Sequence 1: | NP_524660.1 | Gene: | sbr / 43944 | FlyBaseID: | FBgn0003321 | Length: | 672 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031756030.1 | Gene: | nxf1 / 734058 | XenbaseID: | XB-GENE-489552 | Length: | 627 | Species: | Xenopus tropicalis |
Alignment Length: | 708 | Identity: | 223/708 - (31%) |
---|---|---|---|
Similarity: | 332/708 - (46%) | Gaps: | 132/708 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 VGNGGGRYNAPEDF-------DD-----FDVEDRQRRKDRNKRRVSFKPSQCLHNKKDIKLRPED 68
Fly 69 LRRWDEDDDMSDMTTAVKD-RPTSRRRGSPIPRG------KFGKLMPNSFG-------------- 112
Fly 113 ------WYQVTLQNAQIYEKETLLSALLAAMS-PHVFIPQYWRVERNCVIFFTDDYEAAERIQHL 170
Fly 171 GKNGHLPDGYRLMPRVRSGIP----LVAIDDAFKEKMKVTMAKRYNIQTKALDLSRFHADPDL-- 229
Fly 230 KQVFCPLFRQNVMGAAIDIMCDNIPDLEALNLNDNSISSMEAFKGVEKRLPNLKILYLGDNKIPS 294
Fly 295 LAHLVVLRNLSILELVLKNNPCRSRYKDSQQFISEVRRKFPKLVKLDGETLEPQITFDLSEQGRL 359
Fly 360 LETKASYLCDVAGAEVVRQFLDQYFRIFDSGNRQALLDAYHEKAMLSISMPS----ASQAGRLNS 420
Fly 421 FWKFNRNLRRLLNGEENRTRNLKYGRLACVSTLDEWPKTQHDRRTFTVDLTIYNTSMMVFTVTGL 485
Fly 486 FKELNDETNNPASMELYDVRHFARTYVVVP-QNNGFCIRNETIFITNATHEQVREFKRSQHQPAP 549
Fly 550 GAMPSTSSAVTSPQAGAAAGLQGRLNALGVATGPVAILSGDPLAATAPVNSGSAAISTTAVAPGA 614
Fly 615 QDESTKMQMIEAMSAQSQMNVIWSRKCLEETNWDFNHAAFVFEKLFKENKIPPEAFMK 672 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sbr | NP_524660.1 | Tap-RNA_bind | 112..191 | CDD:286271 | 23/99 (23%) |
leucine-rich repeat | 215..255 | CDD:275382 | 14/41 (34%) | ||
LRR_RI | <223..341 | CDD:238064 | 40/119 (34%) | ||
LRR_8 | 256..315 | CDD:290566 | 17/58 (29%) | ||
LRR_4 | 256..298 | CDD:289563 | 12/41 (29%) | ||
leucine-rich repeat | 256..281 | CDD:275382 | 3/24 (13%) | ||
leucine-rich repeat | 282..305 | CDD:275382 | 8/22 (36%) | ||
leucine-rich repeat | 306..336 | CDD:275382 | 11/29 (38%) | ||
NTF2 | 372..531 | CDD:238403 | 60/163 (37%) | ||
Big_3_5 | <578..>614 | CDD:293246 | 5/35 (14%) | ||
TAP_C | 609..671 | CDD:197882 | 26/61 (43%) | ||
nxf1 | XP_031756030.1 | Tap-RNA_bind | 123..204 | CDD:401194 | 22/82 (27%) |
leucine-rich repeat | 231..273 | CDD:275382 | 14/41 (34%) | ||
LRR_8 | 272..334 | CDD:404697 | 19/61 (31%) | ||
leucine-rich repeat | 274..299 | CDD:275382 | 3/24 (13%) | ||
leucine-rich repeat | 300..323 | CDD:275382 | 8/22 (36%) | ||
leucine-rich repeat | 324..354 | CDD:275382 | 11/29 (38%) | ||
NTF2_like | 389..540 | CDD:415585 | 57/158 (36%) | ||
TAP_C | 564..626 | CDD:197882 | 31/116 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 109 | 1.000 | Domainoid score | I6311 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H38176 | |
Inparanoid | 1 | 1.050 | 260 | 1.000 | Inparanoid score | I3032 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1051093at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000862 | |
OrthoInspector | 1 | 1.000 | - | - | otm48532 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10662 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R710 |
SonicParanoid | 1 | 1.000 | - | - | X1267 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 9.190 |