Sequence 1: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002936983.2 | Gene: | lama4 / 100489161 | XenbaseID: | XB-GENE-1004770 | Length: | 1913 | Species: | Xenopus tropicalis |
Alignment Length: | 2769 | Identity: | 557/2769 - (20%) |
---|---|---|---|
Similarity: | 891/2769 - (32%) | Gaps: | 1070/2769 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 767 FLSVLVSL-------DAVLIRAAFHTD-QGETSLERAVIYSGGVELGGKSSSQVEQCLCPAGYTG 823
Fly 824 LSCEGCAFGFKRIYENTSDHQILSKCIPCPCNGHSNSCDLQSGNCGDCMHNTFGDRCERCQLGYY 888
Fly 889 GNPLQGTPNDCKRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHC 953
Fly 954 QVCDDGYFGNPRQPGSSCQRCDCAGG--------PCNVTTGECITCRGNTEGWHCERCKLGYWGD 1010
Fly 1011 PAVGCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKCDECDVGYANVELRCPSCNCDPLGSLVQ 1075
Fly 1076 DRCDPHTGQCHCKEGVMGAKCHECQDGYFGMNAVAYRMDDLAALRQNSDSDDDEWELVPDTEDPN 1140
Fly 1141 SESTVACEECHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHG 1205
Fly 1206 SRGHECNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQVCDPHNGRCICPKFT 1270
Fly 1271 RGLGCGQCVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQCQCREGYSGRKCDTCAIGYFGYP 1335
Fly 1336 ECRRCGCDAEGSFTQADGSIACDSNGQCPCKSLVVGLKCDTCMQSTFGLSAQNPEGCTRCFCFGR 1400
Fly 1401 SGECEQSDLSWGHIRMAESRNLSVQQIRPHSVPSSDYEYIVVVQMEGSSFHREDAEIQRMNDLSL 1465
Fly 1466 V------PKSTG-NVSIGAYGQFYHPLYFQLPPQFYGDRTSSYGGFLYFTLITEGAHKPLERNIL 1523
Fly 1524 GQYPLVQLHAHSKLLLDFYEYEEFEYSLNVTHRVPLHESFWKYHHTSQAVDRNTLMAALQNIRHI 1588
Fly 1589 FIRAFAFADFQEVVLQNVHMDAAIYIKGSTNLIAKGVERCKCPKRFDGLSCQDPGRSFYRWRNTT 1653
Fly 1654 IVESVFIEDLIGRAAPCHCNGRSSDCDRETGVCQNCRGNTG---GDHCHQCAEGFYGDPNSPHGC 1715
Fly 1716 QACPCPETNRNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGI 1780
Fly 1781 QTEGCDVETGRCYCREGVTGLKCDKCQAERHHLVDNGCKICDNCTLLLLDYMELVGNKLRRGMHN 1845
Fly 1846 MDLTGIPAPYRKLSEYESAYEKWNGRHWDFSQTKRRLQ-DYDSADILKLEAHAENLKFQSRKAVA 1909
Fly 1910 TIGKREFAIKSMRE-DAVTQ--------QHSVGLLRSEILQTLSDLHGYGKSAHYLSLPTALKQA 1965
Fly 1966 RFYLQAIREHDQMVQGIRSTNDCAWKHFYAMGNASDASFDESGRLEMLWRDLNQT--NHRVVDMR 2028
Fly 2029 LQVDRVQEVE--NEAEDVLEHVRNLSIRVGESH---QELDELNQRISDH---LDPGYL---EQGE 2082
Fly 2083 GLLR-------------LTVQRQIM-LNGHLNQLDGYRILLNTTLGVKTEQQREVRKHWLPKAEK 2133
Fly 2134 HASHLLARSNEYARKFQPTRNGARIAMLASSAHS---NITEAINDARLASILAKERVYEAQRTLY 2195
Fly 2196 PSDGSSMIERAKHSLHRSKQLQQEALKQMHKSNVLKDKLHRQEQQVEGIKSTIYDSGLRTNNISG 2260
Fly 2261 QLQGLSDGSARRQA-KDSLEMA-----DRTGEQMRAELQKAK-DMQKSIQNMRNSFSNLEPDWEI 2318
Fly 2319 KLGMAQENISLTQTNLRLANVSLSYLEQQAEKEQQVFEV--------------W-NNSMAQQLQQ 2368
Fly 2369 LRDQIAKARHAAEAIDVSLESLGPKCIRSYLPASYGLSTSNKIRMSFALSNHLESSPLIHL---- 2429
Fly 2430 ---------ASSEGRHITLELYKRRVRLVWNLGGTTATVTHPMVVHTRDPKYDDAW--YHVEANR 2483
Fly 2484 TLNLGSLV-VRRMNNYGE--LTPPNPVIITGSTDTEHTRFYQ-----SRSDRISL---------- 2530
Fly 2531 ---GGF---ASKDLQFTPGLNVVVHQVEVDNKPLGLWNF-------VTSEGSCGGSMVGAKESSA 2582
Fly 2583 SSTARHFNGLGYAQL--MKTRPRPTRKNLFSVQMTFRTLDENALLFLAVDDKNNRSVSVTLSRGR 2645
Fly 2646 IMFRIDYG---DESKLEINTTKKYNVGQWIKIEAAR--EFSAKRSTENGMLRVNNDRPISGAPTL 2705
Fly 2706 PVNIHLLPDLSKTV-----YYLGGVPPGFTSGTSKAPGADNPFLGCMKDVQVNGETYDPLESSSY 2765
Fly 2766 YGVEPSCKN---MITKAGFSGNGYLELPSQSLRKRSN--TALVFRTLQPDCLLLLAAYPPEILGD 2825
Fly 2826 YDAKDIKGNFSISLVDGQLHVWVNSGRSFIKMSSNSSQMNDGEFHVVHLIKTGRKLELMVDDELQ 2890
Fly 2891 EIRNLNGNPTVVSLPRDAGGLYIGGAPPHESYTPLAPTFVNLEGAIRDVVFN--NRTINFNDALT 2953
Fly 2954 FA-NVQ---------------IGRNGPLMGSLKGGL-----YDVLLKTEPMIGKSFTASPEGCKR 2997
Fly 2998 IGSYSYEPNAFKFGDDIYSYSQLKLPERHF------WQRNFHLSFDFRSFYPNGMLYLSPGSKEK 3056
Fly 3057 PKHYVALVLKDGQLVLVV-RGRRREELQLTAKLNDGEWHRVTISCHDRKVTMSVEIGRTDQKTSA 3120
Fly 3121 QMKLPKKIGASQLLLVGGLPQSPVKVSSDLYVR-LEPFKGCLRRVSINNNTQDLARPGKHSNVGQ 3184
Fly 3185 CFP-TVERGSYFPGD-AYAIYKKNFNVGKYLDLETEFRTSELSGILLSVSDPNGFPALSLELHNG 3247
Fly 3248 NIIFSCDPGNGAPMRVESSLPTKYALCDNKWHNISALYDGEQIVLRIDQLPAVISVGNQGNAGKV 3312
Fly 3313 QTRSPLYIGGLPESAPSGSLISRENFKGCIRHVSIRNER 3351 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | |
EGF_Lam | 401..450 | CDD:238012 | |||
TNFRSF | <407..507 | CDD:304602 | |||
EGF_Lam | 505..552 | CDD:238012 | |||
Laminin_EGF | 550..597 | CDD:278482 | |||
Laminin_B | 660..798 | CDD:278481 | 11/38 (29%) | ||
EGF_Lam | 851..900 | CDD:238012 | 23/48 (48%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 12/27 (44%) | ||
VSP | 953..1414 | CDD:146106 | 87/468 (19%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 23/51 (45%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 5/47 (11%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 14/39 (36%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | 18/46 (39%) | ||
Laminin_EGF | 1199..1247 | CDD:278482 | 2/47 (4%) | ||
EGF_Lam | 1247..1292 | CDD:238012 | 1/44 (2%) | ||
Laminin_EGF | 1294..1342 | CDD:278482 | 6/47 (13%) | ||
Laminin_EGF | 1340..1392 | CDD:278482 | 0/51 (0%) | ||
Laminin_B | 1486..1611 | CDD:278481 | 14/124 (11%) | ||
EGF_Lam | 1669..1716 | CDD:238012 | 4/49 (8%) | ||
Laminin_EGF | 1718..1767 | CDD:278482 | 6/48 (13%) | ||
EGF_Lam | 1772..1819 | CDD:238012 | 4/46 (9%) | ||
CrfC | <1933..2267 | CDD:223771 | 74/363 (20%) | ||
Laminin_II | 2277..2400 | CDD:283628 | 28/143 (20%) | ||
LamG | 2399..>2492 | CDD:304605 | 21/108 (19%) | ||
Laminin_G_2 | 2616..2755 | CDD:280389 | 40/148 (27%) | ||
Laminin_G_2 | 2804..2944 | CDD:280389 | 36/141 (26%) | ||
Laminin_G_2 | 3038..3169 | CDD:280389 | 27/132 (20%) | ||
LamG | 3192..3347 | CDD:238058 | 43/155 (28%) | ||
lama4 | XP_002936983.2 | EGF_Lam | 81..120 | CDD:238012 | 19/38 (50%) |
EGF_Lam | 131..186 | CDD:238012 | 22/70 (31%) | ||
EGF_Lam | 188..240 | CDD:238012 | 23/82 (28%) | ||
EGF_Lam | 242..286 | CDD:214543 | 19/95 (20%) | ||
EGF_Lam | 289..333 | CDD:214543 | 20/140 (14%) | ||
Laminin_I | 393..649 | CDD:310534 | 86/613 (14%) | ||
SCP-1 | <519..>837 | CDD:114219 | 92/449 (20%) | ||
Laminin_II | 829..958 | CDD:368703 | 25/139 (18%) | ||
LamG | 975..1106 | CDD:214598 | 32/156 (21%) | ||
LamG | 1143..1299 | CDD:238058 | 50/179 (28%) | ||
LamG | 1329..1466 | CDD:238058 | 41/163 (25%) | ||
LamG | 1582..1714 | CDD:238058 | 27/137 (20%) | ||
LamG | 1743..1889 | CDD:238058 | 42/152 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 57 | 1.000 | Domainoid score | I10734 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |