..||  ||:|.:|                             
  Rat  2256 --TGVQDQAGRLLDNTESTLVRAQKLL--EIVQAVS----------------------------- 2287

  Fly  1974 EHDQMVQGIRSTNDCAWKHFYAMGNASDASFDE----SGRLE-MLW----RDLNQ----TNHRVV 2025
                     |:.|:.|.:.|  .|||:..|.::    ...:| :||    |||..    ....:.
  Rat  2288 ---------RALNELASQGF--PGNATTPSGEQLRWALAEVERLLWDMRTRDLGAPQAVAEAELA 2341

  Fly  2026 DMRLQVDRVQE------VENEAEDVLEHVRN---------LSIRVGESH-----QELDELNQRIS 2070
            :.:..:.||||      .||:|  :..|:|:         :.:|...:|     :|.||||.|..
  Rat  2342 EAQRLMARVQEQLTSFWEENQA--LATHIRDQLAQYESGLMDLREALNHAVNTTREADELNSRNE 2404

  Fly  2071 DHLDPGY-----LEQGEGLLRLTVQRQIMLNGHLNQLDGYRILLNTTLGVKTEQQREVRKH---- 2126
            :.|....     |.|....|:.|:|...:...|:::|         ..|:  ::.:|..:|    
  Rat  2405 ERLREALQWKQELSQDNATLKATLQAASLTLAHVSEL---------LQGI--DKAKEDLEHLAAS 2458

  Fly  2127 ----WLP-------------------KAEKHASHLLARSNEYARKFQPTRNG------ARIAMLA 2162
                |.|                   .||.||..|    |:.|........|      .:.|:.|
  Rat  2459 LDGAWTPLLKRMQAFSPASSKVDLVEAAEAHAQKL----NQLAINLSGIIQGINQDRFIQRAVEA 2519

  Fly  2163 SSAHSNITEAINDARLASILAKERVYEAQRTLYPSDGSSMIERAKHSLHRSKQLQQEALKQMHKS 2227
            |:|:|:|.:|:..|..|   |...:.:|.||........:...|:..|..|..|.:..|....:.
  Rat  2520 SNAYSSILQAVQAAEDA---AGHALRQASRTWEMVVQRGLAAGARQLLANSSALVETILGHQERL 2581

  Fly  2228 NVLKDKLHRQEQQVEGIKSTIYDSGLRTNNISGQLQGLSDGSARRQAKDSLEM-ADRTGEQM--- 2288
            .:...:|.....|:..:::       :.|.::.|:|         :|:..|.| ...|.|::   
  Rat  2582 GLAHGRLQAAGTQLRDVRA-------KKNQLAAQIQ---------EAQAMLAMDTSETSEKIAHA 2630

  Fly  2289 RAELQKAKD----MQKSIQNMRNSFSNLEPDWEIKLG------------MAQENISLTQTNLRLA 2337
            :|...:|:|    :|..:|.|:   .|:| .|:.:||            .|..::|..:..|...
  Rat  2631 KAVAAEARDTAAHVQSQLQGMQ---KNVE-RWQSQLGGLRGQDLSQAERDASSSVSTLEKTLPQL 2691

  Fly  2338 NVSLSYLEQQAEKEQQVFEVWNNSMA--QQLQQLRDQIAKARHAAEAIDVSLESLGPKCIRSYLP 2400
            ...||:||.:.        |.|.|:|  ..:.::|..||:||.||..:.||::..|...:|...|
  Rat  2692 LAKLSHLENRG--------VHNASLALSANIGRVRKLIAQARSAANKVKVSMKFNGRSGVRLRTP 2748

  Fly  2401 ------ASYGLSTSNKIRMSFALSNHLES---SP----------LIHLASSE--GRHITLELYKR 2444
                  |:|           .||..:::|   :|          ::::.|.:  |.::.:.|..:
  Rat  2749 RDLADLAAY-----------TALKFYIQSPVPAPEPGENTGDRFVLYMGSRQATGDYMGVSLRNQ 2802

  Fly  2445 RVRLVWNL---GGTTATVTHPMVVHTRDPKYDDAWYHVEANRTLNLGSLVVRRMNNY-----GEL 2501
            :|..|:.|   |.||.::         |....:.:..|..:|||..|.:.|....:.     |:.
  Rat  2803 KVHWVYRLGEAGPTTLSI---------DENIGEQFAAVSIDRTLQFGHMSVTVEKHMVHEIKGDT 2858

  Fly  2502 TPP--------NPVIITGSTDTEHTRFYQSRSDRISLGGFAS-----KDLQFTPGLNVVVHQVEV 2553
            ..|        ||         :...||        :||:.|     :.|:| ||....:....:
  Rat  2859 VAPGREGLLNLNP---------DDFVFY--------VGGYPSNFTPPEPLRF-PGYLGCIEMDTL 2905

  Fly  2554 DNKPLGLWNFVTSEGSCGGSMVGAKESSASST--------ARHFNGLGYAQLMKTRPRPTRKNLF 2610
            :.:.:.|:||   |.:...:....|..:.|.|        ..:.:|.|:|::       |.:..|
  Rat  2906 NEEVVSLYNF---EQAFKLTTAVDKPCARSKTTGDPWLTDGSYLDGSGFARI-------TFEKQF 2960

  Fly  2611 S----VQMTFRTLDENALLFLAVDDKNNRSVSVTLSRGRIMFRIDYGDESK-------------- 2657
            |    .:...|.:..|.::|..  .:.|:.:.:.:..|.::...|:|...|              
  Rat  2961 SNTKRFEQELRLVSYNGIIFFL--KQENQFLCLAVQDGTLVLLYDFGSGLKRADPLQPPQALTAA 3023

  Fly  2658 -------LEINTTKKYNVGQWIKIEAAREFSAKRSTENGMLRVNNDRPISGAPTLPVNIHLLPDL 2715
                   |.....|:.    .:::|.|..||..:..|..|                         
  Rat  3024 SKAIQVFLLAGARKRV----LVRVERATVFSVDQDNELEM------------------------- 3059

  Fly  2716 SKTVYYLGGVPPG---------FTSGTSKAPGADNPFLGCMKDVQVNGETYDPLESSSYYGVEPS 2771
             ...||||||||.         |.||.|        ..||:|.::..|: |..|:..:..|:..|
  Rat  3060 -ADAYYLGGVPPEELPPSLRRLFPSGGS--------VRGCIKGIKALGK-YVDLKRLNTTGISFS 3114

  Fly  2772 CKN---MITKAGFSGNGYLELPSQSLRKRSN---TALVFRTLQPDCLLLLAAYPPEILGDYDAKD 2830
            |..   |.....|.|:|:|.|....:...:.   :...||..|.|.||.....|           
  Rat  3115 CTADLLMGRTMTFHGHGFLPLALPDVAPITGEVYSGFGFRGTQDDNLLYYRTSP----------- 3168

  Fly  2831 IKGNFSISLVDGQLHVWVNSGRSFIKMSSNSSQM-NDGEFHVVHLIKTGRKLELMVDDELQEIRN 2894
             .|.:.:||..|  ||.:    .|:.....:.:: .||..|.|.......::.|.|||:||.:::
  Rat  3169 -DGPYQVSLRGG--HVTL----QFMNREVETQRVFADGAPHYVAFYSNVTRVWLYVDDQLQPVKS 3226

  Fly  2895 LNGNPTVVSL-PRDAGGLYIGGAPPHESYTPLAPTFVNLEGAIRDVVFN-----NRTINFNDALT 2953
            ..|...::.| |.:...|.:||       .|::.||.|..|.|.:|...     .|..:.:..:.
  Rat  3227 REGTTPMLQLQPEEPPRLLLGG-------LPMSGTFHNFSGCISNVFVQRLRGPQRVFDLHQNMG 3284

  Fly  2954 FANVQIGRNGPLMGSLKGGLYDVLLKTEPMIGKSFTASPEGCKRIGSYSYEPNAFKFGDDIYSYS 3018
            ..||.:|.. |......|.....:.:......:..|     |..........:|::||....||.
  Rat  3285 SVNVSVGCT-PAQLQTSGATAQKVSRRSRQPSQDLT-----CMTPWLLGTIQDAYQFGGPGPSYL 3343

  Fly  3019 Q-LKLPERHFWQRNFHLSFDFRSFYPNG-----MLYLSPGSKEKPKHYVALVLKDGQLVLVVRGR 3077
            | :.:...|  :...|||...|   |:|     :||::|.|...|.  :.|.|..|:.|....| 
  Rat  3344 QFVGVSPSH--RNRLHLSMLVR---PHGASQGLLLYVAPLSSHSPS--LVLFLNHGRFVAQTEG- 3400

  Fly  3078 RREELQLTAKLND--GEWHRVTISCHDRKVTMSVEIGRTDQKTSAQMKLPKKIGASQ-LLLVGGL 3139
            ...:||..::.:.  |:||||::....::|.:.|:..:|..:.:...::.:..|... .|.||||
  Rat  3401 PGPQLQAQSRQHSRAGQWHRVSVRWGMQQVQLVVDGSQTWSQKAPHRRVHRAEGPQHYTLFVGGL 3465

  Fly  3140 PQSPVKVSSDLYVRLEPFKGCLRRVSINNNTQDLARPGKHSNVGQCFP-TVERGSYFPGDAYAIY 3203
            |..  ..||.|.|.: .|.||::::.::.  :.|..|.:...|..|.. .:|.|.:|||...|: 
  Rat  3466 PAG--SYSSKLPVSV-GFSGCMKKLQLDK--RPLRAPTRMVGVTPCVSGPLEDGLFFPGSEGAV- 3524

  Fly  3204 KKNFNVGK----YLDLETEFRTSELSGILLSVSDPNGFPALSLELHNGNIIFSCDPGNGAPMRVE 3264
              ...:.|    ::.||.|.|....:|::..:...:..|.:.|:|....::...:.|.|     |
  Rat  3525 --TLELPKAKMPHVSLELEVRPLAAAGLIFHLGQAHATPYVQLQLLTEQVLLRANDGAG-----E 3582

  Fly  3265 SSLPTKY-ALCDNKWHNISALYDGEQIVLRIDQLPAVISVGNQGNAGKVQTRSP--LYIGGLPES 3326
            .|....| .|||.:||.::.:.....:.|.:|    ..|....|...:....||  |::|..|:|
  Rat  3583 FSTWVTYPKLCDGQWHQVTVIKGRNTLRLEVD----THSNHTTGRLPETLADSPALLHLGSPPKS 3643

  Fly  3327 ------APSGSLISRENFKGCIR 3343
                  .|:        ::||:|
  Rat  3644 EAAWPEPPA--------YRGCLR 3658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wbNP_723870.1 Laminin_N 164..396 CDD:278484 83/256 (32%)
EGF_Lam 401..450 CDD:238012 23/55 (42%)
TNFRSF <407..507 CDD:304602 49/122 (40%)
EGF_Lam 505..552 CDD:238012 17/68 (25%)
Laminin_EGF 550..597 CDD:278482 17/51 (33%)
Laminin_B 660..798 CDD:278481 8/137 (6%)
EGF_Lam 851..900 CDD:238012 17/49 (35%)
Laminin_EGF <943..971 CDD:278482 11/27 (41%)
VSP 953..1414 CDD:146106 187/1008 (19%)
Laminin_EGF 974..1018 CDD:278482 23/99 (23%)
EGF_Lam 1017..1065 CDD:238012 14/52 (27%)
Laminin_EGF 1065..>1105 CDD:278482 17/63 (27%)
EGF_Lam 1150..1197 CDD:238012 19/296 (6%)
Laminin_EGF 1199..1247 CDD:278482 17/47 (36%)
EGF_Lam 1247..1292 CDD:238012 15/44 (34%)
Laminin_EGF 1294..1342 CDD:278482 22/50 (44%)
Laminin_EGF 1340..1392 CDD:278482 21/52 (40%)
Laminin_B 1486..1611 CDD:278481 39/131 (30%)
EGF_Lam 1669..1716 CDD:238012 21/50 (42%)
Laminin_EGF 1718..1767 CDD:278482 24/50 (48%)
EGF_Lam 1772..1819 CDD:238012 23/196 (12%)
CrfC <1933..2267 CDD:223771 81/404 (20%)
Laminin_II 2277..2400 CDD:283628 37/144 (26%)
LamG 2399..>2492 CDD:304605 22/116 (19%)
Laminin_G_2 2616..2755 CDD:280389 31/168 (18%)
Laminin_G_2 2804..2944 CDD:280389 37/146 (25%)
Laminin_G_2 3038..3169 CDD:280389 37/138 (27%)
LamG 3192..3347 CDD:238058 38/165 (23%)
Lama5NP_001178538.1 Laminin_N 58..302 CDD:278484 83/260 (32%)
EGF_Lam 303..351 CDD:238012 23/47 (49%)
EGF_Lam 362..425 CDD:238012 25/62 (40%)
EGF_Lam 432..473 CDD:238012 15/40 (38%)
EGF_Lam 499..546 CDD:214543 18/54 (33%)
EGF_Lam 545..588 CDD:238012 21/246 (9%)
Laminin_EGF 592..639 CDD:278482 19/54 (35%)
Laminin_EGF 637..684 CDD:278482 20/73 (27%)
EGF_Lam 681..723 CDD:238012 7/41 (17%)
EGF_Lam 780..831 CDD:238012 13/50 (26%)
EGF_Lam 832..>871 CDD:238012 17/39 (44%)
Laminin_EGF 1442..1490 CDD:278482 19/52 (37%)
Laminin_EGF 1532..1583 CDD:278482 22/50 (44%)
Laminin_EGF 1581..1629 CDD:278482 21/52 (40%)
LamB 1689..1818 CDD:214597 41/137 (30%)
EGF_Lam 1863..>1899 CDD:238012 15/35 (43%)
Laminin_EGF 1914..1967 CDD:278482 24/53 (45%)
EGF_Lam 1969..2022 CDD:238012 4/52 (8%)
EGF_Lam 2024..2068 CDD:214543 15/43 (35%)
EGF_Lam 2070..2116 CDD:238012 0/45 (0%)
EGF_Lam 2118..2168 CDD:214543 5/49 (10%)
Laminin_I 2189..2448 CDD:283627 66/324 (20%)
MscS_porin 2397..2617 CDD:289559 50/253 (20%)
Laminin_II 2639..2760 CDD:283628 34/143 (24%)
LamG 2781..2908 CDD:214598 29/153 (19%)
LamG 2943..3095 CDD:238058 37/198 (19%)
LamG 3151..3269 CDD:214598 37/142 (26%)
LamG 3338..3490 CDD:238058 44/162 (27%)
LamG 3514..3663 CDD:238058 38/165 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9135
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100395
Panther 1 1.100 - - LDO PTHR10574
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.910

Return to query results.
Submit another query.