Sequence 1: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_446418.1 | Gene: | Lamc1 / 117036 | RGDID: | 621052 | Length: | 1607 | Species: | Rattus norvegicus |
Alignment Length: | 2225 | Identity: | 498/2225 - (22%) |
---|---|---|---|
Similarity: | 789/2225 - (35%) | Gaps: | 757/2225 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 155 PPLFNVVPRAQISVNATCGQNGAEEYCKQVG----AKPCGICNAHSSDRAKQRSIQSLISSGSGS 215
Fly 216 GSGSGF--------EEGWWQSPTLQGGRQF-EYVTILLDLKQTFQIFSVWLKSANSPRPASWILE 271
Fly 272 KSL--DGINFEPW---QYFGLSDADCQRRWNLSGQNGKYVFQNDTEIICSTQFSKPGPLENGVLH 331
Fly 332 ASLLKNRPGA--TDQSPELMKFITTRYIRIRLQGMHSTANQDNSL-DWLLDSPSLEKHSFYSLSQ 393
Fly 394 LKVSARLDCNGHANRSHESPDDPLMQCICQHNTCGAQCEQCCPLFQDRPY-----QMGGECEICQ 453
Fly 454 CYGHAESCTYDPFLDK-----GICQSCSNNTAGIECEFCEMGFYRELDAPLTDPCLPCSCNPARS 513
Fly 514 TGGCQSDGGSCNCLEGFQGKNCEECAPGYYG---DDCKRCECDERGSLGSTGSCSGVCQCKLNVE 575
Fly 576 GSTCSECAPGYFDLSAENAEGCTSCWCSGVSQTCHSAKLQTL-----AFETLND-WKITDIQRVK 634
Fly 635 PISIPVDAETNRLIFANELDEVEAI-------YWQASLGYLGNRLTSYGSRLQLVLSWDVIRGDR 692
Fly 693 SGKPTTGPNVILVGKNGLKIAFGDESLDGLGINLNVTLTEVGWYHVPPTVVDIKTRLRRTEGGDY 757
Fly 758 HGE-SVTRSQFLSVLVSLDAVLIRAAFHTDQGETSLERAVIYSGGVEL------GGKSSSQVEQC 815
Fly 816 LCPAGYTGLSCEGCAFGFKRIYENTSDHQILSKCIPCPCNGHSNSCDLQSGNCGDCMHNTFGDRC 880
Fly 881 ERCQLGYYGNPLQGTPNDCKRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCP 945
Fly 946 EGYTGDHCQVCDDGYFGNP---RQPGSSCQRCDC-------AGGPCNVTTGECITCRGNTEGWHC 1000
Fly 1001 ERCKLGYWGDPAVGCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKCDECDVGYANVELRCPSC 1065
Fly 1066 NCDPLGSLVQDRCDPHTGQCHCKEGVMGAKCHECQDGYFGMNAVAYRMDDLAALRQNSDSDDDEW 1130
Fly 1131 ELVPDTEDPNSESTVACEECHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEG 1195
Fly 1196 CRDCRCDPHGSRGHECNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQVCDPH 1260
Fly 1261 NGRCICPKFTRGLGCGQCVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQCQCREGYSGRKCD 1325
Fly 1326 TCAIGYF---GYPECRRCGCDAEGSFTQADGSIACDSNGQCPCKSLVVGLKCDTCMQSTFGLSAQ 1387
Fly 1388 NPEGCTRCFCFGRSGECEQSDLSWGHIRMAESRNLSVQQIRPHSVPSSDYEYIVVVQMEGSSFHR 1452
Fly 1453 EDAEIQRMNDLSLVPKSTGNVSIGAYGQFYHPLYFQLPPQFYGDRTSSYGGFLYFTLITEGAHKP 1517
Fly 1518 LERNILGQYPLVQLHAHSKLLLDFYEYEEFEYSL-NVTHRV--PLHESFWKYHHTSQAVDRNTLM 1579
Fly 1580 AALQNIRHIFIRAFAFADFQEVVLQNVHMDAAIYIKGSTNLIAKGVERCKCPKRFDGLSCQDPGR 1644
Fly 1645 SFYRWRNTTIVESVFIEDLIGRAAPCHCNGRSSDCDRETGVCQNCRGNTGGDHCHQCAEGFYGDP 1709
Fly 1710 NSPHGCQACPCPETNRNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCN 1774
Fly 1775 CHPDGIQTEGCDVETGRCYCREGVTGLKCDKCQAERHHL--VDNGCKICDNCTLLLLDYMELVGN 1837
Fly 1838 KLRRGMHNMD-LTGIPAPYRKLSEYESAYEKWNGRHWDFSQTKRRLQ----DYDSADILKLEAHA 1897
Fly 1898 ENLKFQSRKAVATIGKREFAIKSMREDAVTQQHSVGLLRSEILQTLSDLHGYGKSAHYLSLPTAL 1962
Fly 1963 KQARFYLQAIREHDQMVQGIRSTNDCAWKHFYAMGNASDASFDESGRLEMLWRDLNQTNHRVVDM 2027
Fly 2028 RLQVDRVQEVENEAEDVLEHVRNLSIRVGESHQELDELNQRISDHLDPGYLEQGEGLLRLTVQRQ 2092
Fly 2093 IMLNGHLNQLDGYRILLNTTLGVKTEQQREVRKHWLPKAEKHASHLLARSNEYARKFQPTRNGAR 2157
Fly 2158 IAMLASSAHSNITEAINDARLASILAKERVYEAQRTLYPSDGSSMIERAKHSLHRSKQLQQEALK 2222
Fly 2223 QMHKSNVLKDKLHRQEQQVEGIKSTIYDSGLRTNNISGQLQGLSDGSARRQAKDSLEMADRTGEQ 2287
Fly 2288 MRAELQKAKDMQKSI 2302 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | 69/252 (27%) |
EGF_Lam | 401..450 | CDD:238012 | 20/53 (38%) | ||
TNFRSF | <407..507 | CDD:304602 | 37/109 (34%) | ||
EGF_Lam | 505..552 | CDD:238012 | 16/49 (33%) | ||
Laminin_EGF | 550..597 | CDD:278482 | 20/46 (43%) | ||
Laminin_B | 660..798 | CDD:278481 | 33/138 (24%) | ||
EGF_Lam | 851..900 | CDD:238012 | 25/48 (52%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 14/30 (47%) | ||
VSP | 953..1414 | CDD:146106 | 106/473 (22%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 21/50 (42%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 2/47 (4%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 5/39 (13%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | 19/46 (41%) | ||
Laminin_EGF | 1199..1247 | CDD:278482 | 20/47 (43%) | ||
EGF_Lam | 1247..1292 | CDD:238012 | 1/44 (2%) | ||
Laminin_EGF | 1294..1342 | CDD:278482 | 22/50 (44%) | ||
Laminin_EGF | 1340..1392 | CDD:278482 | 2/51 (4%) | ||
Laminin_B | 1486..1611 | CDD:278481 | 21/127 (17%) | ||
EGF_Lam | 1669..1716 | CDD:238012 | 5/46 (11%) | ||
Laminin_EGF | 1718..1767 | CDD:278482 | 4/48 (8%) | ||
EGF_Lam | 1772..1819 | CDD:238012 | 7/48 (15%) | ||
CrfC | <1933..2267 | CDD:223771 | 53/333 (16%) | ||
Laminin_II | 2277..2400 | CDD:283628 | 5/26 (19%) | ||
LamG | 2399..>2492 | CDD:304605 | |||
Laminin_G_2 | 2616..2755 | CDD:280389 | |||
Laminin_G_2 | 2804..2944 | CDD:280389 | |||
Laminin_G_2 | 3038..3169 | CDD:280389 | |||
LamG | 3192..3347 | CDD:238058 | |||
Lamc1 | NP_446418.1 | LamNT | 42..282 | CDD:214532 | 72/263 (27%) |
EGF_Lam | 283..328 | CDD:238012 | 21/45 (47%) | ||
Laminin_EGF | 340..394 | CDD:278482 | 19/56 (34%) | ||
Laminin_EGF | 396..443 | CDD:278482 | 14/46 (30%) | ||
Laminin_EGF | 443..490 | CDD:278482 | 20/46 (43%) | ||
LamB | 552..676 | CDD:214597 | 36/153 (24%) | ||
Laminin_EGF | 722..761 | CDD:278482 | 22/39 (56%) | ||
EGF_Lam | 770..818 | CDD:238012 | 21/67 (31%) | ||
Laminin_EGF | 826..873 | CDD:278482 | 21/88 (24%) | ||
Laminin_EGF | 882..930 | CDD:278482 | 23/130 (18%) | ||
EGF_Lam | 933..978 | CDD:214543 | 20/91 (22%) | ||
EGF_Lam | 980..1027 | CDD:238012 | 21/47 (45%) | ||
FlgN | <1048..1121 | CDD:298847 | 19/139 (14%) | ||
MA | 1089..1300 | CDD:214599 | 42/318 (13%) | ||
Tropomyosin | 1355..1586 | CDD:278679 | 59/363 (16%) | ||
Prefoldin | 1416..1551 | CDD:298833 | 36/223 (16%) | ||
SPX | <1518..1588 | CDD:271919 | 15/86 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |