Sequence 1: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012826649.2 | Gene: | lamb3 / 100125073 | XenbaseID: | XB-GENE-983491 | Length: | 1157 | Species: | Xenopus tropicalis |
Alignment Length: | 1468 | Identity: | 296/1468 - (20%) |
---|---|---|---|
Similarity: | 467/1468 - (31%) | Gaps: | 626/1468 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 852 CPCNGHSNSCDLQSG-----NCGD--------CMHNTFGDRCERCQLGYYGNPLQ----GTPNDC 899
Fly 900 KRCACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDDGYFGNP 964
Fly 965 RQPGSSCQRCDCAGGPCNVTTGECITCRGNTEGWHCERCKLGYWGDPAVGCDPCHCHTEGSESGL 1029
Fly 1030 CDSTDGQCLCKPRYAGQKCDECDVGYANVELRCPSCNCDPLGSLVQDRCDPHTGQCHCKEGVMGA 1094
Fly 1095 KCHECQDGYFGMNAVAYRMDDLAALRQNSDSDDDEWELVPDTEDPNSESTVACEECHCSSVG-SL 1158
Fly 1159 SSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKIG 1223
Fly 1224 VGGQHCNECTEGFFGFSTEGCQRCSACRSEGQVCDPHNGRCICPKFTRGLGCGQCVPGTWGWQAR 1288
Fly 1289 LGCRECECDHIGSIGQQCSTGDGQCQCREGYSGRKCDTCAIGYFG-YPECRRCGCDAEGSFTQAD 1352
Fly 1353 GSIACDSNGQCPCKSLVVGLKCDTCMQSTFGLSAQNPEGCTRCFCFGRSGECEQSDLSWGHIRMA 1417
Fly 1418 --ESRNLSVQQIRPHSVPSSDYEYIVVVQMEGSSFHREDAEIQRMNDLSLVPKSTGNVSIGAYGQ 1480
Fly 1481 FYHPLYFQLP-PQFYGDRTSSYGGFLYFTLITEGAHKPLERNI---LGQYPLVQLHAHSKLLLDF 1541
Fly 1542 YEYEEFEYSLNVTHRVPLHESFWKYHHTSQAVDRNTLMAALQNIRHIFIR-AFAFADFQEVVLQN 1605
Fly 1606 VHMDA---AIYIKG-STNLIAKGVERCKCPKRFDGLSCQDPGRSFYRWRNTTIVESVFIEDLIGR 1666
Fly 1667 AAPCHCNGRSSDCDRETGVCQNCRGNTGGDHCHQCAEGFYGDPNSPHGCQACPCPETNRNFARGC 1731
Fly 1732 NVWDGEVSCVCKPGYTGRLCERCQAGYF---GDPMRYPNTTCQPCNCHPDGIQTEGCDVETGRCY 1793
Fly 1794 CREGVTGLKCDKCQAERHHLVDNGCKICDNCTLLLLDYMELVGNKLRRGMHNMDLTGIPAPYRKL 1858
Fly 1859 SEYESAYEKWNGRHWDFSQTKRRLQDYD---SADILKLEAHAENLKFQSRKAVATIGKREFAIKS 1920
Fly 1921 MREDAVTQQHSVGLLRSEILQTLSDLHGYGKSAHYLSLPTALKQARFYLQAIREHDQMVQGIRST 1985
Fly 1986 NDCAWKHFYAMGNASDASFDESGRLEMLWRDLNQTNHRVVDMRLQVDRVQEVENEAEDVLEHVRN 2050
Fly 2051 LSIRVGESHQELDELNQRISDHLDPGYLEQGEGLLRLTVQRQIMLNGHLNQLDGYRILLNTTLGV 2115
Fly 2116 KTEQQREVRKHWLPKAEKHASHLLARSNEYARKF--------QPTRNGARIAMLASSAHSNITEA 2172
Fly 2173 INDARLASILAKERVYEAQRTLY---------PSDGSSMIERAKHSLHRSKQLQQEALKQMHKSN 2228
Fly 2229 VLKDKLHRQEQ-------QVEGIKSTIYDSGLRTNNIS 2259 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | |
EGF_Lam | 401..450 | CDD:238012 | |||
TNFRSF | <407..507 | CDD:304602 | |||
EGF_Lam | 505..552 | CDD:238012 | |||
Laminin_EGF | 550..597 | CDD:278482 | |||
Laminin_B | 660..798 | CDD:278481 | |||
EGF_Lam | 851..900 | CDD:238012 | 21/64 (33%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 0/27 (0%) | ||
VSP | 953..1414 | CDD:146106 | 119/462 (26%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 14/43 (33%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 2/47 (4%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 20/39 (51%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | 24/47 (51%) | ||
Laminin_EGF | 1199..1247 | CDD:278482 | 18/47 (38%) | ||
EGF_Lam | 1247..1292 | CDD:238012 | 1/44 (2%) | ||
Laminin_EGF | 1294..1342 | CDD:278482 | 21/48 (44%) | ||
Laminin_EGF | 1340..1392 | CDD:278482 | 8/51 (16%) | ||
Laminin_B | 1486..1611 | CDD:278481 | 21/132 (16%) | ||
EGF_Lam | 1669..1716 | CDD:238012 | 6/46 (13%) | ||
Laminin_EGF | 1718..1767 | CDD:278482 | 13/51 (25%) | ||
EGF_Lam | 1772..1819 | CDD:238012 | 0/46 (0%) | ||
CrfC | <1933..2267 | CDD:223771 | 62/351 (18%) | ||
Laminin_II | 2277..2400 | CDD:283628 | |||
LamG | 2399..>2492 | CDD:304605 | |||
Laminin_G_2 | 2616..2755 | CDD:280389 | |||
Laminin_G_2 | 2804..2944 | CDD:280389 | |||
Laminin_G_2 | 3038..3169 | CDD:280389 | |||
LamG | 3192..3347 | CDD:238058 | |||
lamb3 | XP_012826649.2 | Laminin_N | 26..244 | CDD:395009 | |
EGF_Lam | 245..302 | CDD:238012 | 19/56 (34%) | ||
EGF_Lam | 311..369 | CDD:238012 | 22/154 (14%) | ||
Laminin_EGF | 375..424 | CDD:395007 | 22/81 (27%) | ||
Laminin_EGF | 427..474 | CDD:395007 | 23/46 (50%) | ||
Laminin_EGF | 477..525 | CDD:395007 | 21/94 (22%) | ||
EGF_Lam | 525..569 | CDD:214543 | 18/43 (42%) | ||
Smc | <815..1149 | CDD:224117 | 80/523 (15%) | ||
cc_LAMB_C | 1087..1157 | CDD:424069 | 15/64 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 53 | 1.000 | Domainoid score | I11227 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |