DRSC/TRiP Functional Genomics Resources

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Protein Alignment wb and LOC1275280

DIOPT Version :10

Sequence 1:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster
Sequence 2:XP_314518.4 Gene:LOC1275280 / 1275280 VectorBaseID:AGAMI1_006197 Length:385 Species:Anopheles gambiae


Alignment Length:364 Identity:92/364 - (25%)
Similarity:146/364 - (40%) Gaps:88/364 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   524 CNCLEGFQGK--NCEECAPGYYGDDCKRCECDERGSL---GSTGSCSGVCQCKL----NVEGSTC 579
            ||.:..|.|:  :...|.|.|....|...:.::.|..   |..||...  |.:|    ||:.:..
Mosquito    63 CNPVWYFNGRPVSKSRCIPSYGELVCPSVKREDAGRYDLWGGDGSRHS--QARLIFSANVQVTRA 125

  Fly   580 SEC-------------APGYFDLS--AENAEGCTSCWCSGVSQTCHSAKLQTLAFETLNDWKITD 629
            .|.             .|.:|:..  .||     .|:||||::.|.      :|.:.....|..|
Mosquito   126 VERDLPKERIAKVQDEPPPFFERKNRVEN-----DCFCSGVTERCR------MALDLYRMRKTYD 179

  Fly   630 IQRVKPISIPVDAETNRLIFANELDEVEAIYWQASLG-YLGNRLTSYGSRLQLVLSWDVIRGDRS 693
            :..:..:.:..::.             .|.|.:..|. .|||.:|:||..::..::.:... |||
Mosquito   180 LSNLTAVRLGGESS-------------GAKYIRIPLSVLLGNLITAYGGYMRFPVTEECYT-DRS 230

  Fly   694 GKPTTGPNVILVGKNGLKIAFG-------DESLDGLGINLNVTLTEVGWYHVPPTVVDIKTRLRR 751
                 .|.|::|.|..:..|.|       |:.      .:.|.|.|..|..:|  .:|   .|..
Mosquito   231 -----KPCVVMVDKRNMHRAVGYFLPTSHDQR------QVQVLLKESNWKLLP--AID---ELSD 279

  Fly   752 TEGGDYHGESVTRSQFLSVLVSLDAVLIRAAFHTDQGET--SLERAVIYSGGVELGGKSSSQVEQ 814
            .:.||    .:|:..|:|.|.::.:|.||..:.|...|.  |::.|..|..|  ||  :.:.||:
Mosquito   280 RDSGD----ELTKFIFMSTLSNIHSVYIRGRYRTRSEENILSIDMASSYDEG--LG--TVTTVEE 336

  Fly   815 CLCPAGYTGLSCEGCAFGFKRIYENTSDHQILSKCIPCP 853
            |.|..||.|||||.|..|:.|.|::.|...|   |:..|
Mosquito   337 CDCHPGYGGLSCERCEKGYLRTYDSISPEGI---CLSIP 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wbNP_723870.1 Laminin_N 153..398 CDD:459653
EGF_Lam 401..450 CDD:238012
EGF_Lam 505..552 CDD:238012 8/29 (28%)
Laminin_EGF 550..597 CDD:395007 13/68 (19%)
Laminin_B 660..813 CDD:459652 42/162 (26%)
EGF_Lam 851..900 CDD:238012 1/3 (33%)
Laminin_EGF <943..971 CDD:395007
Laminin_EGF 974..1018 CDD:395007
EGF_Lam 1017..1065 CDD:238012
Laminin_EGF 1065..>1105 CDD:395007
EGF_Lam 1150..1197 CDD:238012
Laminin_EGF 1199..1247 CDD:395007
EGF_Lam 1247..1292 CDD:238012
Laminin_EGF 1294..1342 CDD:395007
Laminin_EGF 1340..1392 CDD:395007
Laminin_B 1486..1626 CDD:459652
EGF_Lam 1669..1716 CDD:238012
Laminin_EGF 1718..1767 CDD:395007
EGF_Lam 1772..1819 CDD:238012
YhaN <1907..2141 CDD:443752
SMC_prok_B <2123..>2390 CDD:274008
Laminin_II 2279..2400 CDD:368703
LamG 2399..>2492 CDD:473984
LamG 2586..2753 CDD:238058
Laminin_G_2 2804..2944 CDD:460494
LamG 3018..3167 CDD:238058
LamG 3192..3347 CDD:238058
LOC1275280XP_314518.4 None
Blue background indicates that the domain is not in the aligned region.

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