DRSC/TRiP Functional Genomics Resources

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Protein Alignment wb and XB5969698

DIOPT Version :10

Sequence 1:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster
Sequence 2:NP_001123798.1 Gene:XB5969698 / 100170549 XenbaseID:XB-GENE-5969699 Length:1853 Species:Xenopus tropicalis


Alignment Length:2280 Identity:524/2280 - (22%)
Similarity:787/2280 - (34%) Gaps:722/2280 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 GGLYPPLFN-VVPRAQ-ISVNATCGQNGAEEYC---KQVGAKPCGICNAHSSDRAKQRSIQSLIS 210
            ||.||...| ::.||| :|..:|||...|:|||   ....::.|..|::....:.:...|:::|.
 Frog    51 GGCYPATGNLLIGRAQSLSATSTCGMEEAQEYCIVSHLQDSEKCFACDSRVPYQKESHRIENVIY 115

  Fly   211 SGSGSGSGSGFEEGWWQSPTLQGGRQFEYVTILLDLKQTFQIFSVWLKSANSPRPASWILEKSLD 275
            .     :....|:.||||   :.|  .|.|:|.|||:..|. |:..:....:.|||:.::|:|.|
 Frog   116 L-----TEEDEEKTWWQS---ENG--VESVSIRLDLEAEFH-FTHLIMKFKTFRPAAMLIERSAD 169

  Fly   276 -GINFEPWQYFGLSDADCQRRWNLSGQNGK--YVFQNDTEIICSTQFSKPGPLENGVLHASLLKN 337
             |..::.::||..   :|.:.:     .|.  :..|...:|||..::|...|...|.:...:|. 
 Frog   170 YGRTWKVYRYFSY---NCTKMF-----PGVPIHALQQIDDIICDQRYSDIEPSSEGEVIYKVLD- 225

  Fly   338 RPGATDQSP---ELMKFITTRYIRIRLQGMHSTANQDNSLDWLLDSPSLEKHSFYSLSQLKVSAR 399
             |..|.:.|   |:.:.:....:||....:|:..  ||.||   ..|.:.:..:||:.:|.|...
 Frog   226 -PAITVEDPYSAEIQELLQITNLRINFTKLHTLG--DNLLD---QRPEVLQKYYYSVYELVVRGS 284

  Fly   400 LDCNGHANRSHESPDDPLM---------QCICQHNTCGAQCEQCCPLFQDRPYQMG-----GECE 450
            ..|.|||  |..||.:.:.         :|:|:|:|.|..||||...:.|.|::..     ..|:
 Frog   285 CFCYGHA--SECSPVEGIEAGVEGMIHGRCVCKHHTKGLNCEQCQDFYHDLPWRPAEANDPHTCK 347

  Fly   451 ICQCYGHAESCTYDPFL-------DKGICQSCSNNTAGIECEFCEMGFYRE--LDAPLTDPCLPC 506
            .|.|..|:..|.:|..:       ..|:|..|.:||.|..||.|:..:|::  .|....:.|:.|
 Frog   348 RCNCNNHSRKCHFDMAVYLATGKESGGVCDDCQHNTMGRNCELCKPFYYQDPRADIRADNACISC 412

  Fly   507 SCNPARSTGG--CQSD--------GGSCNCLEGFQGKNCEECAPGYYG---DD---CKRCECDER 555
            .|:|..|..|  |.|.        .|.|.|....:|:.|:.|...:||   :|   |:.|.||.|
 Frog   413 DCDPVGSLDGGVCDSHTNVNLGMIAGQCRCKGNVKGERCDSCKESFYGLSMNDPVGCQPCSCDPR 477

  Fly   556 GSLGSTGSC---SGVCQCKLNVEGSTCSECAPGYFDLSAENAEGCTSCWC--------------- 602
            |.:.....|   ||.|.||..|.|..|::|.|.|:.|| .:..||..|.|               
 Frog   478 GIITGNTPCDQISGDCYCKRFVTGRYCNQCLPEYWGLS-NDITGCRPCDCDFGGAYNNKCSLGDG 541

  Fly   603 ------SGVSQTCHSAKL---------QTLAFETLNDWKITDIQRVKPISIPVDAETNRLIFANE 652
                  :.:.:.|...:|         .|...|.......||.|  .|.|...:|:|:.|.:.|.
 Frog   542 QCDCRSNIIGRQCGDVQLGYFCMPLDYYTYEAENAKGLSPTDPQ--LPGSPKPEAQTDCLEYFNG 604

  Fly   653 LD---EVEAIYWQASLGYLGNRLTSYGSR-LQLVLSWDVIRGDRSGKPTTGPNVILVGKNGLKIA 713
            :.   :|.....:.:...|..|.:...:| ||.....:|||.:.:    :|..|...|:..:::.
 Frog   605 IQNGKKVRLRRQRRTARVLQQRASQRRARQLQQKPDTEVIRREHN----SGHMVTWTGQGFVRVR 665

  Fly   714 FGDESLDGLGINLNVTLTEVGWYHVP-PTVVDIKTRLRRTEGGDYHGESVTRSQFLSVLVSLDAV 777
                  ||.|:...:.       :|| |...||..|.......|:.......|:.|.:......|
 Frog   666 ------DGAGLLFQID-------NVPYPMDYDIMIRYEPESAEDWEATVSVTSRILPMSPRCGNV 717

  Fly   778 LIRAAF------HTD---------------QGETS------------------LERAVIYSGGVE 803
            |.....      ||:               |.|.|                  ::..|:.....|
 Frog   718 LPSEQMYKEKLPHTERYLVLPKPFCFESNNQYEISIRFQRWGAANRHPAAFILIDSLVLLPKIYE 782

  Fly   804 LGG---------KSSSQVEQCLCPAGY------------TGLSCEGCAFGFKRIYENTSDHQILS 847
            |.|         ....::|:.:|...:            ..|.|...|.             |..
 Frog   783 LPGFHGNDPVSVHHREEMERYMCLDSFKMATMPDLAEMCIKLLCSISAI-------------IHD 834

  Fly   848 KCIPCPCN---GHSNSCDLQSGNCGDCMHNTFGDRCERCQLGYYGNPLQGTPNDCKRCAC-PLSE 908
            ..:||.|:   ..|..||...|.| .|..|..|.||::|..|.||    ..|..|.:|.| |...
 Frog   835 GALPCLCDLQGSLSAVCDKIGGQC-KCKPNVIGQRCDQCAPGTYG----FGPYGCSKCDCHPQGS 894

  Fly   909 DS---NNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDDGYFGNPRQPGSS 970
            .|   |.|:..|                         .|.....|..|..|..|.:|.|.     
 Frog   895 TSRLCNPFTGQC-------------------------PCQSNVAGRQCDQCLPGQWGYPH----- 929

  Fly   971 CQRCDCAG--GPCNVTTGECITCRGNTEGWHCERCKLGYWGDPAVG----CDPCHC-------HT 1022
            |:.|.|.|  ..|:..||.||.||.:|.|.|||:|..||:|||.:|    |.||.|       :.
 Frog   930 CRPCVCNGHSDECDSKTGACIRCRDSTTGRHCEKCLDGYYGDPILGSGQQCRPCPCPGYPGSRNY 994

  Fly  1023 EGSESGLC----DSTDGQCLCKPRYAGQKCDECDVGY-ANVEL---RCPSCNC----DPLGSLVQ 1075
            .||.   |    ||....|||.|.|.|.:||.|..|| .|.|.   .|..|.|    ||..   .
 Frog   995 HGSS---CYADKDSHQIVCLCAPGYTGTRCDRCSPGYFGNPEQEGGECRPCQCNNNIDPTD---P 1053

  Fly  1076 DRCDPHTGQC-HCKEGVMGAKCHECQDGYFGMNAVAYRMDDLAALRQNSDSDDDEWELVPDTEDP 1139
            :.||.|:|.| .|.....||.|.||:.|::|           :|:::|                 
 Frog  1054 ESCDSHSGMCMKCLYNTDGAHCEECKAGFYG-----------SAMQRN----------------- 1090

  Fly  1140 NSESTVACEECHCSSVGSLSSD-------CDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCR 1197
                   |..|.|:..|:|.|.       ||:.||.|.|.|||.|:.||:|....||.....||.
 Frog  1091 -------CRRCTCNEQGTLQSHCTRDVCYCDRVTGHCPCRANVLGKSCDQCASNFWNFGGDLGCE 1148

  Fly  1198 DCRCDPHGSRGHECNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQRCSACRSEGQVCDPHNG 1262
            .|.|||..|...:||.:||||.|:.|.||:.|:.|.|.::|                   ||   
 Frog  1149 PCTCDPAHSLRQDCNVFTGQCHCQPGFGGRVCSHCQENYWG-------------------DP--- 1191

  Fly  1263 RCICPKFTRGLGCGQCVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQCQCREGYSGRKCDTC 1327
                                     ::.|..|:||..||...||....|:|.||:|::|::||.|
 Frog  1192 -------------------------QIKCEVCDCDAYGSETAQCDPLTGKCFCRKGFTGQRCDQC 1231

  Fly  1328 AIGY-FGYPECRRCGCDAEGSFTQADGSIACDSNGQCPCKSLVVGLKCDTCMQSTFGLSAQNPEG 1391
            |.|: ..||.|                         .||..                        
 Frog  1232 ARGFQNNYPRC-------------------------LPCHE------------------------ 1247

  Fly  1392 CTRCFCFGRSGECEQSDLSWGHIRMAESRNLSVQQIRPHSVPSSDY-EYIVVVQMEGSSFHREDA 1455
                 ||.      |.|:....:|   .|...|||      ...|: |..|..::..|.....|.
 Frog  1248 -----CFA------QWDMIISQLR---DRLQGVQQ------KLLDFQEGAVAPEISHSQIKELDN 1292

  Fly  1456 EIQRMNDL----------------SLVPKSTGNVSIGAYGQFYHPLYFQLPPQFYGDRTSSYGGF 1504
            :::.:.:|                .||.|.:..|:         .|.|||..|     .....| 
 Frog  1293 KLRTIEELIKDGGADGMRMLEQMTKLVNKISSEVA---------QLSFQLHTQ-----EKQMNG- 1342

  Fly  1505 LYFTLITEGAHKPLERNILGQYPLVQLHAHSKLLLDFYEYEEFEYSLNVTHRVPLHESFWKYHHT 1569
                  || |....:|..|.|           |.||.....|..|.|.|.               
 Frog  1343 ------TE-AKDRWQRGKLDQ-----------LTLDITVVNETVYDLKVQ--------------- 1374

  Fly  1570 SQAVDRNTLMAALQNIRHIFIRAFAFADFQEVVLQNVHMDAAIYIKGSTNLIAKG-VERCKCPKR 1633
                                |.|...|.|.|                |.|.|.|. :|..:..|.
 Frog  1375 --------------------IEAIVAAGFNE----------------SYNSIVKSYLESTEAEKI 1403

  Fly  1634 FDGLSCQDPGRSFYRWRNT-TIVESVFIEDLIGRAAPCHCNGRSSDCDRETGVCQNCRGNTGGDH 1697
            .:| |...||...::.:.| ...|.:..|.|         :....:...:....:..:....|.:
 Frog  1404 ANG-SVYGPGSPVFQSQQTREETERLLKEKL---------DTYKRNMTAQKSSLKELQKKVQGLN 1458

  Fly  1698 CHQCAEGFYGDPNSPHGCQACPCPETNRNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGYFGDP 1762
            ..:..|...|.|.... |:..||...|      |...||:..|                  .|| 
 Frog  1459 VSKINEKICGAPGDQE-CEDSPCGGAN------CRDEDGKRKC------------------GGD- 1497

  Fly  1763 MRYPNTTCQPCNCHPDGIQTEGCDVETGRCYCREGVTGLKCDKCQAERHHLVDNGCKICDNCTLL 1827
                     .||                      |...:..            .......|.||.
 Frog  1498 ---------DCN----------------------GALPVSA------------KALSTAQNITLE 1519

  Fly  1828 LLDYMELVGNKLRR-GMHNMDLTGIPAPYRKLSEYESAYEKWNGRHWDFSQTKRRLQDYDS---- 1887
            |    |.:.|:|:. .....|:.||....:..:|...|..|         ::|||::|...    
 Frog  1520 L----ENMANRLKDIAQKIQDIQGIAQDAKVQTEATLANAK---------ESKRRIEDSTEKLRE 1571

  Fly  1888 -----ADILKLE-AHAENLKFQSRKAV-----ATIGKREFAIKSMREDAVTQQHSVGLL--RSEI 1939
                 .|.|..| |..|:::..:|:.:     |:.|..|..:..::|       |:|.|  ..||
 Frog  1572 FIKKIKDFLTEEGADPESIELVARQVLNISLPASPGDIEALVNKIKE-------SIGNLSCTDEI 1629

  Fly  1940 LQTLSDLHGYGKSAHYLSLPTALKQARFYLQAIREHDQMVQGIRSTNDCAWKHFYAMGNASDASF 2004
            |...|::....|:.|..::     :|:...:|:                       ..|.|||..
 Frog  1630 LTNTSEILATAKNLHKEAV-----EAQAKAEAV-----------------------SANISDAQA 1666

  Fly  2005 ---DESGRLEMLWRDLNQTNHRVVDMRLQVDRVQE----VENEAEDVLEHVRNLSIRVGESHQEL 2062
               :...:.:...:.|.:....:.|::.:|::..:    ||.:..|::|.:.|||.:|.:...:.
 Frog  1667 LLQEAEAKAKSAEKALKKAKQSIKDVKSKVEQTMQTLTGVEQKEMDIMERIGNLSEKVDDLLDKT 1731

  Fly  2063 DELNQRISDHLDPGYLE-QGEGLLRL---TVQRQIMLNGHLNQLDGYRILLNTTLGVKTEQQREV 2123
            :...|..||..:...|. ...|.||.   .|||:  .:....::.||.....|.|. :.|:.:|.
 Frog  1732 ESNRQIASDAKERANLVLNSTGELRKEMDDVQRK--YDDLKEKVGGYNSSSGTALD-RIEKIKEE 1793

  Fly  2124 RKHWLPK---AEKHASHLLA--RSNEYARKFQPTRNGARIAMLASSAHSNITEAINDARLASILA 2183
            .|....|   |:|..:.|.|  |:||        .|.....:......:..|:.:||.|     .
 Frog  1794 AKALYDKANTAKKELAKLEAQFRANE--------ANMTAKILTIEQLENQTTQLLNDIR-----E 1845

  Fly  2184 KERVY 2188
            |..:|
 Frog  1846 KSNIY 1850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wbNP_723870.1 Laminin_N 153..398 CDD:459653 67/255 (26%)
EGF_Lam 401..450 CDD:238012 18/62 (29%)
EGF_Lam 505..552 CDD:238012 18/62 (29%)
Laminin_EGF 550..597 CDD:395007 19/49 (39%)
Laminin_B 660..813 CDD:459652 34/202 (17%)
EGF_Lam 851..900 CDD:238012 18/51 (35%)
Laminin_EGF <943..971 CDD:395007 7/27 (26%)
Laminin_EGF 974..1018 CDD:395007 23/49 (47%)
EGF_Lam 1017..1065 CDD:238012 22/62 (35%)
Laminin_EGF 1065..>1105 CDD:395007 16/44 (36%)
EGF_Lam 1150..1197 CDD:238012 21/53 (40%)
Laminin_EGF 1199..1247 CDD:395007 19/47 (40%)
EGF_Lam 1247..1292 CDD:238012 2/44 (5%)
Laminin_EGF 1294..1342 CDD:395007 21/48 (44%)
Laminin_EGF 1340..1392 CDD:395007 2/51 (4%)
Laminin_B 1486..1626 CDD:459652 27/140 (19%)
EGF_Lam 1669..1716 CDD:238012 4/46 (9%)
Laminin_EGF 1718..1767 CDD:395007 9/48 (19%)
EGF_Lam 1772..1819 CDD:238012 3/46 (7%)
YhaN <1907..2141 CDD:443752 52/256 (20%)
SMC_prok_B <2123..>2390 CDD:274008 16/71 (23%)
Laminin_II 2279..2400 CDD:368703
LamG 2399..>2492 CDD:473984
LamG 2586..2753 CDD:238058
Laminin_G_2 2804..2944 CDD:460494
LamG 3018..3167 CDD:238058
LamG 3192..3347 CDD:238058
XB5969698NP_001123798.1 Laminin_N 53..283 CDD:459653 67/255 (26%)
EGF_Lam 284..337 CDD:238012 18/54 (33%)
Laminin_EGF 349..399 CDD:395007 15/49 (31%)
Laminin_EGF 412..469 CDD:395007 16/56 (29%)
EGF_Lam 471..522 CDD:238012 20/51 (39%)
EGF_Lam 523..>562 CDD:238012 4/38 (11%)
EGF_Lam 839..884 CDD:214543 17/49 (35%)
Laminin_EGF 887..935 CDD:395007 16/77 (21%)
Laminin_EGF 933..980 CDD:395007 22/46 (48%)
Laminin_EGF 983..1039 CDD:395007 20/58 (34%)
Laminin_EGF 1042..>1084 CDD:395007 16/44 (36%)
Laminin_EGF 1094..1147 CDD:395007 20/52 (38%)
Laminin_EGF 1150..1198 CDD:395007 22/94 (23%)
EGF_Lam 1198..1246 CDD:238012 22/72 (31%)
PRK03918 <1285..1846 CDD:235175 145/787 (18%)
cc_LAMB_C 1784..1853 CDD:411969 19/81 (23%)
Blue background indicates that the domain is not in the aligned region.

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