DRSC/TRiP Functional Genomics Resources

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Protein Alignment wb and LOC100494394

DIOPT Version :10

Sequence 1:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster
Sequence 2:XP_002938270.2 Gene:LOC100494394 / 100494394 XenbaseID:XB-GENE-29082163 Length:643 Species:Xenopus tropicalis


Alignment Length:494 Identity:136/494 - (27%)
Similarity:210/494 - (42%) Gaps:107/494 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 GAGGGALRLLKTEDVYSSSFSGGLYPPLFNVVPRAQISVNATCGQNGAEEYCKQVGAKP------ 188
            ||....|..|:.|. :|.:      ||:.|:.........:|||:|..|.:|......|      
 Frog    21 GADSATLYPLRCEG-HSCN------PPVVNLAAGRTPLTLSTCGKNITETFCSYPEQPPSEQVPS 78

  Fly   189 -CG--ICNAHSSDRAKQRSIQSLISSGSGSGSGSGFEEGWWQSPTLQGGRQFEYVTI----LLDL 246
             ||  .|:..|.::.|.....|.::....|...:     ||||   :.|.|.|.:.:    ::.|
 Frog    79 YCGQPKCDKCSVNQLKNSHPPSYMTDDVFSKPAT-----WWQS---EQGIQREEIRLDFGTVVYL 135

  Fly   247 KQTFQIFSVWLKSANSPRPASWILEKSLD-GINFEPWQYFGLSDADCQRRWNLSGQNGKYVFQND 310
            .....:|       .|||||:.|||:|.| |.|:.|::||.   .:|...:.|         |:|
 Frog   136 THVIMVF-------KSPRPAAMILERSHDNGKNWRPYKYFA---TNCTATFGL---------QDD 181

  Fly   311 TE---IICSTQFSKPGPLENG--VLHASLLKNR--PGATDQSPELMKFITTRYIRIRLQGMHSTA 368
            ..   .:|::::|...|...|  :..|....||  ...:.|:.:|:|....|.:.::.|.....|
 Frog   182 LAEEGTLCTSRYSSAWPCTRGEVIFRALTPANRIEDPYSPQAQDLLKITNLRLLLLKRQECPCLA 246

  Fly   369 NQDNSLDWLLDSPSLEK-HSF--YSLSQLKVSARLDCNGHA------NRSHESPDDPLMQCICQH 424
            ..:          |.|| |.|  |::..|.|.....|||||      ..:|.:......:|:|||
 Frog   247 VPE----------SREKPHWFAHYAIYDLIVRGSCFCNGHAEHCQQVTHTHGAQTVVHGKCVCQH 301

  Fly   425 NTCGAQCEQCCPLFQDRPYQMG-------GECEICQCYGHAESCTYDPFL-------DKGICQSC 475
            ||.|..||:|.||:.|:|::.|       .||:.|:|:.||.||.:|..:       ..|:|::|
 Frog   302 NTAGDHCERCAPLYNDQPWRPGDGKTGAPNECKRCRCHNHAHSCHFDLSVWLSSGRTSGGVCENC 366

  Fly   476 SNNTAGIECEFCEMGFYRELDAPLTDP--CLPCSCNPARSTGG----------CQSDGGSCNCLE 528
            .::|.|..|:.|:.|:||:...|:..|  |..|.|:   |||.          |....|.|.|..
 Frog   367 QHHTEGDRCQRCQPGYYRDPKEPMASPAACKECFCH---STGSAPFALNGSWKCHPRTGFCYCKP 428

  Fly   529 GFQGKNCEECAPGYYG---DDCKRCECDERGSLGSTGSC 564
            |..|..|:.|..|::|   ..|:.|:|..... ..||.|
 Frog   429 GVAGPYCDACRRGFWGFSERGCRPCDCASHCD-PHTGKC 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wbNP_723870.1 Laminin_N 153..398 CDD:459653 66/268 (25%)
EGF_Lam 401..450 CDD:238012 22/61 (36%)
EGF_Lam 505..552 CDD:238012 17/59 (29%)
Laminin_EGF 550..597 CDD:395007 5/15 (33%)
Laminin_B 660..813 CDD:459652
EGF_Lam 851..900 CDD:238012
Laminin_EGF <943..971 CDD:395007
Laminin_EGF 974..1018 CDD:395007
EGF_Lam 1017..1065 CDD:238012
Laminin_EGF 1065..>1105 CDD:395007
EGF_Lam 1150..1197 CDD:238012
Laminin_EGF 1199..1247 CDD:395007
EGF_Lam 1247..1292 CDD:238012
Laminin_EGF 1294..1342 CDD:395007
Laminin_EGF 1340..1392 CDD:395007
Laminin_B 1486..1626 CDD:459652
EGF_Lam 1669..1716 CDD:238012
Laminin_EGF 1718..1767 CDD:395007
EGF_Lam 1772..1819 CDD:238012
YhaN <1907..2141 CDD:443752
SMC_prok_B <2123..>2390 CDD:274008
Laminin_II 2279..2400 CDD:368703
LamG 2399..>2492 CDD:473984
LamG 2586..2753 CDD:238058
Laminin_G_2 2804..2944 CDD:460494
LamG 3018..3167 CDD:238058
LamG 3192..3347 CDD:238058
LOC100494394XP_002938270.2 Laminin_N 37..269 CDD:459653 66/274 (24%)
EGF_Lam 270..324 CDD:238012 20/53 (38%)
EGF_Lam 335..389 CDD:238012 17/53 (32%)
EGF_Lam 399..450 CDD:214543 15/53 (28%)
NTR_like 529..636 CDD:470599
Blue background indicates that the domain is not in the aligned region.

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