DRSC/TRiP Functional Genomics Resources

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Protein Alignment wb and ntng2

DIOPT Version :10

Sequence 1:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster
Sequence 2:XP_004916725.1 Gene:ntng2 / 100489740 XenbaseID:XB-GENE-6032766 Length:659 Species:Xenopus tropicalis


Alignment Length:635 Identity:130/635 - (20%)
Similarity:202/635 - (31%) Gaps:250/635 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 TCGQNGAEEYCKQVGAKPCG-ICNAHSSDRAKQRSIQSLISSGSGSGSGSGFE---EG---WWQS 228
            ||| |..|.:|.......|. .|:|.:.|.|...|:.              |:   ||   :|||
 Frog    60 TCG-NPPERFCTHENPYLCSDECDASNPDLAHPPSLM--------------FDKEKEGLATYWQS 109

  Fly   229 PTLQGGRQFEYVTILLDLKQTFQIFSVWLKSANSPRPASWILEKSLD-GINFEPWQYFGLSDADC 292
            .|.:...:.....|.|...::.::....:.:....||.:.:|||||| |..:.|:||:.   .||
 Frog   110 VTWKRYPEPLVANITLSWNKSLELTDDIVVTFEYGRPTAMMLEKSLDYGRTWHPYQYYA---DDC 171

  Fly   293 QRRWNLSGQNGK-YVFQNDTEIICSTQFSK---------------------PGP----LENGVLH 331
            ...:.:..:..: ....:...::|:.::|:                     .||    :||..|.
 Frog   172 MEAFGMPPRKVRDLAASSANRVLCTEEYSRWAGSKKEKDVRFEVRDRFAIFAGPDLRKMENLYLR 236

  Fly   332 ASLLKNRPGATDQSPELMKFITTRYIRIRL--QGMHSTANQDNSLDWLLDSPSLEKHSFYSLSQL 394
            ....|.          |..|.|...:|:||  ..:..|         .:...:|.|: ||::|..
 Frog   237 MESAKG----------LKDFFTLTDLRLRLLRPALGGT---------YVQRENLYKY-FYAISNF 281

  Fly   395 KVSARLDCNGHANRSHESPDDPLMQCICQHNTCGAQCEQCCPLFQDRPYQMGG------------ 447
            :|.||..||.|||..:..  |..:||.|:|||.|..|.:|...|:.:.::.|.            
 Frog   282 EVVARCKCNLHANACNFR--DGALQCECEHNTTGQDCGRCKKNFRSKSWRSGSYTPTPNGSPNAC 344

  Fly   448 -----------------------------------------------------------ECEI-- 451
                                                                       |..:  
 Frog   345 AAAGTAFGTVDPILERTDLPIIPEYTENKRVVQMSLTPPVLDQKPKLPEKIQAAPPVLRELAVTP 409

  Fly   452 ----------------------------------------------------------------- 451
                                                                             
 Frog   410 ASGKKQTKTVPSPVNRQMTTTPASSKKQTKTAAPSISRELPLPPASGKKHTKTAAPKSSIPLEPS 474

  Fly   452 --------------CQCYGHAESCTYDPFLDKGICQSCSNNTAGIECEFCEMGFYRELDAPLTDP 502
                          |:||||:..|:|..||:...|.||.:||.|..|:.|.:|:||.:.|.|.|.
 Frog   475 TVKVSETLGKSVTDCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRNVSAELDDE 539

  Fly   503 --CLPCSCNPARSTGGCQSDGGSCNCLEGFQGKNCEECAPGY-YGDDCKRCECDERGSLGSTGSC 564
              |:.|:||...|.....::.|.|.|.:|.....|:||.||| :...|:...|||...:...|  
 Frog   540 NVCIECNCNQLGSLHDRCNETGYCECRKGSISPKCDECLPGYHWRQGCQPNVCDEELLICQNG-- 602

  Fly   565 SGVCQCKLNVEGSTCSECAPGYFDLSAENAEG--CTSCWCSGVSQTCHSA 612
             |.|.     :|..|. |..|:        :|  |....|....:.|.|:
 Frog   603 -GTCH-----QGQRCI-CPTGF--------KGALCQDVKCDSSHRNCDSS 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wbNP_723870.1 Laminin_N 153..398 CDD:459653 56/262 (21%)
EGF_Lam 401..450 CDD:238012 18/119 (15%)
EGF_Lam 505..552 CDD:238012 15/47 (32%)
Laminin_EGF 550..597 CDD:395007 11/48 (23%)
Laminin_B 660..813 CDD:459652
EGF_Lam 851..900 CDD:238012
Laminin_EGF <943..971 CDD:395007
Laminin_EGF 974..1018 CDD:395007
EGF_Lam 1017..1065 CDD:238012
Laminin_EGF 1065..>1105 CDD:395007
EGF_Lam 1150..1197 CDD:238012
Laminin_EGF 1199..1247 CDD:395007
EGF_Lam 1247..1292 CDD:238012
Laminin_EGF 1294..1342 CDD:395007
Laminin_EGF 1340..1392 CDD:395007
Laminin_B 1486..1626 CDD:459652
EGF_Lam 1669..1716 CDD:238012
Laminin_EGF 1718..1767 CDD:395007
EGF_Lam 1772..1819 CDD:238012
YhaN <1907..2141 CDD:443752
SMC_prok_B <2123..>2390 CDD:274008
Laminin_II 2279..2400 CDD:368703
LamG 2399..>2492 CDD:473984
LamG 2586..2753 CDD:238058
Laminin_G_2 2804..2944 CDD:460494
LamG 3018..3167 CDD:238058
LamG 3192..3347 CDD:238058
ntng2XP_004916725.1 Laminin_N 60..283 CDD:470680 55/260 (21%)
EGF_Lam 286..>323 CDD:238012 16/38 (42%)
EGF_Lam 489..531 CDD:238012 19/41 (46%)
Laminin_EGF 545..592 CDD:395007 15/46 (33%)
Blue background indicates that the domain is not in the aligned region.

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