| Sequence 1: | NP_524660.1 | Gene: | sbr / 43944 | FlyBaseID: | FBgn0003321 | Length: | 672 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001093156.1 | Gene: | NXF2B / 728343 | HGNCID: | 23984 | Length: | 626 | Species: | Homo sapiens |
| Alignment Length: | 692 | Identity: | 190/692 - (27%) |
|---|---|---|---|
| Similarity: | 313/692 - (45%) | Gaps: | 121/692 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3 KRGGGSSQRYN-----NNVGNGGGRYNAPEDF---DDFDVEDRQRRKDRNKRRVSFKPSQCLHNK 59
Fly 60 KDIKLRPEDLRRWDEDDDMSDMTTAVKDRPTSRRRGSPIPRGKFGKLMPNSF--GWYQVTLQNAQ 122
Fly 123 IYEKETLLSALLAAMSPHVFIPQYWRVERNCVIFFTDDYEAAERIQHLGKNGHLPDGYRLMPRVR 187
Fly 188 SGIPLVAIDDAFK----EKMKVTMAKRYNIQTKALDLSRFHADPDL--KQVFCPLFRQNVMGAAI 246
Fly 247 DIMCDNIPDLEALNLNDNSISSMEAFKGVEKRLPNLKILYLGDNKIPSLAHLVVLRNLSILELVL 311
Fly 312 KNNPCRSRYKDSQQFISEVRRKFPKLVKLDGETLEPQITFDLSEQGRLLETKASYLCDVAGAEVV 376
Fly 377 RQFLDQYFRIFDSGNRQALLDAYHEKAMLSISM---PSASQAGRLNSFWKFNRNLRRL----LNG 434
Fly 435 EENRTRNLKYGRLACVSTLDEWPKTQHDRRTFTVDLTIYNTSMMVFTVTGLFKELNDETNNPASM 499
Fly 500 ELYDVRHFARTYVVVP-QNNGFCIRNETIFITNATHEQVREFKRSQHQPAPGAMPSTSSAVTSPQ 563
Fly 564 AGAAAGLQGRLNALGVATGPVAILSGDPLAATAPVNSGSAAISTTAVAPGAQDESTKMQMIEAMS 628
Fly 629 AQSQMNVIWSRKCLEETNWDFNHAAFVFEKLFKENKIPPEAF 670 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| sbr | NP_524660.1 | Tap-RNA_bind | 112..191 | CDD:286271 | 17/78 (22%) |
| leucine-rich repeat | 215..255 | CDD:275382 | 15/41 (37%) | ||
| LRR_RI | <223..341 | CDD:238064 | 39/119 (33%) | ||
| LRR_8 | 256..315 | CDD:290566 | 17/58 (29%) | ||
| LRR_4 | 256..298 | CDD:289563 | 12/41 (29%) | ||
| leucine-rich repeat | 256..281 | CDD:275382 | 5/24 (21%) | ||
| leucine-rich repeat | 282..305 | CDD:275382 | 7/22 (32%) | ||
| leucine-rich repeat | 306..336 | CDD:275382 | 10/29 (34%) | ||
| NTF2 | 372..531 | CDD:238403 | 55/166 (33%) | ||
| Big_3_5 | <578..>614 | CDD:293246 | 6/35 (17%) | ||
| TAP_C | 609..671 | CDD:197882 | 23/62 (37%) | ||
| NXF2B | NP_001093156.1 | Tap-RNA_bind | 121..203 | CDD:312616 | 17/82 (21%) |
| leucine-rich repeat | 229..271 | CDD:275382 | 15/41 (37%) | ||
| LRR_8 | 270..332 | CDD:316378 | 19/61 (31%) | ||
| LRR 1 | 271..296 | 5/24 (21%) | |||
| leucine-rich repeat | 272..297 | CDD:275382 | 5/24 (21%) | ||
| LRR 2 | 297..320 | 7/22 (32%) | |||
| leucine-rich repeat | 298..321 | CDD:275382 | 7/22 (32%) | ||
| LRR 3 | 321..348 | 8/26 (31%) | |||
| leucine-rich repeat | 322..352 | CDD:275382 | 10/29 (34%) | ||
| LRR 4 | 349..376 | 9/26 (35%) | |||
| NTF2_like | 391..543 | CDD:324324 | 55/163 (34%) | ||
| TAP_C | 570..623 | CDD:197882 | 23/53 (43%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 114 | 1.000 | Domainoid score | I6066 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 277 | 1.000 | Inparanoid score | I2942 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1051093at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000862 | |
| OrthoInspector | 1 | 1.000 | - | - | otm41330 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102057 | |
| Panther | 1 | 1.100 | - | - | O | PTHR10662 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X1267 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 10 | 9.970 | |||||